RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 IGKV3D-7A0A0C4DH55 119 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 IGKV3OR2-268A0A0C4DH90 116 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 IGKV2-29A2NJV5 120 aaPredicted RBP1.38□□□□□ -2.19
SMC4-215ENST00000484799 C17orf112F2Z3M2 114 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 H0YJX3 145 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 H3BQV1 296 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 HIST1H2BKO60814 126 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 FAM107AO95990 144 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 HIST1H2BJP06899 126 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 OR10J4P0C629 311 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 RNASE3P12724 160 aaKnown RBP1.38□□□□□ -2.19
SMC4-215ENST00000484799 INSL3P51460 131 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 CDK5R1Q15078 307 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 LTC4SQ16873 150 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 FKBP1CQ5VVH2 108 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 ANGPTL5Q86XS5 388 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 Q8N2B8 174 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 OR5D16Q8NGK9 328 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 TMEM254Q8TBM7 123 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 ZNF418Q8TF45 676 aaPredicted RBP1.38□□□□□ -2.19
SMC4-215ENST00000484799 OR52A1Q9UKL2 312 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 LAMTOR2Q9Y2Q5 125 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 SNURFQ9Y675 71 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 KDM6AO15550 1401 aaPredicted RBP1.38□□□□□ -2.19
SMC4-215ENST00000484799 TNS3Q68CZ2 1445 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 INTS1Q8N201 2190 aaKnown RBP1.38□□□□□ -2.19
SMC4-215ENST00000484799 SCN8AQ9UQD0 1980 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 CEP164Q9UPV0 1460 aa1.37□□□□□ -2.19
SMC4-215ENST00000484799 IGKV2-40A0A087WW87 121 aaPredicted RBP1.37□□□□□ -2.19
SMC4-215ENST00000484799 CST7O76096 145 aa1.37□□□□□ -2.19
SMC4-215ENST00000484799 IGKV2D-40P01614 121 aaPredicted RBP1.37□□□□□ -2.19
SMC4-215ENST00000484799 C2orf82Q6UX34 121 aa1.37□□□□□ -2.19
SMC4-215ENST00000484799 PHF5AQ7RTV0 110 aaKnown RBP1.37□□□□□ -2.19
SMC4-215ENST00000484799 Q8IYB0 196 aa1.37□□□□□ -2.19
SMC4-215ENST00000484799 OR2T35Q8NGX2 323 aa1.37□□□□□ -2.19
SMC4-215ENST00000484799 ZNF714Q96N38 554 aa1.37□□□□□ -2.19
SMC4-215ENST00000484799 REG4Q9BYZ8 158 aa1.37□□□□□ -2.19
SMC4-215ENST00000484799 OR2H1Q9GZK4 316 aa1.37□□□□□ -2.19
SMC4-215ENST00000484799 NISCHQ9Y2I1 1504 aa1.36□□□□□ -2.19
SMC4-215ENST00000484799 GNG14A0A1W2PPG7 69 aa1.36□□□□□ -2.19
SMC4-215ENST00000484799 A0A1W2PRE2 83 aa1.36□□□□□ -2.19
SMC4-215ENST00000484799 TSTD3H0UI37 97 aa1.36□□□□□ -2.19
SMC4-215ENST00000484799 TMBIM6P55061 237 aa1.36□□□□□ -2.19
SMC4-215ENST00000484799 DSCR4P56555 118 aaPredicted RBP1.36□□□□□ -2.19
SMC4-215ENST00000484799 C1orf137Q5JT78 98 aa1.36□□□□□ -2.19
SMC4-215ENST00000484799 PATE2Q6UY27 113 aa1.36□□□□□ -2.19
SMC4-215ENST00000484799 C4orf22Q6V702 233 aa1.36□□□□□ -2.19
SMC4-215ENST00000484799 PRR15Q8IV56 129 aa1.36□□□□□ -2.19
SMC4-215ENST00000484799 SKA2Q8WVK7 121 aaPredicted RBP1.36□□□□□ -2.19
SMC4-215ENST00000484799 CACYBPQ9HB71 228 aaKnown RBP1.36□□□□□ -2.19
SMC4-215ENST00000484799 KLK9Q9UKQ9 250 aa1.36□□□□□ -2.19
SMC4-215ENST00000484799 ARHGEF11O15085 1522 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 TECPR2O15040 1411 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 IGKV3-7A0A075B6H7 116 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 A0A087WX48 190 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 TCRBV4S1A1TA0A5B7 111 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 CXCL1P09341 107 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 BCL2P10415 239 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 RPL35P42766 123 aaKnown RBP1.35□□□□□ -2.19
SMC4-215ENST00000484799 RAB5CP51148 216 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 ARPP19P56211 112 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 ROMO1P60602 79 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 HBBP68871 147 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 KLRD1Q13241 179 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 DEFB113Q30KQ7 82 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 TAC4Q86UU9 113 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 OR5D14Q8NGL3 314 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 BORCS8Q96FH0 119 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 MCEEQ96PE7 176 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 TP53RKQ96S44 253 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 RETNLBQ9BQ08 111 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 TCEAL2Q9H3H9 227 aaPredicted RBP1.35□□□□□ -2.19
SMC4-215ENST00000484799 MRPL40Q9NQ50 206 aaKnown RBP1.35□□□□□ -2.19
SMC4-215ENST00000484799 ARFGEF3Q5TH69 2177 aa1.35□□□□□ -2.19
SMC4-215ENST00000484799 DIDO1Q9BTC0 2240 aaKnown RBP1.35□□□□□ -2.19
SMC4-215ENST00000484799 TRAPPC8Q9Y2L5 1435 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 TRDV1A0A1B0GX56 115 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 E7EUB6 86 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 HCRTO43612 131 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 S100GP29377 79 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 AKAP14Q86UN6 197 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 ST6GALNAC3Q8NDV1 305 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 OR9Q1Q8NGQ5 310 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 OR4K15Q8NH41 348 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 EFCAB11Q9BUY7 163 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 SPANXA1Q9NS26 97 aa1.34□□□□□ -2.19
SMC4-215ENST00000484799 MYLKQ15746 1914 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 A0A087WSZ3 146 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 RER1O15258 196 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 LYRM1O43325 122 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 CDK6Q00534 326 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 EIF3IQ13347 325 aaKnown RBP1.33□□□□□ -2.2
SMC4-215ENST00000484799 SURF2Q15527 256 aaPredicted RBP1.33□□□□□ -2.2
SMC4-215ENST00000484799 TMEM128Q5BJH2 165 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 SAMD13Q5VXD3 122 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 ZNF431Q8TF32 576 aaPredicted RBP1.33□□□□□ -2.2
SMC4-215ENST00000484799 THEM6Q8WUY1 208 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 CHCHD1Q96BP2 118 aaKnown RBP1.33□□□□□ -2.2
SMC4-215ENST00000484799 MUCL1Q96DR8 90 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 NDUFAF1Q9Y375 327 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms