RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 RNF126Q9BV68 326 aa11.41□□□□□ -0.58
SIK3-211ENST00000485363 SLC25A39Q9BZJ4 359 aaPredicted RBP11.41□□□□□ -0.58
SIK3-211ENST00000485363 NPVFQ9HCQ7 196 aa11.41□□□□□ -0.58
SIK3-211ENST00000485363 NDUFA13Q9P0J0 144 aa11.41□□□□□ -0.58
SIK3-211ENST00000485363 GSKIPQ9P0R6 139 aa11.41□□□□□ -0.58
SIK3-211ENST00000485363 DOK5Q9P104 306 aa11.41□□□□□ -0.58
SIK3-211ENST00000485363 HIGD1AQ9Y241 93 aa11.41□□□□□ -0.58
SIK3-211ENST00000485363 GOLT1BQ9Y3E0 138 aa11.41□□□□□ -0.58
SIK3-211ENST00000485363 RFNGQ9Y644 331 aa11.41□□□□□ -0.58
SIK3-211ENST00000485363 DNAH10Q8IVF4 4471 aa11.41□□□□□ -0.58
SIK3-211ENST00000485363 FNDC10F2Z333 226 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 H3BRN7 92 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 TSC22D2O75157 780 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 HYPMO75409 117 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 CCNKO75909 580 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 LINC00869P0C866 280 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 SPART-AS1P0CW21 52 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 RRAS2P62070 204 aaPredicted RBP11.4□□□□□ -0.58
SIK3-211ENST00000485363 PRR20EP86478 221 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 PRR20CP86479 221 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 PRR20DP86480 221 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 PRR20BP86481 221 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 PRR20AP86496 221 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 S100A7AQ86SG5 101 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 C17orf77Q96MU5 243 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 SHANK2-AS3Q9BTD1 123 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 SCRT1Q9BWW7 348 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 C20orf85Q9H1P6 137 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 MGAT4CQ9UBM8 478 aa11.4□□□□□ -0.58
SIK3-211ENST00000485363 DNAH6Q9C0G6 4158 aa11.39□□□□□ -0.59
SIK3-211ENST00000485363 PLA2G10O15496 165 aa11.39□□□□□ -0.59
SIK3-211ENST00000485363 LYRM1O43325 122 aa11.39□□□□□ -0.59
SIK3-211ENST00000485363 OR5G3P0C626 314 aa11.39□□□□□ -0.59
SIK3-211ENST00000485363 RPL7P18124 248 aaKnown RBP11.39□□□□□ -0.59
SIK3-211ENST00000485363 EMP1P54849 157 aa11.39□□□□□ -0.59
SIK3-211ENST00000485363 PLP1P60201 277 aa11.39□□□□□ -0.59
SIK3-211ENST00000485363 FGL1Q08830 312 aa11.39□□□□□ -0.59
SIK3-211ENST00000485363 TEPPQ6URK8 271 aa11.39□□□□□ -0.59
SIK3-211ENST00000485363 RCL1Q9Y2P8 373 aaKnown RBP11.39□□□□□ -0.59
SIK3-211ENST00000485363 TEX48A0A1B0GUV7 120 aa11.38□□□□□ -0.59
SIK3-211ENST00000485363 A8MTW9 85 aa11.38□□□□□ -0.59
SIK3-211ENST00000485363 K7EPK0 472 aa11.38□□□□□ -0.59
SIK3-211ENST00000485363 DUSP14O95147 198 aaKnown RBP11.38□□□□□ -0.59
SIK3-211ENST00000485363 HBE1P02100 147 aa11.38□□□□□ -0.59
SIK3-211ENST00000485363 AMBPP02760 352 aa11.38□□□□□ -0.59
SIK3-211ENST00000485363 ZNF846Q147U1 533 aa11.38□□□□□ -0.59
SIK3-211ENST00000485363 RNF24Q9Y225 148 aa11.38□□□□□ -0.59
SIK3-211ENST00000485363 TRAV8-2A0A0B4J237 113 aa11.37□□□□□ -0.59
SIK3-211ENST00000485363 MBPP02686 304 aaPredicted RBP11.37□□□□□ -0.59
SIK3-211ENST00000485363 TCRBP04435 133 aa11.37□□□□□ -0.59
SIK3-211ENST00000485363 SLC38A11Q08AI6 406 aa11.37□□□□□ -0.59
SIK3-211ENST00000485363 C1orf158Q8N1D5 194 aa11.37□□□□□ -0.59
SIK3-211ENST00000485363 UHRF2Q96PU4 802 aa11.37□□□□□ -0.59
SIK3-211ENST00000485363 NDUFAF3Q9BU61 184 aa11.37□□□□□ -0.59
SIK3-211ENST00000485363 ARL6Q9H0F7 186 aa11.37□□□□□ -0.59
SIK3-211ENST00000485363 C7orf66A4D0T2 115 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 L7N2F9 121 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 CCSO14618 274 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 CNN1P51911 297 aaKnown RBP11.36□□□□□ -0.59
SIK3-211ENST00000485363 VAMP2P63027 116 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 RRN3P1Q2M238 152 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 PXDC1Q5TGL8 231 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 IGFL4Q6B9Z1 124 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 AMTNQ6UX39 209 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 ZNF546Q86UE3 836 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 RNF182Q8N6D2 247 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 ZNF738Q8NE65 137 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 IGF2BP2-AS1Q96M15 143 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 TMEM208Q9BTX3 173 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 GGACTQ9BVM4 153 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 DKK2Q9UBU2 259 aa11.36□□□□□ -0.59
SIK3-211ENST00000485363 TRAV6A0A075B6T7 132 aa11.35□□□□□ -0.59
SIK3-211ENST00000485363 A0A087X0K7 114 aa11.35□□□□□ -0.59
SIK3-211ENST00000485363 LOC102723971A0A1B0GUV8 181 aa11.35□□□□□ -0.59
SIK3-211ENST00000485363 FAM25EA8MYX2 175 aa11.35□□□□□ -0.59
SIK3-211ENST00000485363 GOSR2O14653 212 aa11.35□□□□□ -0.59
SIK3-211ENST00000485363 FAM222AQ5U5X8 452 aa11.35□□□□□ -0.59
SIK3-211ENST00000485363 LRRC20Q8TCA0 184 aa11.35□□□□□ -0.59
SIK3-211ENST00000485363 ZNF431Q8TF32 576 aaPredicted RBP11.35□□□□□ -0.59
SIK3-211ENST00000485363 NIPSNAP3BQ9BS92 247 aa11.35□□□□□ -0.59
SIK3-211ENST00000485363 ARV1Q9H2C2 271 aa11.35□□□□□ -0.59
SIK3-211ENST00000485363 NUDT15Q9NV35 164 aa11.35□□□□□ -0.59
SIK3-211ENST00000485363 ARL16Q0P5N6 197 aa11.34□□□□□ -0.59
SIK3-211ENST00000485363 PATE2Q6UY27 113 aa11.34□□□□□ -0.59
SIK3-211ENST00000485363 OR11H7Q8NGC8 314 aa11.34□□□□□ -0.59
SIK3-211ENST00000485363 CCDC32Q9BV29 185 aa11.34□□□□□ -0.59
SIK3-211ENST00000485363 LSM5Q9Y4Y9 91 aaKnown RBP11.34□□□□□ -0.59
SIK3-211ENST00000485363 YTHDF2Q9Y5A9 579 aaKnown RBP11.34□□□□□ -0.59
SIK3-211ENST00000485363 C5orf51A6NDU8 294 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 M0R2Z0 102 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 AGPAT2O15120 278 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 INSP01308 110 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 P0DMU3 169 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 FAM231AP0DMU4 169 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 FAM231CP0DMU5 169 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 CXCL3P19876 107 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 BCAP31P51572 246 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 OXA1LQ15070 435 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 SPINK13Q1W4C9 94 aa11.33□□□□□ -0.6
SIK3-211ENST00000485363 FAM210BQ96KR6 192 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms