RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 IGLL1P15814 213 aa13.28□□□□□ -0.28
CHMP3-207ENST00000485465 INSL3P51460 131 aa13.28□□□□□ -0.28
CHMP3-207ENST00000485465 OR8I2Q8N0Y5 310 aa13.28□□□□□ -0.28
CHMP3-207ENST00000485465 IGLV1-51P01701 117 aa13.27□□□□□ -0.29
CHMP3-207ENST00000485465 CDC34P49427 236 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-207ENST00000485465 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.29
CHMP3-207ENST00000485465 ALKAL2Q6UX46 152 aa13.27□□□□□ -0.29
CHMP3-207ENST00000485465 TCF24Q7RTU0 167 aa13.27□□□□□ -0.29
CHMP3-207ENST00000485465 ACTR3CQ9C0K3 210 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-207ENST00000485465 CMYA5Q8N3K9 4069 aa13.26□□□□□ -0.29
CHMP3-207ENST00000485465 CD5P06127 495 aa13.26□□□□□ -0.29
CHMP3-207ENST00000485465 RPL7P18124 248 aaKnown RBP13.26□□□□□ -0.29
CHMP3-207ENST00000485465 SULT1A2P50226 295 aa13.26□□□□□ -0.29
CHMP3-207ENST00000485465 RAB5CP51148 216 aa13.26□□□□□ -0.29
CHMP3-207ENST00000485465 CD300EQ496F6 205 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-207ENST00000485465 DPPA3Q6W0C5 159 aa13.26□□□□□ -0.29
CHMP3-207ENST00000485465 SIGLEC15Q6ZMC9 328 aa13.26□□□□□ -0.29
CHMP3-207ENST00000485465 RAB24Q969Q5 203 aa13.26□□□□□ -0.29
CHMP3-207ENST00000485465 FAM167A-AS1Q96KT0 104 aa13.26□□□□□ -0.29
CHMP3-207ENST00000485465 GPR82Q96P67 336 aa13.26□□□□□ -0.29
CHMP3-207ENST00000485465 SLC25A2Q9BXI2 301 aa13.26□□□□□ -0.29
CHMP3-207ENST00000485465 HELTA6NFD8 242 aa13.25□□□□□ -0.29
CHMP3-207ENST00000485465 EIF3GO75821 320 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHMP3-207ENST00000485465 FHITP49789 147 aa13.25□□□□□ -0.29
CHMP3-207ENST00000485465 TAS2R45P59539 299 aa13.25□□□□□ -0.29
CHMP3-207ENST00000485465 ZNF726P1Q15940 193 aa13.25□□□□□ -0.29
CHMP3-207ENST00000485465 FAM74A1Q5RGS3 127 aa13.25□□□□□ -0.29
CHMP3-207ENST00000485465 BPIFA4PQ86YQ2 179 aa13.25□□□□□ -0.29
CHMP3-207ENST00000485465 OR2K2Q8NGT1 345 aa13.25□□□□□ -0.29
CHMP3-207ENST00000485465 FAM213BQ8TBF2 198 aa13.25□□□□□ -0.29
CHMP3-207ENST00000485465 GPR61Q9BZJ8 451 aa13.25□□□□□ -0.29
CHMP3-207ENST00000485465 SMAD5-AS1Q9Y6J3 95 aa13.25□□□□□ -0.29
CHMP3-207ENST00000485465 CTXND1A0A1B0GTU2 59 aa13.24□□□□□ -0.29
CHMP3-207ENST00000485465 MRPS12O15235 138 aaKnown RBP13.24□□□□□ -0.29
CHMP3-207ENST00000485465 GALR1P47211 349 aa13.24□□□□□ -0.29
CHMP3-207ENST00000485465 RPL11P62913 178 aaKnown RBP13.24□□□□□ -0.29
CHMP3-207ENST00000485465 KHDC3LQ587J8 217 aa13.24□□□□□ -0.29
CHMP3-207ENST00000485465 TEX261Q6UWH6 196 aa13.24□□□□□ -0.29
CHMP3-207ENST00000485465 RBPMS2Q6ZRY4 209 aaKnown RBP13.24□□□□□ -0.29
CHMP3-207ENST00000485465 SSX7Q7RTT5 188 aa13.24□□□□□ -0.29
CHMP3-207ENST00000485465 TMEM61Q8N0U2 210 aa13.24□□□□□ -0.29
CHMP3-207ENST00000485465 TMEM14CQ9P0S9 112 aa13.24□□□□□ -0.29
CHMP3-207ENST00000485465 TRAV25A0A0B4J276 109 aa13.23□□□□□ -0.29
CHMP3-207ENST00000485465 IZUMO1RA6ND01 250 aa13.23□□□□□ -0.29
CHMP3-207ENST00000485465 HMGB3O15347 200 aaKnown RBP13.23□□□□□ -0.29
CHMP3-207ENST00000485465 WIPF1O43516 503 aa13.23□□□□□ -0.29
CHMP3-207ENST00000485465 STAG3L2P0CL84 134 aa13.23□□□□□ -0.29
CHMP3-207ENST00000485465 STAG3L3P0CL85 134 aa13.23□□□□□ -0.29
CHMP3-207ENST00000485465 GP9P14770 177 aa13.23□□□□□ -0.29
CHMP3-207ENST00000485465 STXBP6Q8NFX7 210 aa13.23□□□□□ -0.29
CHMP3-207ENST00000485465 OR51M1Q9H341 326 aa13.23□□□□□ -0.29
CHMP3-207ENST00000485465 IGKV3-7A0A075B6H7 116 aa13.22□□□□□ -0.29
CHMP3-207ENST00000485465 ZNF785A8K8V0 405 aa13.22□□□□□ -0.29
CHMP3-207ENST00000485465 TSPAN4O14817 238 aa13.22□□□□□ -0.29
CHMP3-207ENST00000485465 OR7C2O60412 319 aa13.22□□□□□ -0.29
CHMP3-207ENST00000485465 PYYP10082 97 aa13.22□□□□□ -0.29
CHMP3-207ENST00000485465 ATF4P18848 351 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-207ENST00000485465 OXLD1Q5BKU9 147 aa13.22□□□□□ -0.29
CHMP3-207ENST00000485465 ZNF680Q8NEM1 530 aa13.22□□□□□ -0.29
CHMP3-207ENST00000485465 RNF141Q8WVD5 230 aa13.22□□□□□ -0.29
CHMP3-207ENST00000485465 ZNF503Q96F45 646 aa13.22□□□□□ -0.29
CHMP3-207ENST00000485465 PAXXQ9BUH6 204 aa13.22□□□□□ -0.29
CHMP3-207ENST00000485465 IGLC2P0DOY2 106 aa13.21□□□□□ -0.29
CHMP3-207ENST00000485465 LCN12Q6JVE5 192 aa13.21□□□□□ -0.29
CHMP3-207ENST00000485465 LCN15Q6UWW0 184 aa13.21□□□□□ -0.29
CHMP3-207ENST00000485465 PQLC2Q6ZP29 291 aa13.21□□□□□ -0.29
CHMP3-207ENST00000485465 GBGT1Q8N5D6 347 aa13.21□□□□□ -0.29
CHMP3-207ENST00000485465 MBD3L1Q8WWY6 194 aa13.21□□□□□ -0.29
CHMP3-207ENST00000485465 C17orf77Q96MU5 243 aa13.21□□□□□ -0.29
CHMP3-207ENST00000485465 MS4A6AQ9H2W1 248 aa13.21□□□□□ -0.29
CHMP3-207ENST00000485465 DNHD1Q96M86 4753 aa13.21□□□□□ -0.3
CHMP3-207ENST00000485465 A0A087X0K7 114 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 MAP1LC3B2A6NCE7 125 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 ZNF705EA8MWA4 302 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-207ENST00000485465 H3BQ15 152 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 CXorf1O96002 111 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 IFNA7P01567 189 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 H2AFB1P0C5Y9 115 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 ARL14EPLP0DKL9 152 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 HIST1H1EP10412 219 aaKnown RBP13.2□□□□□ -0.3
CHMP3-207ENST00000485465 PAFAH1B2P68402 229 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 FXYD5Q96DB9 178 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 MAP1LC3BQ9GZQ8 125 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 HRH4Q9H3N8 390 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 NRN1Q9NPD7 142 aa13.2□□□□□ -0.3
CHMP3-207ENST00000485465 DNASE2O00115 360 aaPredicted RBP13.19□□□□□ -0.3
CHMP3-207ENST00000485465 SNRPCP09234 159 aaKnown RBP13.19□□□□□ -0.3
CHMP3-207ENST00000485465 OR10J4P0C629 311 aa13.19□□□□□ -0.3
CHMP3-207ENST00000485465 GUCA2BQ16661 112 aa13.19□□□□□ -0.3
CHMP3-207ENST00000485465 WFDC3Q8IUB2 231 aa13.19□□□□□ -0.3
CHMP3-207ENST00000485465 SFT2D1Q8WV19 159 aa13.19□□□□□ -0.3
CHMP3-207ENST00000485465 SPAG8Q99932 426 aaPredicted RBP13.19□□□□□ -0.3
CHMP3-207ENST00000485465 ZNF586Q9NXT0 402 aa13.19□□□□□ -0.3
CHMP3-207ENST00000485465 TRAV2A0A0B4J234 112 aa13.18□□□□□ -0.3
CHMP3-207ENST00000485465 NBEAP1P0C6P0 100 aa13.18□□□□□ -0.3
CHMP3-207ENST00000485465 GCHFRP30047 84 aa13.18□□□□□ -0.3
CHMP3-207ENST00000485465 TFPI2P48307 235 aa13.18□□□□□ -0.3
CHMP3-207ENST00000485465 MEOX2P50222 304 aa13.18□□□□□ -0.3
CHMP3-207ENST00000485465 FGF8P55075 233 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms