RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 SELENOWP63302 87 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 MRPS10P82664 201 aaKnown RBP1.78□□□□□ -2.12
VPS41-213ENST00000485955 HIST1H1AQ02539 215 aaPredicted RBP1.78□□□□□ -2.12
VPS41-213ENST00000485955 GNA12Q03113 381 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 LOXL1Q08397 574 aaPredicted RBP1.78□□□□□ -2.12
VPS41-213ENST00000485955 DHRS2Q13268 280 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 ENDOGQ14249 297 aaKnown RBP1.78□□□□□ -2.12
VPS41-213ENST00000485955 ELOCQ15369 112 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 OR8G1Q15617 311 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 LINC00303Q3SY05 128 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 TMEM69Q5SWH9 247 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 HES3Q5TGS1 186 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 HRCT1Q6UXD1 115 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 BRD3OSQ6XYD6 125 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 DEFB128Q7Z7B8 93 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 MARCH3Q86UD3 253 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 TCTE3Q8IZS6 198 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 ZNF664Q8N3J9 261 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 TMEM229BQ8NBD8 167 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 NUP35Q8NFH5 326 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 OR2M3Q8NG83 312 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 OR4E2Q8NGC2 313 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 OR1J4Q8NGS1 313 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 SLC25A40Q8TBP6 338 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 FAM57AQ8TBR7 257 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 LMX1AQ8TE12 382 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 ISOC1Q96CN7 298 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 PPP3R2Q96LZ3 170 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 ERMAPQ96PL5 475 aaPredicted RBP1.78□□□□□ -2.12
VPS41-213ENST00000485955 CCL13Q99616 98 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 CHAC1Q9BUX1 264 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 ZNF471Q9BX82 626 aaPredicted RBP1.78□□□□□ -2.12
VPS41-213ENST00000485955 OR2H1Q9GZK4 316 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 TMEM38BQ9NVV0 291 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 FBXL12Q9NXK8 326 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 LAMTOR3Q9UHA4 124 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 RPUSD1Q9UJJ7 312 aaKnown RBP1.78□□□□□ -2.12
VPS41-213ENST00000485955 DNAJC12Q9UKB3 198 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 TRAPPC2LQ9UL33 140 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 HIGD1AQ9Y241 93 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 CYSLTR1Q9Y271 337 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 LAMTOR2Q9Y2Q5 125 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 RYR2Q92736 4967 aa1.78□□□□□ -2.12
VPS41-213ENST00000485955 PTPRBP23467 1997 aa1.78□□□□□ -2.13
VPS41-213ENST00000485955 MYH3P11055 1940 aa1.78□□□□□ -2.13
VPS41-213ENST00000485955 COL6A5A8TX70 2615 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 UQCRHLA0A096LP55 91 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 LOC102724200A0A096LPH7 203 aaPredicted RBP1.77□□□□□ -2.13
VPS41-213ENST00000485955 IGHV3-74A0A0B4J1X5 117 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 TRAV5A0A0B4J249 113 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 IGHV3-66A0A0C4DH42 116 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 A0A1B0GVG6 124 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 A0A1B0GW64 132 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 TMEM72A0PK05 275 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 DPRXA6NFQ7 191 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 PCNX2A6NKB5 2137 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 FABP5P3A8MUU1 101 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 LOC730098B7Z3J9 87 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 INS-IGF2F8WCM5 200 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 M0R2Z0 102 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 COX7A2LO14548 114 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 OR7C2O60412 319 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 GGCTO75223 188 aaKnown RBP1.77□□□□□ -2.13
VPS41-213ENST00000485955 IGLV3-27P01718 113 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 OPN1SWP03999 348 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 HLA-DQB2P05538 268 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 UQCRHP07919 91 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 SCTP09683 121 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 LINC00869P0C866 280 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 SMIM10L2AP0DMW4 78 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 SMIM10L2BP0DMW5 78 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 S100A11P31949 105 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 CCR2P41597 374 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 RPS25P62851 125 aaKnown RBP1.77□□□□□ -2.13
VPS41-213ENST00000485955 SLC38A11Q08AI6 406 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 SYCNQ0VAF6 134 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 GLYATL3Q5SZD4 288 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 MRPL2Q5T653 305 aaKnown RBP1.77□□□□□ -2.13
VPS41-213ENST00000485955 FKBP1CQ5VVH2 108 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 GLT8D1Q68CQ7 371 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 WDR59Q6PJI9 974 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 CEMP1Q6PRD7 247 aaPredicted RBP1.77□□□□□ -2.13
VPS41-213ENST00000485955 RASL11AQ6T310 242 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 CROCCP2Q86T23 111 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 LRP11Q86VZ4 500 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 C1orf174Q8IYL3 243 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 SLC22A24Q8N4F4 322 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 ZNF555Q8NEP9 628 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 OR51T1Q8NGJ9 327 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 MRPL30Q8TCC3 161 aaKnown RBP1.77□□□□□ -2.13
VPS41-213ENST00000485955 TMEM106AQ96A25 262 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 RBMXL1Q96E39 390 aaKnown RBP1.77□□□□□ -2.13
VPS41-213ENST00000485955 GNPNAT1Q96EK6 184 aaPredicted RBP1.77□□□□□ -2.13
VPS41-213ENST00000485955 ABHD14BQ96IU4 210 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 TP53RKQ96S44 253 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 LXNQ9BS40 222 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 RTL8AQ9BWD3 113 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 GGTLC1Q9BX51 225 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 OR2J1Q9GZK6 312 aa1.77□□□□□ -2.13
VPS41-213ENST00000485955 YIPF3Q9GZM5 350 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms