RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 RUSC1-AS1Q66K80 236 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 LYPD1Q8N2G4 141 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 OVOL2Q9BRP0 275 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 VWC2LB2RUY7 222 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 EFNA2O43921 213 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 EDA2RQ9HAV5 297 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 KLF12Q9Y4X4 402 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 A8MWV9 139 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 RHODO00212 210 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 TCRAP04437 139 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 ADMP35318 185 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 CSRP3P50461 194 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 PSG3Q16557 428 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 LYZL1Q6UWQ5 148 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 LYPD2Q6UXB3 125 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 DNAJC30Q96LL9 226 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 A0A1B0GV72 72 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 PRB4P10163 310 aaPredicted RBP8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 PRIMA1Q86XR5 153 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 C14orf178Q8N769 122 aaPredicted RBP8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 CSTL1Q9H114 145 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 PLXNA1Q9UIW2 1896 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 NKAPP1Q8N9T2 125 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 DIDO1Q9BTC0 2240 aaKnown RBP8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 MYO7BQ6PIF6 2116 aa8.62□□□□□ -1.03
SRGAP3-207ENST00000485983 NCR2O95944 276 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 SSBP2P81877 361 aaPredicted RBP8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 TMEM170AQ8WVE7 144 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 PTPRFP10586 1907 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 WDR90Q96KV7 1748 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 RNF222A6NCQ9 220 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 ITGB1BP1O14713 200 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 SH2D1AO60880 128 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 TBX6O95947 436 aaPredicted RBP8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 HOXD3P31249 432 aaPredicted RBP8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 LAIR2Q6ISS4 152 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 LY6G5BQ8NDX9 201 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 A0A1B0GV90 55 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 ARFGEF3Q5TH69 2177 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 Q8TAT8 98 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 LIME1Q9H400 295 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 CLDN16Q9Y5I7 305 aa8.61□□□□□ -1.03
SRGAP3-207ENST00000485983 D6R8Y8 96 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 PRR30Q53SZ7 412 aaPredicted RBP8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 DEFB104AQ8WTQ1 72 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 PRB1P04280 392 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 ZNF562Q6V9R5 426 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 OTOFQ9HC10 1997 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 DERL1Q9BUN8 251 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 RNF126Q9BV68 326 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 TRBV25-1A0A075B6N4 114 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 ORAOV1Q8WV07 137 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 SNHG12Q9BXW3 62 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 THADAQ6YHU6 1953 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 A0A087WWL8 130 aa8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 HIST1H4AP62805 103 aaKnown RBP8.6□□□□□ -1.03
SRGAP3-207ENST00000485983 GAGE12JA6NER3 117 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 LYPD3O95274 346 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 GAGE1Q13065 139 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 GAGE4Q13068 117 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 GAGE5Q13069 117 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 GAGE13Q4V321 117 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 TRPT1Q86TN4 253 aaKnown RBP8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 ZNF479Q96JC4 524 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 LAMTOR2Q9Y2Q5 125 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 IGKV1D-17A0A075B6S4 117 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 IGKV1D-8A0A087WSZ0 117 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 A0A0A6YYD4 124 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 GAS1P54826 345 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 CFHR3Q02985 330 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 SCN8AQ9UQD0 1980 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 IGFL4Q6B9Z1 124 aa8.59□□□□□ -1.03
SRGAP3-207ENST00000485983 TRAV3A0A0B4J244 114 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 TIMM21Q9BVV7 248 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 ATP6V0E1O15342 81 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 SPATA31B1PQ5VZV4 182 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 DOCK10Q96BY6 2186 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 MPZP25189 248 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 HSD52Q0P140 79 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 IGHV2-70DA0A0C4DH43 119 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 A8MXK9 166 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 IFITM2Q01629 132 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 ZNF362Q5T0B9 420 aaPredicted RBP8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 C1QL4Q86Z23 238 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 F8VVB4 439 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 F8VWA3 439 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 VWC2Q2TAL6 325 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 MGST2Q99735 147 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 REG4Q9BYZ8 158 aa8.58□□□□□ -1.04
SRGAP3-207ENST00000485983 C1orf122Q6ZSJ8 110 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 ARID2Q68CP9 1835 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 IGKV1-27A0A075B6S5 117 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 AZU1P20160 251 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 CRIPAKQ8N1N5 446 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 MRAPQ8TCY5 172 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 FNDC4Q9H6D8 234 aaPredicted RBP8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 SPTAN1Q13813 2472 aaKnown RBP8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 GAGE12BA1L429 117 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 KNCNA6PVL3 124 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 GAGE7O76087 117 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms