RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 C21orf62Q9NYP8 219 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 CTSZQ9UBR2 303 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 ZNF580Q9UK33 172 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 LINC00312Q9Y6C7 94 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 SERP1Q9Y6X1 66 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 BTAF1O14981 1849 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 LTBP4Q8N2S1 1624 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 TTC3P53804 2025 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 IGHV1OR15-1A0A075B7D0 117 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 A0A087WW49 117 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 IGKV1-8A0A0C4DH67 115 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 TRBV27A0A0K0K1C4 114 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 MCRIP1C9JLW8 97 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 TMEM256-PLSCR3K7ERE1 68 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 SYNGR2O43760 224 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 PITX3O75364 302 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 NXPH4O95158 308 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 CFDP00746 253 aaPredicted RBP3.38□□□□□ -1.87
RTN4-213ENST00000485749 RBP4P02753 201 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 MT-ATP8P03928 68 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 CXCL1P09341 107 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 PIPP12273 146 aaPredicted RBP3.38□□□□□ -1.87
RTN4-213ENST00000485749 CRISP2P16562 243 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 LMO2P25791 158 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 S100A3P33764 101 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 RPS10P46783 165 aaKnown RBP3.38□□□□□ -1.87
RTN4-213ENST00000485749 LINC00313P59037 77 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 HERVK_113P61574 105 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 RPL38P63173 70 aaKnown RBP3.38□□□□□ -1.87
RTN4-213ENST00000485749 SEC11AP67812 179 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 Q6ZS92 163 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 SLC25A26Q70HW3 274 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 RPS27LQ71UM5 84 aaKnown RBP3.38□□□□□ -1.87
RTN4-213ENST00000485749 SLC25A42Q86VD7 318 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 C17orf82Q86X59 251 aaPredicted RBP3.38□□□□□ -1.87
RTN4-213ENST00000485749 ZNF101Q8IZC7 436 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 C10orf111Q8N326 155 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 LINC00311Q8N616 119 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 TMEM252Q8N6L7 170 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 NKAPP1Q8N9T2 125 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 TAF15Q92804 592 aaKnown RBP eCLIP3.38□□□□□ -1.87
RTN4-213ENST00000485749 S100A16Q96FQ6 103 aaKnown RBP3.38□□□□□ -1.87
RTN4-213ENST00000485749 PRELID3AQ96N28 172 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 PARLQ9H300 379 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 FAM60AQ9NP50 221 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 DPM3Q9P2X0 92 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 RABAC1Q9UI14 185 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 FER1L6Q2WGJ9 1857 aa3.38□□□□□ -1.87
RTN4-213ENST00000485749 THSD7AQ9UPZ6 1657 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 PLXND1Q9Y4D7 1925 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 IGKV1-27A0A075B6S5 117 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 IGHV7-81A0A0B4J1V7 117 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 LOC285095A0A1B0GVY8 99 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 ZNF860A6NHJ4 632 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 H3BT86 120 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 M0R2P5 195 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 M0R378 163 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 SOCS1O15524 211 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 NDUFB6O95139 128 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 UBL3O95164 117 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 IGLV3-25P01717 112 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 IGLV3-27P01718 113 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 CD3DP04234 171 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 IGHV3-43DP0DP04 118 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 COX7A1P24310 79 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 HINT1P49773 126 aaPredicted RBP3.37□□□□□ -1.87
RTN4-213ENST00000485749 DAPP51397 102 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 YPEL3P61236 119 aaPredicted RBP3.37□□□□□ -1.87
RTN4-213ENST00000485749 NPC2P61916 151 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 LGALS9BQ3B8N2 356 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 ORMDL2Q53FV1 153 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 ZNF329Q86UD4 541 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 TEN1Q86WV5 123 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 APCDD1LQ8NCL9 501 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 OR1J4Q8NGS1 313 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 FAM57AQ8TBR7 257 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 YPEL2Q96QA6 119 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 PARP12Q9H0J9 701 aaKnown RBP3.37□□□□□ -1.87
RTN4-213ENST00000485749 PLEKHF2Q9H8W4 249 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 OR5V1Q9UGF6 321 aa3.37□□□□□ -1.87
RTN4-213ENST00000485749 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 PLA2G10O15496 165 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 HIST1H2BKO60814 126 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 FSTL3O95633 263 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 SLC25A5P05141 298 aaKnown RBP3.36□□□□□ -1.87
RTN4-213ENST00000485749 HIST1H2BJP06899 126 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 CSN1S1P47710 185 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 SNRPD3P62318 126 aaKnown RBP3.36□□□□□ -1.87
RTN4-213ENST00000485749 CXCL6P80162 114 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 MRPS36P82909 103 aaKnown RBP3.36□□□□□ -1.87
RTN4-213ENST00000485749 TDRG1Q3Y452 100 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 PYDC2Q56P42 97 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 HEPN1Q6WQI6 88 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 TMEM91Q6ZNR0 172 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 SCXQ7RTU7 201 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 TMEM61Q8N0U2 210 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 OR10G2Q8NGC3 310 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 OR8A1Q8NGG7 326 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 VSTM2AQ8TAG5 236 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 DCANP1Q8TF63 244 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms