RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 BDP1A6H8Y1 2624 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 TET1Q8NFU7 2136 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 RIMBP3CA6NJZ7 1639 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 RIMBP3BA6NNM3 1639 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 RIMBP3Q9UFD9 1639 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 TRBV19A0A075B6N1 114 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 OR7C1O76099 320 aaPredicted RBP-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 HLA-EP13747 358 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 CEBPGP53567 150 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 BCL2L15Q5TBC7 163 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 Q86TA4 180 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 OR4K15Q8NH41 348 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 POP5Q969H6 163 aaKnown RBP-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 CHCHD1Q96BP2 118 aaKnown RBP-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 KIFC1Q9BW19 673 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 IMUPQ9GZP8 106 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 OPTCQ9UBM4 332 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 CCDC144AA2RUR9 1427 aa-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 ZFC3H1O60293 1989 aaKnown RBP-0.08□□□□□ -2.42
KDM1A-204ENST00000481879 TNCP24821 2201 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 CEP192Q8TEP8 1941 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 CECR2Q9BXF3 1484 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 KDM6AO15550 1401 aaPredicted RBP-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 NCOA1Q15788 1441 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 C17orf112F2Z3M2 114 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 TMEM256-PLSCR3K7ERE1 68 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 OR10J4P0C629 311 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 DYNLT3P51808 116 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 MYL5Q02045 173 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 OCIAD2Q56VL3 154 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 S100A7AQ86SG5 101 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 OR10AG1Q8NH19 301 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 MUCL1Q96DR8 90 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 ARL5BQ96KC2 179 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 NABP2Q9BQ15 211 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 ARL5AQ9Y689 179 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 MCM3APO60318 1980 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 NSD1Q96L73 2696 aaPredicted RBP-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 RTL1A6NKG5 1358 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 RFX7Q2KHR2 1363 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 ALPK3Q96L96 1907 aa-0.09□□□□□ -2.42
KDM1A-204ENST00000481879 KIF13BQ9NQT8 1826 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 BCL9O00512 1426 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 DMBT1Q9UGM3 2413 aaPredicted RBP-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 TRAV27A0A087WT01 109 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 RAB5CP51148 216 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 UBE2BP63146 152 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 TMEM14EPQ6UXP3 125 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 PATE2Q6UY27 113 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 OR5AS1Q8N127 324 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 OR5D16Q8NGK9 328 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 PPP1R14BQ96C90 147 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 TEX37Q96LM6 180 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 PRAP1Q96NZ9 151 aa-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 NMNAT1Q9HAN9 279 aaPredicted RBP-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 FAM32AQ9Y421 112 aaKnown RBP-0.1□□□□□ -2.43
KDM1A-204ENST00000481879 CITO14578 2027 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 PIK3C2GO75747 1445 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 ARHGEF11O15085 1522 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 KIAA1549Q9HCM3 1950 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 LRP1Q07954 4544 aaKnown RBP-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 NFYBP25208 207 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 MYL6P60660 151 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 GOLT1AQ6ZVE7 132 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 ARPINQ7Z6K5 226 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 HYLS1Q96M11 299 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 ZNF714Q96N38 554 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 CCL19Q99731 98 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 TCEAL2Q9H3H9 227 aaPredicted RBP-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 POPDC3Q9HBV1 291 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 ENY2Q9NPA8 101 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 RNF11Q9Y3C5 154 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 PEAK1Q9H792 1746 aa-0.11□□□□□ -2.43
KDM1A-204ENST00000481879 ASH1LQ9NR48 2969 aaKnown RBP-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 FMN1Q68DA7 1419 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 ZDBF2Q9HCK1 2354 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 C9orf170A2RU37 121 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 FAM159BA6NKW6 160 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 IFNA7P01567 189 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 CRHP06850 196 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 CDKN2CP42773 168 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 TMBIM6P55061 237 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 CCL7P80098 99 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 SPA17Q15506 151 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 TAF1AQ15573 450 aaPredicted RBP-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 Q6ZQY7 126 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 ZHX1-C8orf76Q96EF9 292 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 RMND5BQ96G75 393 aaPredicted RBP-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 BTF3L4Q96K17 158 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 LIMD2Q9BT23 127 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 CACYBPQ9HB71 228 aaKnown RBP-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 SLC22A13Q9Y226 551 aa-0.12□□□□□ -2.43
KDM1A-204ENST00000481879 TMEM114B3SHH9 223 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 HMGB3O15347 200 aaKnown RBP-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 GGCTO75223 188 aaKnown RBP-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 CXCL1P09341 107 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 CCL4P13236 92 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 INSL3P51460 131 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 ARPP19P56211 112 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 FXYD6P3P58550 94 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms