RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 OR8I2Q8N0Y5 310 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 C12orf45Q8N5I9 185 aaPredicted RBP5.09□□□□□ -1.59
VPS50-218ENST00000485994 OR1B1Q8NGR6 318 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 CHAC2Q8WUX2 184 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 SAV1Q9H4B6 383 aaPredicted RBP5.09□□□□□ -1.59
VPS50-218ENST00000485994 C11orf1Q9H5F2 150 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 PAIP2BQ9ULR5 123 aaKnown RBP5.09□□□□□ -1.59
VPS50-218ENST00000485994 KLK5Q9Y337 293 aaPredicted RBP5.09□□□□□ -1.59
VPS50-218ENST00000485994 HLA-DRB4X5D2U9 266 aa5.09□□□□□ -1.59
VPS50-218ENST00000485994 FAM240BA0A1B0GVZ2 78 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 SMIM9A6NGZ8 99 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 KNCNA6PVL3 124 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 GALR1P47211 349 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 OR2F1Q13607 317 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 ACTL10Q5JWF8 245 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 MZT2BQ6NZ67 158 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 TEPPQ6URK8 271 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 ZNF705AQ6ZN79 300 aaPredicted RBP5.08□□□□□ -1.6
VPS50-218ENST00000485994 FOXI2Q6ZQN5 318 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 NRARPQ7Z6K4 114 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 Q8NAQ8 132 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 C11orf45Q8TAV5 145 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 C2orf50Q96LR7 162 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 C17orf77Q96MU5 243 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 NUDT15Q9NV35 164 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 GSKIPQ9P0R6 139 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 RCL1Q9Y2P8 373 aaKnown RBP5.08□□□□□ -1.6
VPS50-218ENST00000485994 X6R8D5 127 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 ALMS1Q8TCU4 4167 aa5.08□□□□□ -1.6
VPS50-218ENST00000485994 TRAV6A0A075B6T7 132 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 A0A0J9YX75 114 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 C11orf94C9JXX5 98 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 H3BP45 60 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 H3BRN7 92 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 SSSCA1O60232 199 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 HYPMO75409 117 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 METTL15P1P0C7V9 234 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 RPL7P18124 248 aaKnown RBP5.07□□□□□ -1.6
VPS50-218ENST00000485994 ORM2P19652 201 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 GATA2P23769 480 aaPredicted RBP5.07□□□□□ -1.6
VPS50-218ENST00000485994 RAP2BP61225 183 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 AKR1C1Q04828 323 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 ATP6V1FQ16864 119 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 CDPF1Q6NVV7 123 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 PHLDA1Q8WV24 401 aaPredicted RBP5.07□□□□□ -1.6
VPS50-218ENST00000485994 SEC22CQ9BRL7 303 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 MARVELD1Q9BSK0 173 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 SHANK2-AS3Q9BTD1 123 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 RSG1Q9BU20 258 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 TMEM147Q9BVK8 224 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 SLC25A39Q9BZJ4 359 aaPredicted RBP5.07□□□□□ -1.6
VPS50-218ENST00000485994 RPRMQ9NS64 109 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 MGAT4CQ9UBM8 478 aa5.07□□□□□ -1.6
VPS50-218ENST00000485994 A0A087X0K7 114 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 TMEM189A5PLL7 270 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 CXorf65A6NEN9 183 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 ZNF705FA8MVS1 300 aaPredicted RBP5.06□□□□□ -1.6
VPS50-218ENST00000485994 MRPS12O15235 138 aaKnown RBP5.06□□□□□ -1.6
VPS50-218ENST00000485994 PRAF2O60831 178 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 CCNKO75909 580 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 ZNF705DP0CH99 300 aaPredicted RBP5.06□□□□□ -1.6
VPS50-218ENST00000485994 ZNF705BP0CI00 300 aaPredicted RBP5.06□□□□□ -1.6
VPS50-218ENST00000485994 RBMY1A1P0DJD3 496 aaKnown RBP5.06□□□□□ -1.6
VPS50-218ENST00000485994 RBMY1CP0DJD4 496 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 PVALBP20472 110 aaPredicted RBP5.06□□□□□ -1.6
VPS50-218ENST00000485994 C4BPBP20851 252 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 S100A11P31949 105 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 CYCSP99999 105 aaKnown RBP5.06□□□□□ -1.6
VPS50-218ENST00000485994 ARL16Q0P5N6 197 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 RBMY1FQ15415 496 aaKnown RBP5.06□□□□□ -1.6
VPS50-218ENST00000485994 VWC2Q2TAL6 325 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 EBLN2Q6P2I7 272 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 GSG1LQ6UXU4 331 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 PATE2Q6UY27 113 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 PPP1R14BQ96C90 147 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 KRTAP9-3Q9BYQ3 159 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 SLC25A32Q9H2D1 315 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 LYRM2Q9NU23 88 aaPredicted RBP5.06□□□□□ -1.6
VPS50-218ENST00000485994 CLEC5AQ9NY25 188 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 HIGD1AQ9Y241 93 aa5.06□□□□□ -1.6
VPS50-218ENST00000485994 IGHV4-28A0A0C4DH34 117 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 SMCO3A2RU48 225 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 C5orf51A6NDU8 294 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 L7N2F9 121 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 GOSR2O14653 212 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 AGPAT2O15120 278 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 DUSP14O95147 198 aaKnown RBP5.05□□□□□ -1.6
VPS50-218ENST00000485994 SCGB1D2O95969 90 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 AMBPP02760 352 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 LINC00869P0C866 280 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 CXCL2P19875 107 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 RPL29P47914 159 aaKnown RBP5.05□□□□□ -1.6
VPS50-218ENST00000485994 SULT1A1P50225 295 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 B2MP61769 119 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 VAMP2P63027 116 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 PSG9Q00887 426 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 RAB31Q13636 194 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 GDF5OSQ5U4N7 250 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 LGALS9CQ6DKI2 356 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms