RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 YPEL2Q96QA6 119 aa-0.49□□□□□ -2.49
SFPQ-209ENST00000485454 CCL19Q99731 98 aa-0.49□□□□□ -2.49
SFPQ-209ENST00000485454 PROK2Q9HC23 129 aa-0.49□□□□□ -2.49
SFPQ-209ENST00000485454 OR52A1Q9UKL2 312 aa-0.49□□□□□ -2.49
SFPQ-209ENST00000485454 FLNAP21333 2647 aaKnown RBP-0.49□□□□□ -2.49
SFPQ-209ENST00000485454 CELSR2Q9HCU4 2923 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 OR7C1O76099 320 aaPredicted RBP-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 TNNC2P02585 160 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 CD14P08571 375 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 ROMO1P60602 79 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 VBP1P61758 197 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 EIF5AP63241 154 aaKnown RBP-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 CDK6Q00534 326 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 KRTAP20-1Q3LI63 56 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 C8orf74Q6P047 294 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 LINC00299Q6ZSB3 139 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 MRPL27Q9P0M9 148 aaKnown RBP-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 OPTCQ9UBM4 332 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 RFX7Q2KHR2 1363 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 ERBINQ96RT1 1412 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 ARHGEF11O15085 1522 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 PTPN13Q12923 2485 aa-0.5□□□□□ -2.49
SFPQ-209ENST00000485454 COL6A5A8TX70 2615 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 RYR1P21817 5038 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 TRAV26-2A0A0B4J265 109 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 OR4C46A6NHA9 309 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 A6NN06 94 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 C1orf196B1AJZ1 125 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 CYB5BO43169 146 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 TNXBP22105 4242 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 PPIBP23284 216 aaKnown RBP-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 PTPRDP23468 1912 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 SRP14P37108 136 aaKnown RBP-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 CAV3P56539 151 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 RPL37P61927 97 aaKnown RBP-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 MYL5Q02045 173 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 OR2F1Q13607 317 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 KRTAP20-2Q3LI61 65 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 OCIAD2Q56VL3 154 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 VMO1Q7Z5L0 202 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 C10orf111Q8N326 155 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 OR10K1Q8NGX5 313 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 FAM213BQ8TBF2 198 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 KIFC1Q9BW19 673 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 FBXO5Q9UKT4 447 aa-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 NOSIPQ9Y314 301 aaKnown RBP-0.51□□□□□ -2.49
SFPQ-209ENST00000485454 EPG5Q9HCE0 2579 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 TRAV27A0A087WT01 109 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 LOC107984156A0A0G2JMH3 177 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 PRORSD1PA6NEY8 169 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 FAM25EA8MYX2 175 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 HAND1O96004 215 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 SERPINE1P05121 402 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 CALB1P05937 261 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 OR10J4P0C629 311 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 RNASE4P34096 147 aaKnown RBP-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 EIF3IQ13347 325 aaKnown RBP-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 ACOT6Q3I5F7 207 aaPredicted RBP-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 ASB16-AS1Q495Z4 193 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 LYRM7Q5U5X0 104 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 C22orf39Q6P5X5 142 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 ARL17AQ8IVW1 177 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 Q8TAT8 98 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 PTH2Q96A98 100 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 DCUN1D1Q96GG9 259 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 SLC25A21Q9BQT8 299 aaPredicted RBP-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 TMEM133Q9H2Q1 129 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 TVP23BQ9NYZ1 205 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 ABCA13Q86UQ4 5058 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 JMJD1CQ15652 2540 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 NBEAL2Q6ZNJ1 2754 aa-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 RBBP6Q7Z6E9 1792 aaKnown RBP-0.52□□□□□ -2.49
SFPQ-209ENST00000485454 EPPK1P58107 5090 aaKnown RBP-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 DSPP15924 2871 aaKnown RBP-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 ROBO3Q96MS0 1386 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 TGOLN2O43493 480 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 NDUFB3O43676 98 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 IGHV3-33P01772 117 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 TTRP02766 147 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 SULT1A1P50225 295 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 KRR1Q13601 381 aaKnown RBP-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 Q6Q795 121 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 ARPINQ7Z6K5 226 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 PDZD9Q8IXQ8 264 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 CT55Q8WUE5 264 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 PLEKHB2Q96CS7 222 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 CMSS1Q9BQ75 279 aaKnown RBP-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 MRPS26Q9BYN8 205 aaKnown RBP-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 TMEM126AQ9H061 195 aa-0.53□□□□□ -2.49
SFPQ-209ENST00000485454 RTL1A6NKG5 1358 aa-0.54□□□□□ -2.5
SFPQ-209ENST00000485454 MAP3K5Q99683 1374 aa-0.54□□□□□ -2.5
SFPQ-209ENST00000485454 USP9YO00507 2555 aaPredicted RBP-0.54□□□□□ -2.5
SFPQ-209ENST00000485454 FAM159BA6NKW6 160 aa-0.54□□□□□ -2.5
SFPQ-209ENST00000485454 M0R233 179 aa-0.54□□□□□ -2.5
SFPQ-209ENST00000485454 HIST1H1EP10412 219 aaKnown RBP-0.54□□□□□ -2.5
SFPQ-209ENST00000485454 RPL37AP61513 92 aaKnown RBP-0.54□□□□□ -2.5
SFPQ-209ENST00000485454 RANP62826 216 aaKnown RBP-0.54□□□□□ -2.5
SFPQ-209ENST00000485454 IAH1Q2TAA2 248 aaPredicted RBP-0.54□□□□□ -2.5
SFPQ-209ENST00000485454 CASC2Q6XLA1 102 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms