RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ZNF253O75346 499 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 ARL14EPLP0DKL9 152 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 HIST1H1EP10412 219 aaKnown RBP7.77□□□□□ -1.17
USP39-215ENST00000481409 GCHFRP30047 84 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 GALR1P47211 349 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 KRTAP24-1Q3LI83 254 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 OXLD1Q5BKU9 147 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 UQCC3Q6UW78 93 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 C8orf86Q6ZUL3 223 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 PRIMA1Q86XR5 153 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 OR8I2Q8N0Y5 310 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 LYPD1Q8N2G4 141 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 ARL6IP6Q8N6S5 226 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 RAX2Q96IS3 184 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 UHRF2Q96PU4 802 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 ZNF747Q9BV97 191 aa7.77□□□□□ -1.17
USP39-215ENST00000481409 A0A087X0K7 114 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 IGHV3-35A0A0C4DH35 117 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 A0A1W2PRE2 83 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 GP9P14770 177 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 UBE2L3P68036 154 aaKnown RBP7.76□□□□□ -1.17
USP39-215ENST00000481409 C16orf54Q6UWD8 224 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 UNQ9165/PRO28630Q6UXU0 137 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 SSX7Q7RTT5 188 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 OR9G4Q8NGQ1 327 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 FAM210AQ96ND0 272 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 SCRT1Q9BWW7 348 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 SMPXQ9UHP9 88 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 C2CD3Q4AC94 2353 aa7.76□□□□□ -1.17
USP39-215ENST00000481409 MAST4O15021 2626 aa7.75□□□□□ -1.17
USP39-215ENST00000481409 NBEAP1P0C6P0 100 aa7.75□□□□□ -1.17
USP39-215ENST00000481409 SYNJ2BPP57105 145 aa7.75□□□□□ -1.17
USP39-215ENST00000481409 SRSF2Q01130 221 aaKnown RBP7.75□□□□□ -1.17
USP39-215ENST00000481409 PEA15Q15121 130 aa7.75□□□□□ -1.17
USP39-215ENST00000481409 SPATA31B1PQ5VZV4 182 aa7.75□□□□□ -1.17
USP39-215ENST00000481409 SHISA2Q6UWI4 295 aa7.75□□□□□ -1.17
USP39-215ENST00000481409 GLMPQ8WWB7 406 aa7.75□□□□□ -1.17
USP39-215ENST00000481409 FXYD5Q96DB9 178 aa7.75□□□□□ -1.17
USP39-215ENST00000481409 VAX2Q9UIW0 290 aa7.75□□□□□ -1.17
USP39-215ENST00000481409 CUBNO60494 3623 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 TMEM213A2RRL7 107 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 RBFOX3A6NFN3 312 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 C2orf70A6NJV1 201 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 OVOL1O14753 267 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 CHEK1O14757 476 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 MRPS12O15235 138 aaKnown RBP7.74□□□□□ -1.17
USP39-215ENST00000481409 IGLC2P0DOY2 106 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 BCL2P10415 239 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 ATF4P18848 351 aaPredicted RBP7.74□□□□□ -1.17
USP39-215ENST00000481409 CBLN1P23435 193 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 FGF8P55075 233 aaPredicted RBP7.74□□□□□ -1.17
USP39-215ENST00000481409 KRTAP10-3P60369 221 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 PSG9Q00887 426 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 ZNF506Q5JVG8 444 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 MORN5Q5VZ52 161 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 C12orf54Q6X4T0 127 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 SIGLEC15Q6ZMC9 328 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 C18orf65Q6ZTR6 163 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 C11orf44Q8N8P7 122 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 OR2K2Q8NGT1 345 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 DLX4Q92988 240 aaPredicted RBP7.74□□□□□ -1.17
USP39-215ENST00000481409 ZNF503Q96F45 646 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 SLC50A1Q9BRV3 221 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 RHPN1-AS1Q9BWJ2 59 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 GNG13Q9P2W3 67 aa7.74□□□□□ -1.17
USP39-215ENST00000481409 TRBV19A0A075B6N1 114 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 TRAV2A0A0B4J234 112 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 TRAV5A0A0B4J249 113 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 TRAV25A0A0B4J276 109 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 A0A1W2PRX2 142 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 HMGB3O15347 200 aaKnown RBP7.73□□□□□ -1.17
USP39-215ENST00000481409 PDE6DO43924 150 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 PF4P02776 101 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 INSL3P51460 131 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 SLURP1P55000 103 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 CCL20P78556 96 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 MEF2BQ02080 365 aaPredicted RBP7.73□□□□□ -1.17
USP39-215ENST00000481409 DEFB136Q30KP8 78 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 NSUN5P1Q3KNT7 163 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 TM4SF20Q53R12 229 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 IQCF2Q8IXL9 164 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 RPUSD4Q96CM3 377 aaKnown RBP7.73□□□□□ -1.17
USP39-215ENST00000481409 EIF5A2Q9GZV4 153 aaKnown RBP7.73□□□□□ -1.17
USP39-215ENST00000481409 PRELID1Q9Y255 219 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 NF1P21359 2839 aa7.73□□□□□ -1.17
USP39-215ENST00000481409 LOC102723971A0A1B0GUV8 181 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 SERTM2A0A1B0GWG4 89 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 FAM74A7A6NL05 159 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 ZNF785A8K8V0 405 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 F6UZH7 168 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 TMEM250H0YL14 139 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 OR10J4P0C629 311 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 FOLR2P14207 255 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 PAFAH1B2P68402 229 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 LEMD1Q68G75 181 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 COMMD7Q86VX2 200 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 C3orf56Q8N813 242 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 RXFP4Q8TDU9 374 aa7.72□□□□□ -1.17
USP39-215ENST00000481409 PCNPQ8WW12 178 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms