RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 LAMA3Q16787 3333 aa3.15□□□□□ -1.91
PRPF38B-205ENST00000485810 KIAA1549Q9HCM3 1950 aa3.15□□□□□ -1.91
PRPF38B-205ENST00000485810 TNRC6BQ9UPQ9 1833 aaKnown RBP3.15□□□□□ -1.91
PRPF38B-205ENST00000485810 CDH23Q9H251 3354 aa3.15□□□□□ -1.91
PRPF38B-205ENST00000485810 SAA2-SAA4A0A096LPE2 208 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 H3BQ15 152 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 RBMY1CP0DJD4 496 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 MYCNOSP40205 109 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 HLA-DRB3P79483 266 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 Q0VFX4 171 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 TMEM14EPQ6UXP3 125 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 ZNF818PQ6ZRF7 136 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 ZNF429Q86V71 674 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 LRP11Q86VZ4 500 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 Q8IYB0 196 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 RBMXL3Q8N7X1 1067 aaKnown RBP3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 NUP35Q8NFH5 326 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 OR2T6Q8NHC8 308 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 MRPL30Q8TCC3 161 aaKnown RBP3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 PSMF1Q92530 271 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 STARD4Q96DR4 205 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 PYGO2Q9BRQ0 406 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 GNB1LQ9BYB4 327 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 PRO3102Q9H379 93 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 CCL28Q9NRJ3 127 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 TAAR3PQ9P1P4 343 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 ZNF257Q9Y2Q1 563 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 MED12Q93074 2177 aa3.14□□□□□ -1.91
PRPF38B-205ENST00000485810 TRAV8-6A0A0B4J262 113 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 IGKV1D-13A0A0B4J2D9 117 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 A0A0G2JMM0 328 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 LOC100131303A0A0U1RQF7 123 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 A0A1W2PPB8 328 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 A0A1W2PRS3 328 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 IFITM10A6NMD0 228 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 CD300LBA8K4G0 201 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 KIR3DP1A8MWS1 328 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 SHISA9B4DS77 424 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 TMEM250H0YL14 139 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 UPK2O00526 184 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 SSSCA1O60232 199 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 MRPL33O75394 65 aaKnown RBP3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 CXorf1O96002 111 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 HLA-DRB1P01911 266 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 CD55P08174 381 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 P0C879 139 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 PATE4P0C8F1 98 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 ZNF883P0CG24 379 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 IGKV1-13P0DP09 117 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 BCL2P10415 239 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 CCL4P13236 92 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 RPL29P47914 159 aaKnown RBP3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 TPPP2P59282 170 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 UBE2NP61088 152 aaKnown RBP3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 CCL20P78556 96 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 JOSD1Q15040 202 aaPredicted RBP3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 ZNF146Q15072 292 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 C12orf74Q32Q52 190 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 NSUN5P1Q3KNT7 163 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 Q6P435 159 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 C11orf53Q8IXP5 236 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 ZNF525Q8N782 197 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 CYB561D1Q8N8Q1 229 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 FER1L6-AS1Q8NA97 138 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 DERL1Q9BUN8 251 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 COMMD5Q9GZQ3 224 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 PARP12Q9H0J9 701 aaKnown RBP3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 JPT2Q9H910 190 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 SDF2L1Q9HCN8 221 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 RPRMQ9NS64 109 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 DEPPQ9NTK1 212 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 ZNF256Q9Y2P7 627 aaPredicted RBP3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 PKD1L2Q7Z442 2459 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 DNAH14Q0VDD8 3507 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 PI4KAP42356 2102 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 SDK2Q58EX2 2172 aa3.13□□□□□ -1.91
PRPF38B-205ENST00000485810 LAMA2P24043 3122 aaKnown RBP3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 A0A0G2JRQ6 117 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 PLAC8L1A1L4L8 177 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 PINLYPA6NC86 204 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 E9PLD3 99 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 OVOL1O14753 267 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 NPFFO15130 113 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 SYNGR2O43760 224 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 NDUFS5O43920 106 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 HIST1H2BKO60814 126 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 IGKV1-39P01597 117 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 IGKV1-5P01602 117 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 IGKV1D-39P04432 117 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 HIST1H2BJP06899 126 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 CXCL1P09341 107 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 MDKP21741 143 aaPredicted RBP3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 GNLYP22749 145 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 HIST1H2BOP23527 126 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 HIST1H2BBP33778 126 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 RPS10P46783 165 aaKnown RBP3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 NDUFA6P56556 154 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 HIST1H2BDP58876 126 aa3.12□□□□□ -1.91
PRPF38B-205ENST00000485810 HIST1H2BCP62807 126 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms