RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	ATP5S	Q99766	215 aa		11.15	□□□□□ -0.62
NR1H3-222	ENST00000483882	TUBA4B	Q9H853	241 aa		11.15	□□□□□ -0.62
NR1H3-222	ENST00000483882	EDA2R	Q9HAV5	297 aa		11.15	□□□□□ -0.62
NR1H3-222	ENST00000483882	RABAC1	Q9UI14	185 aa		11.15	□□□□□ -0.62
NR1H3-222	ENST00000483882	RFNG	Q9Y644	331 aa		11.15	□□□□□ -0.62
NR1H3-222	ENST00000483882	BUB3	O43684	328 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	DFFB	O76075	338 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	ORM2	P19652	201 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	ZNF266	Q14584	549 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	LCN12	Q6JVE5	192 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	C16orf54	Q6UWD8	224 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	GTSCR1	Q86UQ5	136 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	GLMP	Q8WWB7	406 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	FAM210A	Q96ND0	272 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	NPCDR1	Q9BY65	106 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	DOK5	Q9P104	306 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	TENM2	Q9NT68	2774 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	RYR2	Q92736	4967 aa		11.14	□□□□□ -0.63
NR1H3-222	ENST00000483882	RPL29	P47914	159 aa	Known RBP	11.13	□□□□□ -0.63
NR1H3-222	ENST00000483882	HAGH	Q16775	308 aa		11.13	□□□□□ -0.63
NR1H3-222	ENST00000483882	TCF24	Q7RTU0	167 aa		11.13	□□□□□ -0.63
NR1H3-222	ENST00000483882	RNF141	Q8WVD5	230 aa		11.13	□□□□□ -0.63
NR1H3-222	ENST00000483882	TMEM37	Q8WXS4	190 aa		11.13	□□□□□ -0.63
NR1H3-222	ENST00000483882	PFDN2	Q9UHV9	154 aa		11.13	□□□□□ -0.63
NR1H3-222	ENST00000483882	DNAH7	Q8WXX0	4024 aa		11.13	□□□□□ -0.63
NR1H3-222	ENST00000483882	TRAV25	A0A0B4J276	109 aa		11.12	□□□□□ -0.63
NR1H3-222	ENST00000483882	TSPAN4	O14817	238 aa		11.12	□□□□□ -0.63
NR1H3-222	ENST00000483882	MPDU1	O75352	247 aa		11.12	□□□□□ -0.63
NR1H3-222	ENST00000483882	SEC11B	P0C7V7	166 aa		11.12	□□□□□ -0.63
NR1H3-222	ENST00000483882	MORN5	Q5VZ52	161 aa		11.12	□□□□□ -0.63
NR1H3-222	ENST00000483882	OR1B1	Q8NGR6	318 aa		11.12	□□□□□ -0.63
NR1H3-222	ENST00000483882	RSG1	Q9BU20	258 aa		11.12	□□□□□ -0.63
NR1H3-222	ENST00000483882	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.12	□□□□□ -0.63
NR1H3-222	ENST00000483882	SLC39A9	Q9NUM3	307 aa		11.12	□□□□□ -0.63
NR1H3-222	ENST00000483882	PXMP4	Q9Y6I8	212 aa		11.12	□□□□□ -0.63
NR1H3-222	ENST00000483882		A0A1W2PS18	150 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882		H3BRN7	92 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882	HYPM	O75409	117 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882	SULT1A2	P50226	295 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882	RAB31	Q13636	194 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882	GUCA2B	Q16661	112 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882	GCSAML	Q5JQS6	135 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882	C17orf77	Q96MU5	243 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882	UHRF2	Q96PU4	802 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882	SHANK2-AS3	Q9BTD1	123 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882	SCRT1	Q9BWW7	348 aa		11.11	□□□□□ -0.63
NR1H3-222	ENST00000483882	ZNF98	A6NK75	572 aa		11.1	□□□□□ -0.63
NR1H3-222	ENST00000483882	CD7	P09564	240 aa		11.1	□□□□□ -0.63
NR1H3-222	ENST00000483882	OR5G3	P0C626	314 aa		11.1	□□□□□ -0.63
NR1H3-222	ENST00000483882	SPP1	P10451	314 aa		11.1	□□□□□ -0.63
NR1H3-222	ENST00000483882	B2M	P61769	119 aa		11.1	□□□□□ -0.63
NR1H3-222	ENST00000483882	LEMD1	Q68G75	181 aa		11.1	□□□□□ -0.63
NR1H3-222	ENST00000483882	SAT2	Q96F10	170 aa	Predicted RBP	11.1	□□□□□ -0.63
NR1H3-222	ENST00000483882	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.1	□□□□□ -0.63
NR1H3-222	ENST00000483882	RETN	Q9HD89	108 aa		11.1	□□□□□ -0.63
NR1H3-222	ENST00000483882	HIGD1A	Q9Y241	93 aa		11.1	□□□□□ -0.63
NR1H3-222	ENST00000483882	SACS	Q9NZJ4	4579 aa		11.09	□□□□□ -0.63
NR1H3-222	ENST00000483882	IGKV3-7	A0A075B6H7	116 aa		11.09	□□□□□ -0.63
NR1H3-222	ENST00000483882	IFNA5	P01569	189 aa		11.09	□□□□□ -0.63
NR1H3-222	ENST00000483882	CD81	P60033	236 aa		11.09	□□□□□ -0.63
NR1H3-222	ENST00000483882	PXDC1	Q5TGL8	231 aa		11.09	□□□□□ -0.63
NR1H3-222	ENST00000483882	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.09	□□□□□ -0.63
NR1H3-222	ENST00000483882	GBGT1	Q8N5D6	347 aa		11.09	□□□□□ -0.63
NR1H3-222	ENST00000483882	HSD17B11	Q8NBQ5	300 aa		11.09	□□□□□ -0.63
NR1H3-222	ENST00000483882	SPAG8	Q99932	426 aa	Predicted RBP	11.09	□□□□□ -0.63
NR1H3-222	ENST00000483882	TMEM231	Q9H6L2	316 aa		11.09	□□□□□ -0.63
NR1H3-222	ENST00000483882	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	BMI1	P35226	326 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	TFPI2	P48307	235 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	RAB5C	P51148	216 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	BLOC1S1	P78537	153 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	C1orf194	Q5T5A4	169 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	FAM24B	Q8N5W8	94 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	EIF4E3	Q8N5X7	224 aa	Known RBP	11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	SCGB1C1	Q8TD33	95 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	GRAMD2B	Q96HH9	432 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	NARS2	Q96I59	477 aa	Known RBP	11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	FAM110A	Q9BQ89	295 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	MS4A6A	Q9H2W1	248 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	DNAJC4	Q9NNZ3	241 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	PLA2G2E	Q9NZK7	142 aa		11.08	□□□□□ -0.64
NR1H3-222	ENST00000483882	TRAV5	A0A0B4J249	113 aa		11.07	□□□□□ -0.64
NR1H3-222	ENST00000483882	MRPS12	O15235	138 aa	Known RBP	11.07	□□□□□ -0.64
NR1H3-222	ENST00000483882	COX7A2P2	O60397	106 aa		11.07	□□□□□ -0.64
NR1H3-222	ENST00000483882	ATP6V0C	P27449	155 aa		11.07	□□□□□ -0.64
NR1H3-222	ENST00000483882	C10orf113	Q5VZT2	155 aa		11.07	□□□□□ -0.64
NR1H3-222	ENST00000483882	LINC00305	Q7Z4B0	112 aa		11.07	□□□□□ -0.64
NR1H3-222	ENST00000483882	WFDC3	Q8IUB2	231 aa		11.07	□□□□□ -0.64
NR1H3-222	ENST00000483882	DCANP1	Q8TF63	244 aa		11.07	□□□□□ -0.64
NR1H3-222	ENST00000483882	WFDC10A	Q9H1F0	79 aa		11.07	□□□□□ -0.64
NR1H3-222	ENST00000483882	SLC25A22	Q9H936	323 aa		11.07	□□□□□ -0.64
NR1H3-222	ENST00000483882	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.06	□□□□□ -0.64
NR1H3-222	ENST00000483882		K7EQG2	157 aa		11.06	□□□□□ -0.64
NR1H3-222	ENST00000483882	CD5	P06127	495 aa		11.06	□□□□□ -0.64
NR1H3-222	ENST00000483882	RPL11	P62913	178 aa	Known RBP	11.06	□□□□□ -0.64
NR1H3-222	ENST00000483882	ODF3L2	Q3SX64	289 aa		11.06	□□□□□ -0.64
NR1H3-222	ENST00000483882	SPATA31B1P	Q5VZV4	182 aa		11.06	□□□□□ -0.64
NR1H3-222	ENST00000483882	SIGLEC15	Q6ZMC9	328 aa		11.06	□□□□□ -0.64
NR1H3-222	ENST00000483882		Q6ZRG5	221 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms