RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 RTL8CO15255 209 aa8.14□□□□□ -1.11
SCFD1-206ENST00000484733 IFNA21P01568 189 aa8.14□□□□□ -1.11
SCFD1-206ENST00000484733 ORM2P19652 201 aa8.14□□□□□ -1.11
SCFD1-206ENST00000484733 TRAV8-2A0A0B4J237 113 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 C9orf170A2RU37 121 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 FNDC10F2Z333 226 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 GATA2P23769 480 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-206ENST00000484733 AKR1C1Q04828 323 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 CYP2G1PQ6ZSU1 146 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 SLC25A22Q9H936 323 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 YTHDF2Q9Y5A9 579 aaKnown RBP8.13□□□□□ -1.11
SCFD1-206ENST00000484733 NAP1L6A6NFF2 107 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 PMS2P5A8MQ11 134 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 GSG1LQ6UXU4 331 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 Q6ZR54 194 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 ACOT7LQ6ZUV0 252 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 OR11H7Q8NGC8 314 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 SMIM8Q96KF7 97 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 SHANK2-AS3Q9BTD1 123 aa8.13□□□□□ -1.11
SCFD1-206ENST00000484733 PRSS29PA6NIE9 313 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 SELENOTP62341 195 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 S100A7AQ86SG5 101 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 SLC25A39Q9BZJ4 359 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-206ENST00000484733 PSENENQ9NZ42 101 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 A0A087X0K7 114 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 LYRM9A8MSI8 78 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 K7EPK0 472 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 CRXO43186 299 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-206ENST00000484733 NDUFB6O95139 128 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 RPL7P18124 248 aaKnown RBP8.12□□□□□ -1.11
SCFD1-206ENST00000484733 TSPOP30536 169 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 CNN1P51911 297 aaKnown RBP8.12□□□□□ -1.11
SCFD1-206ENST00000484733 FAM3BP58499 235 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-206ENST00000484733 DAD1P61803 113 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 DLK1P80370 383 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 SRRQ9GZT4 340 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 PLA2G2EQ9NZK7 142 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 RNF24Q9Y225 148 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 HIGD1AQ9Y241 93 aa8.12□□□□□ -1.11
SCFD1-206ENST00000484733 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 HYPMO75409 117 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 INSP01308 110 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 RAP2BP61225 183 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 POLR2GP62487 172 aaKnown RBP eCLIP8.11□□□□□ -1.11
SCFD1-206ENST00000484733 UBE2DNLQ8IWF7 75 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 C15orf53Q8NAA6 179 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 H3BP45 60 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 ADAP1O75689 374 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 IL5P05113 134 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 TMEM14EPQ6UXP3 125 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 TMEM208Q9BTX3 173 aa8.11□□□□□ -1.11
SCFD1-206ENST00000484733 ZNF701M0R085 212 aaPredicted RBP8.1□□□□□ -1.11
SCFD1-206ENST00000484733 M0R2N4 97 aa8.1□□□□□ -1.11
SCFD1-206ENST00000484733 TAS2R30P59541 319 aa8.1□□□□□ -1.11
SCFD1-206ENST00000484733 CNPY1Q3B7I2 92 aa8.1□□□□□ -1.11
SCFD1-206ENST00000484733 SPANXN2Q5MJ10 180 aa8.1□□□□□ -1.11
SCFD1-206ENST00000484733 PXDC1Q5TGL8 231 aa8.1□□□□□ -1.11
SCFD1-206ENST00000484733 TMEM88Q6PEY1 159 aa8.1□□□□□ -1.11
SCFD1-206ENST00000484733 RBM38Q9H0Z9 239 aaKnown RBP8.1□□□□□ -1.11
SCFD1-206ENST00000484733 NPVFQ9HCQ7 196 aa8.1□□□□□ -1.11
SCFD1-206ENST00000484733 BOLA2-SMG1P6H3BVE0 249 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 OR4E1P0C645 316 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 PSG3Q16557 428 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 SPINK13Q1W4C9 94 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 C4orf46Q504U0 113 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 TMEM256Q8N2U0 113 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 KIAA1109Q2LD37 5005 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 SMCO3A2RU48 225 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 ZNF705GA8MUZ8 300 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-206ENST00000484733 M0R2Z0 102 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 MRPS12O15235 138 aaKnown RBP8.09□□□□□ -1.11
SCFD1-206ENST00000484733 LINC00869P0C866 280 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 MED14OSP0DP75 135 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 HTN3P15516 51 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 CXCL2P19875 107 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 IGFL4Q6B9Z1 124 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 RNF182Q8N6D2 247 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 ZNF738Q8NE65 137 aa8.09□□□□□ -1.11
SCFD1-206ENST00000484733 CCDC160A6NGH7 325 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 TSC22D2O75157 780 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 CXCL3P19876 107 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 BAK1Q16611 211 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 PATE2Q6UY27 113 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 OR8A1Q8NGG7 326 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 GGACTQ9BVM4 153 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 FLVCR2Q9UPI3 526 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 PKD1P98161 4303 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 PLAC8L1A1L4L8 177 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 SSSCA1O60232 199 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 CCNKO75909 580 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 OR5G3P0C626 314 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 INPP1P49441 399 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 SOHLH1Q5JUK2 328 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 TRIQKQ629K1 86 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 TEPPQ6URK8 271 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 OR10P1Q8NGE3 313 aa8.08□□□□□ -1.12
SCFD1-206ENST00000484733 TAS2R60P59551 318 aa8.07□□□□□ -1.12
SCFD1-206ENST00000484733 FGL1Q08830 312 aa8.07□□□□□ -1.12
SCFD1-206ENST00000484733 ZBTB8BQ8NAP8 495 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-206ENST00000484733 MGAT4CQ9UBM8 478 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms