RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 GATAD1Q8WUU5 269 aa8.57□□□□□ -1.04
NUP50-216ENST00000486184 GLMPQ8WWB7 406 aa8.57□□□□□ -1.04
NUP50-216ENST00000486184 GNPNAT1Q96EK6 184 aaPredicted RBP8.57□□□□□ -1.04
NUP50-216ENST00000486184 SHANK2-AS3Q9BTD1 123 aa8.57□□□□□ -1.04
NUP50-216ENST00000486184 SCRT1Q9BWW7 348 aa8.57□□□□□ -1.04
NUP50-216ENST00000486184 AURKAIP1Q9NWT8 199 aaPredicted RBP8.57□□□□□ -1.04
NUP50-216ENST00000486184 TIMM9Q9Y5J7 89 aa8.57□□□□□ -1.04
NUP50-216ENST00000486184 NBEAL1Q6ZS30 2694 aa8.57□□□□□ -1.04
NUP50-216ENST00000486184 ZNF785A8K8V0 405 aa8.56□□□□□ -1.04
NUP50-216ENST00000486184 BCL2L11O43521 198 aa8.56□□□□□ -1.04
NUP50-216ENST00000486184 PRB2P02812 416 aaPredicted RBP8.56□□□□□ -1.04
NUP50-216ENST00000486184 RPL7P18124 248 aaKnown RBP8.56□□□□□ -1.04
NUP50-216ENST00000486184 C4BPBP20851 252 aa8.56□□□□□ -1.04
NUP50-216ENST00000486184 EIF5AP63241 154 aaKnown RBP8.56□□□□□ -1.04
NUP50-216ENST00000486184 ACOT6Q3I5F7 207 aaPredicted RBP8.56□□□□□ -1.04
NUP50-216ENST00000486184 FAM90A2PQ658T7 463 aa8.56□□□□□ -1.04
NUP50-216ENST00000486184 LEMD1Q68G75 181 aa8.56□□□□□ -1.04
NUP50-216ENST00000486184 PATE2Q6UY27 113 aa8.56□□□□□ -1.04
NUP50-216ENST00000486184 WFDC3Q8IUB2 231 aa8.56□□□□□ -1.04
NUP50-216ENST00000486184 PSMG3Q9BT73 122 aaPredicted RBP8.56□□□□□ -1.04
NUP50-216ENST00000486184 SLC25A32Q9H2D1 315 aa8.56□□□□□ -1.04
NUP50-216ENST00000486184 MS4A6AQ9H2W1 248 aa8.56□□□□□ -1.04
NUP50-216ENST00000486184 NRN1Q9NPD7 142 aa8.56□□□□□ -1.04
NUP50-216ENST00000486184 NOTCH1P46531 2555 aa8.55□□□□□ -1.04
NUP50-216ENST00000486184 TRAV2A0A0B4J234 112 aa8.55□□□□□ -1.04
NUP50-216ENST00000486184 CXCL2P19875 107 aa8.55□□□□□ -1.04
NUP50-216ENST00000486184 ATP6V0CP27449 155 aa8.55□□□□□ -1.04
NUP50-216ENST00000486184 CMC4P56277 68 aaPredicted RBP8.55□□□□□ -1.04
NUP50-216ENST00000486184 DEFA6Q01524 100 aa8.55□□□□□ -1.04
NUP50-216ENST00000486184 FAM78BQ5VT40 261 aa8.55□□□□□ -1.04
NUP50-216ENST00000486184 TMUB2Q71RG4 321 aa8.55□□□□□ -1.04
NUP50-216ENST00000486184 BPIFA4PQ86YQ2 179 aa8.55□□□□□ -1.04
NUP50-216ENST00000486184 TMEM37Q8WXS4 190 aa8.55□□□□□ -1.04
NUP50-216ENST00000486184 ZNF471Q9BX82 626 aaPredicted RBP8.55□□□□□ -1.04
NUP50-216ENST00000486184 MRPL32Q9BYC8 188 aaKnown RBP8.55□□□□□ -1.04
NUP50-216ENST00000486184 A0A1W2PPV4 95 aa8.54□□□□□ -1.04
NUP50-216ENST00000486184 MBP02144 154 aa8.54□□□□□ -1.04
NUP50-216ENST00000486184 ID1P41134 155 aa8.54□□□□□ -1.04
NUP50-216ENST00000486184 MEOX2P50222 304 aa8.54□□□□□ -1.04
NUP50-216ENST00000486184 RHOBP62745 196 aa8.54□□□□□ -1.04
NUP50-216ENST00000486184 SERF2P84101 59 aa8.54□□□□□ -1.04
NUP50-216ENST00000486184 DEFB121Q5J5C9 76 aa8.54□□□□□ -1.04
NUP50-216ENST00000486184 SAMD13Q5VXD3 122 aa8.54□□□□□ -1.04
NUP50-216ENST00000486184 LRRC20Q8TCA0 184 aa8.54□□□□□ -1.04
NUP50-216ENST00000486184 MRAPQ8TCY5 172 aa8.54□□□□□ -1.04
NUP50-216ENST00000486184 CMYA5Q8N3K9 4069 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 OR11H12B2RN74 326 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 CD7P09564 240 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 M6PRP20645 277 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 TAS2R45P59539 299 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 SNRPD3P62318 126 aaKnown RBP8.53□□□□□ -1.04
NUP50-216ENST00000486184 CD300CQ08708 224 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 GCSAMLQ5JQS6 135 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 OR10G4Q8NGN3 311 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 OR10G9Q8NGN4 311 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 OR10G7Q8NGN6 311 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 OR2G3Q8NGZ4 309 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 SH3BGRL3Q9H299 93 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 UBQLN2Q9UHD9 624 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 FUT9Q9Y231 359 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 SMAD5-AS1Q9Y6J3 95 aa8.53□□□□□ -1.04
NUP50-216ENST00000486184 K7EQG2 157 aa8.52□□□□□ -1.05
NUP50-216ENST00000486184 TPT1P13693 172 aaKnown RBP8.52□□□□□ -1.05
NUP50-216ENST00000486184 RAB2AP61019 212 aa8.52□□□□□ -1.05
NUP50-216ENST00000486184 KHDC3LQ587J8 217 aa8.52□□□□□ -1.05
NUP50-216ENST00000486184 AKR1C8PQ5T2L2 129 aa8.52□□□□□ -1.05
NUP50-216ENST00000486184 FAM122CQ6P4D5 195 aa8.52□□□□□ -1.05
NUP50-216ENST00000486184 C16orf92Q96LL3 132 aa8.52□□□□□ -1.05
NUP50-216ENST00000486184 TUBA4BQ9H853 241 aa8.52□□□□□ -1.05
NUP50-216ENST00000486184 SEPSECSQ9HD40 501 aaKnown RBP8.52□□□□□ -1.05
NUP50-216ENST00000486184 CYTL1Q9NRR1 136 aa8.52□□□□□ -1.05
NUP50-216ENST00000486184 RFNGQ9Y644 331 aa8.52□□□□□ -1.05
NUP50-216ENST00000486184 TRAV5A0A0B4J249 113 aa8.51□□□□□ -1.05
NUP50-216ENST00000486184 K7EIL1 84 aa8.51□□□□□ -1.05
NUP50-216ENST00000486184 OR7C2O60412 319 aa8.51□□□□□ -1.05
NUP50-216ENST00000486184 ZNF688P0C7X2 276 aa8.51□□□□□ -1.05
NUP50-216ENST00000486184 CDC34P49427 236 aaPredicted RBP8.51□□□□□ -1.05
NUP50-216ENST00000486184 LGALSLQ3ZCW2 172 aaPredicted RBP8.51□□□□□ -1.05
NUP50-216ENST00000486184 TMEM41BQ5BJD5 291 aa8.51□□□□□ -1.05
NUP50-216ENST00000486184 MORN5Q5VZ52 161 aa8.51□□□□□ -1.05
NUP50-216ENST00000486184 MIR17HGQ75NE6 70 aa8.51□□□□□ -1.05
NUP50-216ENST00000486184 DCANP1Q8TF63 244 aa8.51□□□□□ -1.05
NUP50-216ENST00000486184 MAP6D1Q9H9H5 199 aa8.51□□□□□ -1.05
NUP50-216ENST00000486184 A0A087X0K7 114 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 ISLRO14498 428 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 SPP1P10451 314 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 PSMB3P49720 205 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 DEFB131AP59861 70 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 GUK1Q16774 197 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 ODF3L2Q3SX64 289 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 PSMG4Q5JS54 123 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 SPATA31B1PQ5VZV4 182 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 EIF5AL1Q6IS14 154 aaKnown RBP8.5□□□□□ -1.05
NUP50-216ENST00000486184 LCN15Q6UWW0 184 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 BAP18Q8IXM2 172 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 Q8N1Y9 231 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 DEFB125Q8N687 156 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 LINC00052Q96N35 136 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 FAM110AQ9BQ89 295 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms