RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 Q6ZRG5 221 aa8.84□□□□□ -0.99
APTX-227ENST00000485479 C17orf77Q96MU5 243 aa8.84□□□□□ -0.99
APTX-227ENST00000485479 SHANK2-AS3Q9BTD1 123 aa8.84□□□□□ -0.99
APTX-227ENST00000485479 SH3BGRL3Q9H299 93 aa8.84□□□□□ -0.99
APTX-227ENST00000485479 SRD5A3Q9H8P0 318 aa8.84□□□□□ -0.99
APTX-227ENST00000485479 OR4C46A6NHA9 309 aa8.83□□□□□ -1
APTX-227ENST00000485479 IFNA5P01569 189 aa8.83□□□□□ -1
APTX-227ENST00000485479 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
APTX-227ENST00000485479 RPL7L1Q6DKI1 246 aaKnown RBP8.83□□□□□ -1
APTX-227ENST00000485479 MFFQ9GZY8 342 aa8.83□□□□□ -1
APTX-227ENST00000485479 TUBA4BQ9H853 241 aa8.83□□□□□ -1
APTX-227ENST00000485479 MAP6D1Q9H9H5 199 aa8.83□□□□□ -1
APTX-227ENST00000485479 K7EQG2 157 aa8.82□□□□□ -1
APTX-227ENST00000485479 CFDP00746 253 aaPredicted RBP8.82□□□□□ -1
APTX-227ENST00000485479 DEFB131AP59861 70 aa8.82□□□□□ -1
APTX-227ENST00000485479 SCGB1C1Q8TD33 95 aa8.82□□□□□ -1
APTX-227ENST00000485479 SEPSECSQ9HD40 501 aaKnown RBP8.82□□□□□ -1
APTX-227ENST00000485479 NRN1Q9NPD7 142 aa8.82□□□□□ -1
APTX-227ENST00000485479 HELTA6NFD8 242 aa8.82□□□□□ -1
APTX-227ENST00000485479 MPDU1O75352 247 aa8.82□□□□□ -1
APTX-227ENST00000485479 CXCL2P19875 107 aa8.82□□□□□ -1
APTX-227ENST00000485479 PAFAH1B2P68402 229 aa8.82□□□□□ -1
APTX-227ENST00000485479 PSMG4Q5JS54 123 aa8.82□□□□□ -1
APTX-227ENST00000485479 FFAR4Q5NUL3 377 aa8.82□□□□□ -1
APTX-227ENST00000485479 SBSPONQ8IVN8 264 aa8.82□□□□□ -1
APTX-227ENST00000485479 ZNF709Q8N972 641 aa8.82□□□□□ -1
APTX-227ENST00000485479 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
APTX-227ENST00000485479 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
APTX-227ENST00000485479 NBEAL2Q6ZNJ1 2754 aa8.81□□□□□ -1
APTX-227ENST00000485479 RBMY1BA6NDE4 496 aaKnown RBP8.81□□□□□ -1
APTX-227ENST00000485479 RBMY1EA6NEQ0 496 aaKnown RBP8.81□□□□□ -1
APTX-227ENST00000485479 RBMY1DP0C7P1 496 aaKnown RBP8.81□□□□□ -1
APTX-227ENST00000485479 RPL35AP18077 110 aaKnown RBP8.81□□□□□ -1
APTX-227ENST00000485479 HLA-DMBP28068 263 aa8.81□□□□□ -1
APTX-227ENST00000485479 FAM78BQ5VT40 261 aa8.81□□□□□ -1
APTX-227ENST00000485479 MIR17HGQ75NE6 70 aa8.81□□□□□ -1
APTX-227ENST00000485479 RNF182Q8N6D2 247 aa8.81□□□□□ -1
APTX-227ENST00000485479 KNCNA6PVL3 124 aa8.81□□□□□ -1
APTX-227ENST00000485479 PYYP10082 97 aa8.81□□□□□ -1
APTX-227ENST00000485479 ATP6V0CP27449 155 aa8.81□□□□□ -1
APTX-227ENST00000485479 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.81□□□□□ -1
APTX-227ENST00000485479 AKAP14Q86UN6 197 aa8.81□□□□□ -1
APTX-227ENST00000485479 LINC00052Q96N35 136 aa8.81□□□□□ -1
APTX-227ENST00000485479 C17orf112F2Z3M2 114 aa8.8□□□□□ -1
APTX-227ENST00000485479 SLC17A3O00476 420 aa8.8□□□□□ -1
APTX-227ENST00000485479 HMGB3O15347 200 aaKnown RBP8.8□□□□□ -1
APTX-227ENST00000485479 GALR1P47211 349 aa8.8□□□□□ -1
APTX-227ENST00000485479 RAB2AP61019 212 aa8.8□□□□□ -1
APTX-227ENST00000485479 C1orf194Q5T5A4 169 aa8.8□□□□□ -1
APTX-227ENST00000485479 C20orf173Q96LM9 149 aa8.8□□□□□ -1
APTX-227ENST00000485479 RETNQ9HD89 108 aa8.8□□□□□ -1
APTX-227ENST00000485479 PFDN2Q9UHV9 154 aa8.8□□□□□ -1
APTX-227ENST00000485479 ELOA3CA0A087WX78 387 aaPredicted RBP8.79□□□□□ -1
APTX-227ENST00000485479 F6UB75 175 aa8.79□□□□□ -1
APTX-227ENST00000485479 SOCS3O14543 225 aa8.79□□□□□ -1
APTX-227ENST00000485479 MRPS12O15235 138 aaKnown RBP8.79□□□□□ -1
APTX-227ENST00000485479 ZNF266Q14584 549 aa8.79□□□□□ -1
APTX-227ENST00000485479 GDF5OSQ5U4N7 250 aa8.79□□□□□ -1
APTX-227ENST00000485479 OR1L4Q8NGR5 311 aa8.79□□□□□ -1
APTX-227ENST00000485479 H3BQ15 152 aa8.79□□□□□ -1
APTX-227ENST00000485479 CD5P06127 495 aa8.79□□□□□ -1
APTX-227ENST00000485479 OR10J4P0C629 311 aa8.79□□□□□ -1
APTX-227ENST00000485479 ATF4P18848 351 aaPredicted RBP8.79□□□□□ -1
APTX-227ENST00000485479 ACTL10Q5JWF8 245 aa8.79□□□□□ -1
APTX-227ENST00000485479 C16orf92Q96LL3 132 aa8.79□□□□□ -1
APTX-227ENST00000485479 PFDN5Q99471 154 aa8.79□□□□□ -1
APTX-227ENST00000485479 SLC25A2Q9BXI2 301 aa8.79□□□□□ -1
APTX-227ENST00000485479 CYTL1Q9NRR1 136 aa8.79□□□□□ -1
APTX-227ENST00000485479 HUWE1Q7Z6Z7 4374 aaKnown RBP8.78□□□□□ -1
APTX-227ENST00000485479 IGKV3-20P01619 116 aa8.78□□□□□ -1
APTX-227ENST00000485479 ZNF705DP0CH99 300 aaPredicted RBP8.78□□□□□ -1
APTX-227ENST00000485479 ZNF705BP0CI00 300 aaPredicted RBP8.78□□□□□ -1
APTX-227ENST00000485479 RPL7P18124 248 aaKnown RBP8.78□□□□□ -1
APTX-227ENST00000485479 NKX2-5P52952 324 aaPredicted RBP8.78□□□□□ -1
APTX-227ENST00000485479 PXDC1Q5TGL8 231 aa8.78□□□□□ -1
APTX-227ENST00000485479 TCTE3Q8IZS6 198 aa8.78□□□□□ -1
APTX-227ENST00000485479 GATAD1Q8WUU5 269 aa8.78□□□□□ -1
APTX-227ENST00000485479 TENM3Q9P273 2699 aa8.78□□□□□ -1
APTX-227ENST00000485479 TRAV8-2A0A0B4J237 113 aa8.77□□□□□ -1
APTX-227ENST00000485479 HAGHQ16775 308 aa8.77□□□□□ -1
APTX-227ENST00000485479 FAM122CQ6P4D5 195 aa8.77□□□□□ -1
APTX-227ENST00000485479 KCNRGQ8N5I3 272 aa8.77□□□□□ -1
APTX-227ENST00000485479 BLNKQ8WV28 456 aa8.77□□□□□ -1
APTX-227ENST00000485479 B9D2Q9BPU9 175 aa8.77□□□□□ -1
APTX-227ENST00000485479 FAM110AQ9BQ89 295 aa8.77□□□□□ -1
APTX-227ENST00000485479 SNRPD3P62318 126 aaKnown RBP8.77□□□□□ -1.01
APTX-227ENST00000485479 BPIFA4PQ86YQ2 179 aa8.77□□□□□ -1.01
APTX-227ENST00000485479 FAM167A-AS1Q96KT0 104 aa8.77□□□□□ -1.01
APTX-227ENST00000485479 PARD6GQ9BYG4 376 aaPredicted RBP8.77□□□□□ -1.01
APTX-227ENST00000485479 ZNF586Q9NXT0 402 aa8.77□□□□□ -1.01
APTX-227ENST00000485479 HMSDA8MTL9 139 aa8.76□□□□□ -1.01
APTX-227ENST00000485479 OR7C2O60412 319 aa8.76□□□□□ -1.01
APTX-227ENST00000485479 IGLC2P0DOY2 106 aa8.76□□□□□ -1.01
APTX-227ENST00000485479 ZNF345Q14585 488 aa8.76□□□□□ -1.01
APTX-227ENST00000485479 LGALSLQ3ZCW2 172 aaPredicted RBP8.76□□□□□ -1.01
APTX-227ENST00000485479 SSX7Q7RTT5 188 aa8.76□□□□□ -1.01
APTX-227ENST00000485479 ARPC5LQ9BPX5 153 aa8.76□□□□□ -1.01
APTX-227ENST00000485479 ZNF471Q9BX82 626 aaPredicted RBP8.76□□□□□ -1.01
APTX-227ENST00000485479 KCNIP2Q9NS61 270 aa8.76□□□□□ -1.01
APTX-227ENST00000485479 FUT9Q9Y231 359 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms