RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 SSSCA1O60232 199 aa13.8□□□□□ -0.2
NDUFA3-213ENST00000484103 SCGB1D2O95969 90 aa13.8□□□□□ -0.2
NDUFA3-213ENST00000484103 PRB4P10163 310 aaPredicted RBP13.8□□□□□ -0.2
NDUFA3-213ENST00000484103 FGL1Q08830 312 aa13.8□□□□□ -0.2
NDUFA3-213ENST00000484103 C1orf194Q5T5A4 169 aa13.8□□□□□ -0.2
NDUFA3-213ENST00000484103 FAM78BQ5VT40 261 aa13.8□□□□□ -0.2
NDUFA3-213ENST00000484103 EBLN2Q6P2I7 272 aa13.8□□□□□ -0.2
NDUFA3-213ENST00000484103 ZBTB8BQ8NAP8 495 aaPredicted RBP13.8□□□□□ -0.2
NDUFA3-213ENST00000484103 OR4D5Q8NGN0 318 aa13.8□□□□□ -0.2
NDUFA3-213ENST00000484103 PRSS46E5RG02 174 aa13.79□□□□□ -0.2
NDUFA3-213ENST00000484103 GOSR2O14653 212 aa13.79□□□□□ -0.2
NDUFA3-213ENST00000484103 TCTAP57738 103 aa13.79□□□□□ -0.2
NDUFA3-213ENST00000484103 RRAS2P62070 204 aaPredicted RBP13.79□□□□□ -0.2
NDUFA3-213ENST00000484103 IAH1Q2TAA2 248 aaPredicted RBP13.79□□□□□ -0.2
NDUFA3-213ENST00000484103 ZNF709Q8N972 641 aa13.79□□□□□ -0.2
NDUFA3-213ENST00000484103 BPIFCQ8NFQ6 507 aa13.79□□□□□ -0.2
NDUFA3-213ENST00000484103 TMEM147Q9BVK8 224 aa13.79□□□□□ -0.2
NDUFA3-213ENST00000484103 PSENENQ9NZ42 101 aa13.79□□□□□ -0.2
NDUFA3-213ENST00000484103 PLA2G2EQ9NZK7 142 aa13.79□□□□□ -0.2
NDUFA3-213ENST00000484103 ZNF98A6NK75 572 aa13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 CCNKO75909 580 aa13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 ZNF705DP0CH99 300 aaPredicted RBP13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 ZNF705BP0CI00 300 aaPredicted RBP13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 HTN3P15516 51 aa13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 GALR1P47211 349 aa13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 IL15RAQ13261 267 aa13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 FCN2Q15485 313 aa13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 C2orf50Q96LR7 162 aa13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 MED28Q9H204 178 aa13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 MGAT4CQ9UBM8 478 aa13.78□□□□□ -0.2
NDUFA3-213ENST00000484103 C5orf51A6NDU8 294 aa13.77□□□□□ -0.21
NDUFA3-213ENST00000484103 ISLRO14498 428 aa13.77□□□□□ -0.21
NDUFA3-213ENST00000484103 H2BFSP57053 126 aa13.77□□□□□ -0.21
NDUFA3-213ENST00000484103 PSG9Q00887 426 aa13.77□□□□□ -0.21
NDUFA3-213ENST00000484103 ID3Q02535 119 aa13.77□□□□□ -0.21
NDUFA3-213ENST00000484103 ZNF705AQ6ZN79 300 aaPredicted RBP13.77□□□□□ -0.21
NDUFA3-213ENST00000484103 RNF182Q8N6D2 247 aa13.77□□□□□ -0.21
NDUFA3-213ENST00000484103 OR11H7Q8NGC8 314 aa13.77□□□□□ -0.21
NDUFA3-213ENST00000484103 RPRMQ9NS64 109 aa13.77□□□□□ -0.21
NDUFA3-213ENST00000484103 DNAH6Q9C0G6 4158 aa13.76□□□□□ -0.21
NDUFA3-213ENST00000484103 ZNF705FA8MVS1 300 aaPredicted RBP13.76□□□□□ -0.21
NDUFA3-213ENST00000484103 FAM25EA8MYX2 175 aa13.76□□□□□ -0.21
NDUFA3-213ENST00000484103 SIX6O95475 246 aa13.76□□□□□ -0.21
NDUFA3-213ENST00000484103 SPART-AS1P0CW21 52 aa13.76□□□□□ -0.21
NDUFA3-213ENST00000484103 CXCL3P19876 107 aa13.76□□□□□ -0.21
NDUFA3-213ENST00000484103 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.76□□□□□ -0.21
NDUFA3-213ENST00000484103 A0A0J9YX75 114 aa13.75□□□□□ -0.21
NDUFA3-213ENST00000484103 OR5G3P0C626 314 aa13.75□□□□□ -0.21
NDUFA3-213ENST00000484103 METTL15P1P0C7V9 234 aa13.75□□□□□ -0.21
NDUFA3-213ENST00000484103 FAM222AQ5U5X8 452 aa13.75□□□□□ -0.21
NDUFA3-213ENST00000484103 CYP2G1PQ6ZSU1 146 aa13.75□□□□□ -0.21
NDUFA3-213ENST00000484103 RNF126Q9BV68 326 aa13.75□□□□□ -0.21
NDUFA3-213ENST00000484103 NMES1Q9C002 83 aa13.75□□□□□ -0.21
NDUFA3-213ENST00000484103 GOLT1BQ9Y3E0 138 aa13.75□□□□□ -0.21
NDUFA3-213ENST00000484103 RFNGQ9Y644 331 aa13.75□□□□□ -0.21
NDUFA3-213ENST00000484103 CFDP00746 253 aaPredicted RBP13.74□□□□□ -0.21
NDUFA3-213ENST00000484103 PRM2P04554 102 aa13.74□□□□□ -0.21
NDUFA3-213ENST00000484103 MEOX2P50222 304 aa13.74□□□□□ -0.21
NDUFA3-213ENST00000484103 C1orf158Q8N1D5 194 aa13.74□□□□□ -0.21
NDUFA3-213ENST00000484103 C17orf77Q96MU5 243 aa13.74□□□□□ -0.21
NDUFA3-213ENST00000484103 UHRF2Q96PU4 802 aa13.74□□□□□ -0.21
NDUFA3-213ENST00000484103 TMEM208Q9BTX3 173 aa13.74□□□□□ -0.21
NDUFA3-213ENST00000484103 NDUFAF3Q9BU61 184 aa13.74□□□□□ -0.21
NDUFA3-213ENST00000484103 GSKIPQ9P0R6 139 aa13.74□□□□□ -0.21
NDUFA3-213ENST00000484103 LOC102723971A0A1B0GUV8 181 aa13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 M0R2N4 97 aa13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 M0R2Z0 102 aa13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 HBE1P02100 147 aa13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 MBPP02686 304 aaPredicted RBP13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 AMBPP02760 352 aa13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 SNRPCP09234 159 aaKnown RBP13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 LINC00869P0C866 280 aa13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 SPINK13Q1W4C9 94 aa13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 NEU1Q99519 415 aa13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 RCL1Q9Y2P8 373 aaKnown RBP13.73□□□□□ -0.21
NDUFA3-213ENST00000484103 PAX9P55771 341 aa13.72□□□□□ -0.21
NDUFA3-213ENST00000484103 RAP2BP61225 183 aa13.72□□□□□ -0.21
NDUFA3-213ENST00000484103 CYCSP99999 105 aaKnown RBP13.72□□□□□ -0.21
NDUFA3-213ENST00000484103 SLC38A11Q08AI6 406 aa13.72□□□□□ -0.21
NDUFA3-213ENST00000484103 TMEM144Q7Z5S9 345 aa13.72□□□□□ -0.21
NDUFA3-213ENST00000484103 ZNF738Q8NE65 137 aa13.72□□□□□ -0.21
NDUFA3-213ENST00000484103 ASB13Q8WXK3 278 aa13.72□□□□□ -0.21
NDUFA3-213ENST00000484103 SLC25A39Q9BZJ4 359 aaPredicted RBP13.72□□□□□ -0.21
NDUFA3-213ENST00000484103 HIGD1AQ9Y241 93 aa13.72□□□□□ -0.21
NDUFA3-213ENST00000484103 YTHDF2Q9Y5A9 579 aaKnown RBP13.72□□□□□ -0.21
NDUFA3-213ENST00000484103 TMEM189A5PLL7 270 aa13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 SMIM9A6NGZ8 99 aa13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 H3BRN7 92 aa13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 K7EPK0 472 aa13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 CNN1P51911 297 aaKnown RBP13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 SPATA31B1PQ5VZV4 182 aa13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 CHAC2Q8WUX2 184 aa13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 NIPSNAP3BQ9BS92 247 aa13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 C11orf1Q9H5F2 150 aa13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 DKK2Q9UBU2 259 aa13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 SLC45A2Q9UMX9 530 aa13.71□□□□□ -0.21
NDUFA3-213ENST00000484103 TRAV12-2A0A075B6T6 113 aa13.7□□□□□ -0.22
NDUFA3-213ENST00000484103 TRAV8-2A0A0B4J237 113 aa13.7□□□□□ -0.22
NDUFA3-213ENST00000484103 A0A1B0GVG6 124 aa13.7□□□□□ -0.22
NDUFA3-213ENST00000484103 PMS2P5A8MQ11 134 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms