RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 MEOX2P50222 304 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 CCR6P51684 374 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 LINC00315P59091 139 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 TAS2R19P59542 299 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 KRTAP10-1P60331 282 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 B2MP61769 119 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 OR5I1Q13606 314 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 Q5VSD8 79 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 RNASE8Q8TDE3 154 aaKnown RBP8.85□□□□□ -0.99
UBR4-213ENST00000483922 RXFP4Q8TDU9 374 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 PPP1R14BQ96C90 147 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 SLC35E1Q96K37 410 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 Q9H521 79 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 C14orf166Q9Y224 244 aaKnown RBP8.85□□□□□ -0.99
UBR4-213ENST00000483922 TIMM8BQ9Y5J9 83 aaPredicted RBP8.85□□□□□ -0.99
UBR4-213ENST00000483922 A0A1W2PPQ1 181 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 BOLA2-SMG1P6H3BVE0 249 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 PITX3O75364 302 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 TNFAIP8O95379 198 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 HTN1P15515 57 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 GALR1P47211 349 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 TAS2R60P59551 318 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 SMCO1Q147U7 214 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 SURF2Q15527 256 aaPredicted RBP8.84□□□□□ -0.99
UBR4-213ENST00000483922 OR4D5Q8NGN0 318 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 IL22RA2Q969J5 263 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 GNPNAT1Q96EK6 184 aaPredicted RBP8.84□□□□□ -0.99
UBR4-213ENST00000483922 NAA50Q9GZZ1 169 aaKnown RBP8.84□□□□□ -0.99
UBR4-213ENST00000483922 MDFICQ9P1T7 246 aa8.84□□□□□ -0.99
UBR4-213ENST00000483922 ORM2P19652 201 aa8.83□□□□□ -1
UBR4-213ENST00000483922 TTC32Q5I0X7 151 aa8.83□□□□□ -1
UBR4-213ENST00000483922 OR8A1Q8NGG7 326 aa8.83□□□□□ -1
UBR4-213ENST00000483922 ZNF503Q96F45 646 aa8.83□□□□□ -1
UBR4-213ENST00000483922 VSIG2Q96IQ7 327 aa8.83□□□□□ -1
UBR4-213ENST00000483922 MRPS16Q9Y3D3 137 aaKnown RBP8.83□□□□□ -1
UBR4-213ENST00000483922 GABARAPH6UMI1 98 aa8.82□□□□□ -1
UBR4-213ENST00000483922 GABARAPO95166 117 aa8.82□□□□□ -1
UBR4-213ENST00000483922 SMR3BP02814 79 aaPredicted RBP8.82□□□□□ -1
UBR4-213ENST00000483922 IAPPP10997 89 aa8.82□□□□□ -1
UBR4-213ENST00000483922 M6PRP20645 277 aa8.82□□□□□ -1
UBR4-213ENST00000483922 FGL1Q08830 312 aa8.82□□□□□ -1
UBR4-213ENST00000483922 SAMD13Q5VXD3 122 aa8.82□□□□□ -1
UBR4-213ENST00000483922 TMEM144Q7Z5S9 345 aa8.82□□□□□ -1
UBR4-213ENST00000483922 OR1B1Q8NGR6 318 aa8.82□□□□□ -1
UBR4-213ENST00000483922 C16orf74Q96GX8 76 aa8.82□□□□□ -1
UBR4-213ENST00000483922 PARD6GQ9BYG4 376 aaPredicted RBP8.82□□□□□ -1
UBR4-213ENST00000483922 PGPEP1Q9NXJ5 209 aa8.82□□□□□ -1
UBR4-213ENST00000483922 SLC45A2Q9UMX9 530 aa8.82□□□□□ -1
UBR4-213ENST00000483922 A0A0B4J2A0 478 aa8.81□□□□□ -1
UBR4-213ENST00000483922 H3BRN7 92 aa8.81□□□□□ -1
UBR4-213ENST00000483922 CXCL3P19876 107 aa8.81□□□□□ -1
UBR4-213ENST00000483922 ATP5IP56385 69 aaPredicted RBP8.81□□□□□ -1
UBR4-213ENST00000483922 HIST1H1AQ02539 215 aaPredicted RBP8.81□□□□□ -1
UBR4-213ENST00000483922 CTF1Q16619 201 aa8.81□□□□□ -1
UBR4-213ENST00000483922 GGNBP1Q5YKI7 109 aa8.81□□□□□ -1
UBR4-213ENST00000483922 ZNF738Q8NE65 137 aa8.81□□□□□ -1
UBR4-213ENST00000483922 OR51S1Q8NGJ8 323 aa8.81□□□□□ -1
UBR4-213ENST00000483922 CACFD1Q9UGQ2 172 aa8.81□□□□□ -1
UBR4-213ENST00000483922 SHPKQ9UHJ6 478 aa8.81□□□□□ -1
UBR4-213ENST00000483922 A0A096LPF7 62 aa8.8□□□□□ -1
UBR4-213ENST00000483922 GAGE12BA1L429 117 aa8.8□□□□□ -1
UBR4-213ENST00000483922 DISC1C4P0D8 188 aa8.8□□□□□ -1
UBR4-213ENST00000483922 CTDSP2O14595 271 aa8.8□□□□□ -1
UBR4-213ENST00000483922 GAGE7O76087 117 aa8.8□□□□□ -1
UBR4-213ENST00000483922 FABP1P07148 127 aa8.8□□□□□ -1
UBR4-213ENST00000483922 GAGE12FP0CL80 117 aa8.8□□□□□ -1
UBR4-213ENST00000483922 GAGE12GP0CL81 117 aa8.8□□□□□ -1
UBR4-213ENST00000483922 GAGE12IP0CL82 117 aa8.8□□□□□ -1
UBR4-213ENST00000483922 DNAH10OSP0CZ25 163 aa8.8□□□□□ -1
UBR4-213ENST00000483922 ZNF182P17025 639 aaPredicted RBP8.8□□□□□ -1
UBR4-213ENST00000483922 RHOBP62745 196 aa8.8□□□□□ -1
UBR4-213ENST00000483922 MZT2AQ6P582 158 aa8.8□□□□□ -1
UBR4-213ENST00000483922 ZNF493Q6ZR52 646 aa8.8□□□□□ -1
UBR4-213ENST00000483922 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
UBR4-213ENST00000483922 TMEM263Q8WUH6 116 aaKnown RBP8.8□□□□□ -1
UBR4-213ENST00000483922 KCNIP3Q9Y2W7 256 aa8.8□□□□□ -1
UBR4-213ENST00000483922 LRP1Q07954 4544 aaKnown RBP8.8□□□□□ -1
UBR4-213ENST00000483922 A0A087WXM4 84 aa8.79□□□□□ -1
UBR4-213ENST00000483922 PRAC2D3DTV9 90 aa8.79□□□□□ -1
UBR4-213ENST00000483922 H3BNG1 76 aa8.79□□□□□ -1
UBR4-213ENST00000483922 MRPS12O15235 138 aaKnown RBP8.79□□□□□ -1
UBR4-213ENST00000483922 CFDP00746 253 aaPredicted RBP8.79□□□□□ -1
UBR4-213ENST00000483922 HAMPP81172 84 aa8.79□□□□□ -1
UBR4-213ENST00000483922 PSG3Q16557 428 aa8.79□□□□□ -1
UBR4-213ENST00000483922 PATE2Q6UY27 113 aa8.79□□□□□ -1
UBR4-213ENST00000483922 ZBTB8BQ8NAP8 495 aaPredicted RBP8.79□□□□□ -1
UBR4-213ENST00000483922 OR1S1Q8NH92 325 aa8.79□□□□□ -1
UBR4-213ENST00000483922 GPR82Q96P67 336 aa8.79□□□□□ -1
UBR4-213ENST00000483922 SHANK2-AS3Q9BTD1 123 aa8.79□□□□□ -1
UBR4-213ENST00000483922 SNRPCP09234 159 aaKnown RBP8.78□□□□□ -1
UBR4-213ENST00000483922 AKAIN1P0CW23 69 aa8.78□□□□□ -1
UBR4-213ENST00000483922 AKR1C4P17516 323 aa8.78□□□□□ -1
UBR4-213ENST00000483922 CDKN1BP46527 198 aa8.78□□□□□ -1
UBR4-213ENST00000483922 SSBP1Q04837 148 aaKnown RBP8.78□□□□□ -1
UBR4-213ENST00000483922 SMIM4Q8WVI0 70 aa8.78□□□□□ -1
UBR4-213ENST00000483922 TMPRSS5Q9H3S3 457 aa8.78□□□□□ -1
UBR4-213ENST00000483922 A0A087WTM6 91 aa8.77□□□□□ -1.01
UBR4-213ENST00000483922 A0A087X0K7 114 aa8.77□□□□□ -1.01
UBR4-213ENST00000483922 ANKRD20A5PA0PJZ0 165 aa8.77□□□□□ -1.01
UBR4-213ENST00000483922 RAB11AP62491 216 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms