RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 EBLN2Q6P2I7 272 aa9.18□□□□□ -0.94
PTCD1-205ENST00000485746 Q6ZRG5 221 aa9.18□□□□□ -0.94
PTCD1-205ENST00000485746 SHANK2-AS3Q9BTD1 123 aa9.18□□□□□ -0.94
PTCD1-205ENST00000485746 C11orf1Q9H5F2 150 aa9.18□□□□□ -0.94
PTCD1-205ENST00000485746 UBE2L5PA0A1B0GUS4 154 aa9.17□□□□□ -0.94
PTCD1-205ENST00000485746 ISLRO14498 428 aa9.17□□□□□ -0.94
PTCD1-205ENST00000485746 PLP1P60201 277 aa9.17□□□□□ -0.94
PTCD1-205ENST00000485746 OR4B1Q8NGF8 309 aa9.17□□□□□ -0.94
PTCD1-205ENST00000485746 UHRF2Q96PU4 802 aa9.17□□□□□ -0.94
PTCD1-205ENST00000485746 MGST2Q99735 147 aa9.17□□□□□ -0.94
PTCD1-205ENST00000485746 ARV1Q9H2C2 271 aa9.17□□□□□ -0.94
PTCD1-205ENST00000485746 RPRMQ9NS64 109 aa9.17□□□□□ -0.94
PTCD1-205ENST00000485746 CXorf65A6NEN9 183 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 H3BMM0 161 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 PET100P0DJ07 73 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 FGF7P21781 194 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 PMS2P11Q13670 270 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 C10orf113Q5VZT2 155 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 MIC13Q5XKP0 118 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 FOXI2Q6ZQN5 318 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 LINC00305Q7Z4B0 112 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 OR1L4Q8NGR5 311 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 C1QTNF4Q9BXJ3 329 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 CLEC5AQ9NY25 188 aa9.16□□□□□ -0.94
PTCD1-205ENST00000485746 ELOA3CA0A087WX78 387 aaPredicted RBP9.15□□□□□ -0.94
PTCD1-205ENST00000485746 HLA-DRB4P13762 266 aa9.15□□□□□ -0.94
PTCD1-205ENST00000485746 SPATA31B1PQ5VZV4 182 aa9.15□□□□□ -0.94
PTCD1-205ENST00000485746 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.15□□□□□ -0.94
PTCD1-205ENST00000485746 PATE2Q6UY27 113 aa9.15□□□□□ -0.94
PTCD1-205ENST00000485746 PPP1R1CQ8WVI7 109 aa9.15□□□□□ -0.94
PTCD1-205ENST00000485746 SAV1Q9H4B6 383 aaPredicted RBP9.15□□□□□ -0.94
PTCD1-205ENST00000485746 DNAJC4Q9NNZ3 241 aa9.15□□□□□ -0.94
PTCD1-205ENST00000485746 OR5AC2Q9NZP5 309 aa9.15□□□□□ -0.94
PTCD1-205ENST00000485746 WDR83OSQ9Y284 106 aa9.15□□□□□ -0.94
PTCD1-205ENST00000485746 HLA-DRB4X5D2U9 266 aa9.15□□□□□ -0.94
PTCD1-205ENST00000485746 SOCS3O14543 225 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 PTTG1O95997 202 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 C4BPBP20851 252 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 FXYD7P58549 80 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 DEFB1P60022 68 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 EWSR1Q01844 656 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTCD1-205ENST00000485746 NHLH2Q02577 135 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 IGFL4Q6B9Z1 124 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 BPIFA4PQ86YQ2 179 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 ZNF709Q8N972 641 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 ZNF738Q8NE65 137 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 OR5C1Q8NGR4 320 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 PFDN5Q99471 154 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 XCL2Q9UBD3 114 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 ALG5Q9Y673 324 aa9.14□□□□□ -0.95
PTCD1-205ENST00000485746 F6UB75 175 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 DEFB4AO15263 64 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 RPL29P47914 159 aaKnown RBP9.13□□□□□ -0.95
PTCD1-205ENST00000485746 H2BFSP57053 126 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 B2MP61769 119 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 PSG9Q00887 426 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 CLINT1Q14677 625 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 VWC2Q2TAL6 325 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 GDF5OSQ5U4N7 250 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 C20orf173Q96LM9 149 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 MED28Q9H204 178 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 SLC39A9Q9NUM3 307 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 PPP1R14DQ9NXH3 145 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 PXMP4Q9Y6I8 212 aa9.13□□□□□ -0.95
PTCD1-205ENST00000485746 IGHV3OR16-12A0A075B7B8 117 aa9.12□□□□□ -0.95
PTCD1-205ENST00000485746 H0YIZ8 118 aa9.12□□□□□ -0.95
PTCD1-205ENST00000485746 MPDU1O75352 247 aa9.12□□□□□ -0.95
PTCD1-205ENST00000485746 DUSP14O95147 198 aaKnown RBP9.12□□□□□ -0.95
PTCD1-205ENST00000485746 MPC2O95563 127 aa9.12□□□□□ -0.95
PTCD1-205ENST00000485746 SNRPCP09234 159 aaKnown RBP9.12□□□□□ -0.95
PTCD1-205ENST00000485746 GIG44P09565 113 aaPredicted RBP9.12□□□□□ -0.95
PTCD1-205ENST00000485746 OPCMLQ14982 345 aa9.12□□□□□ -0.95
PTCD1-205ENST00000485746 FAM78BQ5VT40 261 aa9.12□□□□□ -0.95
PTCD1-205ENST00000485746 RNF182Q8N6D2 247 aa9.12□□□□□ -0.95
PTCD1-205ENST00000485746 THAP6Q8TBB0 222 aa9.12□□□□□ -0.95
PTCD1-205ENST00000485746 TMEM37Q8WXS4 190 aa9.12□□□□□ -0.95
PTCD1-205ENST00000485746 NBEAL2Q6ZNJ1 2754 aa9.11□□□□□ -0.95
PTCD1-205ENST00000485746 A0A087X0K7 114 aa9.11□□□□□ -0.95
PTCD1-205ENST00000485746 A0A0J9YX75 114 aa9.11□□□□□ -0.95
PTCD1-205ENST00000485746 IFNA5P01569 189 aa9.11□□□□□ -0.95
PTCD1-205ENST00000485746 MIFP14174 115 aa9.11□□□□□ -0.95
PTCD1-205ENST00000485746 C11orf45Q8TAV5 145 aa9.11□□□□□ -0.95
PTCD1-205ENST00000485746 SCGB1C1Q8TD33 95 aa9.11□□□□□ -0.95
PTCD1-205ENST00000485746 MFFQ9GZY8 342 aa9.11□□□□□ -0.95
PTCD1-205ENST00000485746 C11orf68Q9H3H3 251 aaKnown RBP9.11□□□□□ -0.95
PTCD1-205ENST00000485746 TRAV8-2A0A0B4J237 113 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 IGHV4-28A0A0C4DH34 117 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 NUPR2A6NF83 97 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 C17orf112F2Z3M2 114 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 H3BTX0 84 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 JTBO76095 146 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 RPL12P30050 165 aaKnown RBP9.1□□□□□ -0.95
PTCD1-205ENST00000485746 RHOBP62745 196 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 PRR20EP86478 221 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 PRR20CP86479 221 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 PRR20DP86480 221 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 PRR20BP86481 221 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 PRR20AP86496 221 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 PSG3Q16557 428 aa9.1□□□□□ -0.95
PTCD1-205ENST00000485746 LCN15Q6UWW0 184 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms