RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 C5orf17Q8NAS9 161 aa12.96□□□□□ -0.33
CTSA-207ENST00000484855 ZNF414Q96IQ9 312 aa12.96□□□□□ -0.33
CTSA-207ENST00000484855 ATP6V0BQ99437 205 aa12.96□□□□□ -0.33
CTSA-207ENST00000484855 ZFAND3Q9H8U3 227 aa12.96□□□□□ -0.33
CTSA-207ENST00000484855 EPDR1Q9UM22 224 aa12.96□□□□□ -0.33
CTSA-207ENST00000484855 RPH3ALQ9UNE2 315 aa12.96□□□□□ -0.33
CTSA-207ENST00000484855 IGHV3OR16-8A0A075B7F1 116 aa12.96□□□□□ -0.34
CTSA-207ENST00000484855 PPP1R2P9O14990 202 aa12.96□□□□□ -0.34
CTSA-207ENST00000484855 MRPS12O15235 138 aaKnown RBP12.96□□□□□ -0.34
CTSA-207ENST00000484855 S100A7P31151 101 aa12.96□□□□□ -0.34
CTSA-207ENST00000484855 GALR1P47211 349 aa12.96□□□□□ -0.34
CTSA-207ENST00000484855 TAS2R60P59551 318 aa12.96□□□□□ -0.34
CTSA-207ENST00000484855 IGF2BP2-AS1Q96M15 143 aa12.96□□□□□ -0.34
CTSA-207ENST00000484855 OTORQ9NRC9 128 aa12.96□□□□□ -0.34
CTSA-207ENST00000484855 CDC42EP3Q9UKI2 254 aa12.96□□□□□ -0.34
CTSA-207ENST00000484855 TRBV19A0A075B6N1 114 aa12.95□□□□□ -0.34
CTSA-207ENST00000484855 LOC105371267A0A1B0GV96 52 aa12.95□□□□□ -0.34
CTSA-207ENST00000484855 PF4V1P10720 104 aa12.95□□□□□ -0.34
CTSA-207ENST00000484855 S100PP25815 95 aa12.95□□□□□ -0.34
CTSA-207ENST00000484855 RELQ04864 619 aaPredicted RBP12.95□□□□□ -0.34
CTSA-207ENST00000484855 TMEM95Q3KNT9 176 aa12.95□□□□□ -0.34
CTSA-207ENST00000484855 TEX38Q6PEX7 206 aa12.95□□□□□ -0.34
CTSA-207ENST00000484855 LINC00479Q96M42 142 aa12.95□□□□□ -0.34
CTSA-207ENST00000484855 ZNF580Q9UK33 172 aa12.95□□□□□ -0.34
CTSA-207ENST00000484855 GCN1Q92616 2671 aaKnown RBP12.95□□□□□ -0.34
CTSA-207ENST00000484855 USMG5Q96IX5 58 aa12.94□□□□□ -0.34
CTSA-207ENST00000484855 FOXC2Q99958 501 aa12.94□□□□□ -0.34
CTSA-207ENST00000484855 C1orf196B1AJZ1 125 aa12.94□□□□□ -0.34
CTSA-207ENST00000484855 PPP5D1E7EU14 171 aa12.94□□□□□ -0.34
CTSA-207ENST00000484855 HOXA3O43365 443 aaPredicted RBP12.94□□□□□ -0.34
CTSA-207ENST00000484855 CFHR3Q02985 330 aa12.94□□□□□ -0.34
CTSA-207ENST00000484855 ATG101Q9BSB4 218 aa12.94□□□□□ -0.34
CTSA-207ENST00000484855 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 IGLV1-40P01703 118 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 PFN1P07737 140 aaKnown RBP12.93□□□□□ -0.34
CTSA-207ENST00000484855 RPL7P18124 248 aaKnown RBP12.93□□□□□ -0.34
CTSA-207ENST00000484855 RPS10P46783 165 aaKnown RBP12.93□□□□□ -0.34
CTSA-207ENST00000484855 FLI1Q01543 452 aaPredicted RBP12.93□□□□□ -0.34
CTSA-207ENST00000484855 EXOC3-AS1Q8N2X6 119 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 OR10G8Q8NGN5 311 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 C17orf77Q96MU5 243 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 ARL3P36405 182 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 RAB5BP61020 215 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 UBE2G1P62253 170 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 OR5I1Q13606 314 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 ZFP82Q8N141 532 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 FAM210BQ96KR6 192 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 KLK15Q9H2R5 256 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 PRDM13Q9H4Q3 707 aa12.93□□□□□ -0.34
CTSA-207ENST00000484855 AKAP9Q99996 3911 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 TRBV24-1A0A075B6N3 115 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 ISLRO14498 428 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 IGLV2-8P01709 118 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 TCRAP04437 139 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 SRP14P37108 136 aaKnown RBP12.92□□□□□ -0.34
CTSA-207ENST00000484855 RPL15P61313 204 aaKnown RBP12.92□□□□□ -0.34
CTSA-207ENST00000484855 TMEM183BQ1AE95 376 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 IL17RELQ6ZVW7 336 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 OR8I2Q8N0Y5 310 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 TEX29Q8N6K0 151 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 CMTM2Q8TAZ6 248 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 MXRA5Q9NR99 2828 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 CCDC168Q8NDH2 2452 aa12.92□□□□□ -0.34
CTSA-207ENST00000484855 SLC17A3O00476 420 aa12.91□□□□□ -0.34
CTSA-207ENST00000484855 MGST1P10620 155 aaKnown RBP12.91□□□□□ -0.34
CTSA-207ENST00000484855 PDE6HQ13956 83 aa12.91□□□□□ -0.34
CTSA-207ENST00000484855 KCNIP4Q6PIL6 250 aa12.91□□□□□ -0.34
CTSA-207ENST00000484855 SIGLEC15Q6ZMC9 328 aa12.91□□□□□ -0.34
CTSA-207ENST00000484855 LYPD1Q8N2G4 141 aa12.91□□□□□ -0.34
CTSA-207ENST00000484855 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
CTSA-207ENST00000484855 ERVFC1-1P60608 527 aa12.91□□□□□ -0.34
CTSA-207ENST00000484855 BAGE2Q86Y30 109 aa12.91□□□□□ -0.34
CTSA-207ENST00000484855 NHLRC2Q8NBF2 726 aa12.91□□□□□ -0.34
CTSA-207ENST00000484855 FLNAP21333 2647 aaKnown RBP12.9□□□□□ -0.34
CTSA-207ENST00000484855 A0A0G2JLM5 398 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 GCGP01275 180 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 IGHV3-11P01762 117 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 RAB9AP51151 201 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 LCNL1Q6ZST4 164 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 PRSS22Q9GZN4 317 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 KLF12Q9Y4X4 402 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 ITPR2Q14571 2701 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 UNC79Q9P2D8 2635 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.9□□□□□ -0.34
CTSA-207ENST00000484855 A0A1W2PPQ1 181 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 CLPSL1A2RUU4 121 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 TRBV12-3P01733 135 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 S100A9P06702 114 aaKnown RBP12.9□□□□□ -0.34
CTSA-207ENST00000484855 FMC1Q96HJ9 113 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 SGK494Q96LW2 274 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 METTL26Q96S19 204 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 IMMP2LQ96T52 175 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 NPFFR1Q9GZQ6 430 aa12.9□□□□□ -0.34
CTSA-207ENST00000484855 C1QL4Q86Z23 238 aa12.89□□□□□ -0.35
CTSA-207ENST00000484855 SIGLECL1Q8N7X8 197 aa12.89□□□□□ -0.35
CTSA-207ENST00000484855 BUB3O43684 328 aa12.88□□□□□ -0.35
CTSA-207ENST00000484855 IGHG4P01861 327 aa12.88□□□□□ -0.35
CTSA-207ENST00000484855 OR4X2Q8NGF9 303 aa12.88□□□□□ -0.35
CTSA-207ENST00000484855 PYGO2Q9BRQ0 406 aa12.88□□□□□ -0.35
CTSA-207ENST00000484855 AAMDCQ9H7C9 122 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms