RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	SLC25A21	Q9BQT8	299 aa	Predicted RBP	7.55	□□□□□ -1.2
HMGN1-215	ENST00000485550	C7orf50	Q9BRJ6	194 aa	Known RBP	7.55	□□□□□ -1.2
HMGN1-215	ENST00000485550	NDUFAF3	Q9BU61	184 aa		7.55	□□□□□ -1.2
HMGN1-215	ENST00000485550	KRTAP9-9	Q9BYP9	154 aa		7.55	□□□□□ -1.2
HMGN1-215	ENST00000485550	KRTAP9-4	Q9BYQ2	154 aa		7.55	□□□□□ -1.2
HMGN1-215	ENST00000485550	SLC25A32	Q9H2D1	315 aa		7.55	□□□□□ -1.2
HMGN1-215	ENST00000485550	TMED3	Q9Y3Q3	217 aa		7.55	□□□□□ -1.2
HMGN1-215	ENST00000485550	RFNG	Q9Y644	331 aa		7.55	□□□□□ -1.2
HMGN1-215	ENST00000485550	PIGBOS1	A0A0B4J2F0	54 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550		A0A0J9YX75	114 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	LINC00854	A0A1B0GVQ3	168 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	SMCO3	A2RU48	225 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	PRSS46	E5RG02	174 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	ISLR	O14498	428 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	ADAP1	O75689	374 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	AMBP	P02760	352 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	HTN3	P15516	51 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	GALR1	P47211	349 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	POLR2G	P62487	172 aa	Known RBP eCLIP	7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	AKR1C1	Q04828	323 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	FGL1	Q08830	312 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	FAM222A	Q5U5X8	452 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	C1orf158	Q8N1D5	194 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	POM121L12	Q8N7R1	296 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	OR1B1	Q8NGR6	318 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	C17orf77	Q96MU5	243 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	CIB3	Q96Q77	187 aa	Predicted RBP	7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	RPRM	Q9NS64	109 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	DOK5	Q9P104	306 aa		7.54	□□□□□ -1.2
HMGN1-215	ENST00000485550	TMEM189	A5PLL7	270 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	SMIM9	A6NGZ8	99 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	PRM2	P04554	102 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550		P0DMU3	169 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	FAM231A	P0DMU4	169 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	FAM231C	P0DMU5	169 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	PRB4	P10163	310 aa	Predicted RBP	7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	ACOT7L	Q6ZUV0	252 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	CCDC190	Q86UF4	302 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	BPIFC	Q8NFQ6	507 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	TMEM147	Q9BVK8	224 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	DKK2	Q9UBU2	259 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	FLVCR2	Q9UPI3	526 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	GOLT1B	Q9Y3E0	138 aa		7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	STRAP	Q9Y3F4	350 aa	Known RBP	7.53	□□□□□ -1.2
HMGN1-215	ENST00000485550	IGLV2-18	A0A075B6J9	118 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	LOC102723971	A0A1B0GUV8	181 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	C9orf170	A2RU37	121 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	CCNK	O75909	580 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	CFD	P00746	253 aa	Predicted RBP	7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	HBE1	P02100	147 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	PAX9	P55771	341 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	ID3	Q02535	119 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	BAK1	Q16611	211 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	SPATA31B1P	Q5VZV4	182 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	RNF182	Q8N6D2	247 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	CLUHP3	Q96NS8	147 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	NIPSNAP3B	Q9BS92	247 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	TMEM208	Q9BTX3	173 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	PSENEN	Q9NZ42	101 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	YTHDF2	Q9Y5A9	579 aa	Known RBP	7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	HERC1	Q15751	4861 aa		7.52	□□□□□ -1.21
HMGN1-215	ENST00000485550	TRAV8-2	A0A0B4J237	113 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550		M0R2Z0	102 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	IFNA21	P01568	189 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	IL5	P05113	134 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	INPP1	P49441	399 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	MEOX2	P50222	304 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	CNN1	P51911	297 aa	Known RBP	7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	RRAS2	P62070	204 aa	Predicted RBP	7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	RRN3P1	Q2M238	152 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	LGALS9B	Q3B8N2	356 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	CYP2G1P	Q6ZSU1	146 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	UBE2DNL	Q8IWF7	75 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	SRR	Q9GZT4	340 aa		7.51	□□□□□ -1.21
HMGN1-215	ENST00000485550	ZNF705G	A8MUZ8	300 aa	Predicted RBP	7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	C16orf90	A8MZG2	172 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	SSSCA1	O60232	199 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	NDUFB6	O95139	128 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	SCGB1D2	O95969	90 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	OR5G3	P0C626	314 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	OR4E1	P0C645	316 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	ANXA7	P20073	488 aa	Known RBP	7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	RAP2B	P61225	183 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	SPINK13	Q1W4C9	94 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	SPANXN2	Q5MJ10	180 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	SAMD13	Q5VXD3	122 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	TRIQK	Q629K1	86 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	AMTN	Q6UX39	209 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	TMEM144	Q7Z5S9	345 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	OR11H7	Q8NGC8	314 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	OR4D5	Q8NGN0	318 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	DEDD2	Q8WXF8	326 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	IGF2BP2-AS1	Q96M15	143 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	UHRF2	Q96PU4	802 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	SLC45A2	Q9UMX9	530 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	HIGD1A	Q9Y241	93 aa		7.5	□□□□□ -1.21
HMGN1-215	ENST00000485550	DMBT1	Q9UGM3	2413 aa	Predicted RBP	7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	LRP1B	Q9NZR2	4599 aa		7.49	□□□□□ -1.21

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