RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 NRARPQ7Z6K4 114 aa10.91□□□□□ -0.66
LIMS3-203ENST00000480744 BPIFCQ8NFQ6 507 aa10.91□□□□□ -0.66
LIMS3-203ENST00000480744 C20orf173Q96LM9 149 aa10.91□□□□□ -0.66
LIMS3-203ENST00000480744 RSG1Q9BU20 258 aa10.91□□□□□ -0.66
LIMS3-203ENST00000480744 A0A0J9YX75 114 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 SMCO3A2RU48 225 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 ZNF98A6NK75 572 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 PRSS46E5RG02 174 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 CCSO14618 274 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 HBE1P02100 147 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 HTN3P15516 51 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 PAX9P55771 341 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 FAM222AQ5U5X8 452 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 ACOT7LQ6ZUV0 252 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 POM121L12Q8N7R1 296 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 OR1B1Q8NGR6 318 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 CLUHP3Q96NS8 147 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 TMEM147Q9BVK8 224 aa10.9□□□□□ -0.66
LIMS3-203ENST00000480744 STRAPQ9Y3F4 350 aaKnown RBP10.9□□□□□ -0.66
LIMS3-203ENST00000480744 HERC2O95714 4834 aa10.89□□□□□ -0.67
LIMS3-203ENST00000480744 LOC102723971A0A1B0GUV8 181 aa10.89□□□□□ -0.67
LIMS3-203ENST00000480744 TMEM182Q6ZP80 229 aaPredicted RBP10.89□□□□□ -0.67
LIMS3-203ENST00000480744 OR4D5Q8NGN0 318 aa10.89□□□□□ -0.67
LIMS3-203ENST00000480744 ENKURQ8TC29 256 aa10.89□□□□□ -0.67
LIMS3-203ENST00000480744 ZNF431Q8TF32 576 aaPredicted RBP10.89□□□□□ -0.67
LIMS3-203ENST00000480744 NIPSNAP3BQ9BS92 247 aa10.89□□□□□ -0.67
LIMS3-203ENST00000480744 TMEM208Q9BTX3 173 aa10.89□□□□□ -0.67
LIMS3-203ENST00000480744 PLA2G2EQ9NZK7 142 aa10.89□□□□□ -0.67
LIMS3-203ENST00000480744 DOK5Q9P104 306 aa10.89□□□□□ -0.67
LIMS3-203ENST00000480744 DKK2Q9UBU2 259 aa10.89□□□□□ -0.67
LIMS3-203ENST00000480744 SLC45A2Q9UMX9 530 aa10.89□□□□□ -0.67
LIMS3-203ENST00000480744 TEX48A0A1B0GUV7 120 aa10.88□□□□□ -0.67
LIMS3-203ENST00000480744 M0R2N4 97 aa10.88□□□□□ -0.67
LIMS3-203ENST00000480744 S100A7P31151 101 aa10.88□□□□□ -0.67
LIMS3-203ENST00000480744 FGL1Q08830 312 aa10.88□□□□□ -0.67
LIMS3-203ENST00000480744 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.88□□□□□ -0.67
LIMS3-203ENST00000480744 UBE2DNLQ8IWF7 75 aa10.88□□□□□ -0.67
LIMS3-203ENST00000480744 C1orf158Q8N1D5 194 aa10.88□□□□□ -0.67
LIMS3-203ENST00000480744 POLR2GP62487 172 aaKnown RBP eCLIP10.87□□□□□ -0.67
LIMS3-203ENST00000480744 RRN3P1Q2M238 152 aa10.87□□□□□ -0.67
LIMS3-203ENST00000480744 IGFL4Q6B9Z1 124 aa10.87□□□□□ -0.67
LIMS3-203ENST00000480744 LINC00336Q6ZUF6 198 aa10.87□□□□□ -0.67
LIMS3-203ENST00000480744 GPR82Q96P67 336 aa10.87□□□□□ -0.67
LIMS3-203ENST00000480744 PSENENQ9NZ42 101 aa10.87□□□□□ -0.67
LIMS3-203ENST00000480744 YTHDF2Q9Y5A9 579 aaKnown RBP10.87□□□□□ -0.67
LIMS3-203ENST00000480744 SSSCA1O60232 199 aa10.86□□□□□ -0.67
LIMS3-203ENST00000480744 IFNA21P01568 189 aa10.86□□□□□ -0.67
LIMS3-203ENST00000480744 IL5P05113 134 aa10.86□□□□□ -0.67
LIMS3-203ENST00000480744 RAP2BP61225 183 aa10.86□□□□□ -0.67
LIMS3-203ENST00000480744 ID3Q02535 119 aa10.86□□□□□ -0.67
LIMS3-203ENST00000480744 IAH1Q2TAA2 248 aaPredicted RBP10.86□□□□□ -0.67
LIMS3-203ENST00000480744 CYP2G1PQ6ZSU1 146 aa10.86□□□□□ -0.67
LIMS3-203ENST00000480744 TMEM144Q7Z5S9 345 aa10.86□□□□□ -0.67
LIMS3-203ENST00000480744 C12orf45Q8N5I9 185 aaPredicted RBP10.86□□□□□ -0.67
LIMS3-203ENST00000480744 RNF182Q8N6D2 247 aa10.86□□□□□ -0.67
LIMS3-203ENST00000480744 ZBTB8BQ8NAP8 495 aaPredicted RBP10.86□□□□□ -0.67
LIMS3-203ENST00000480744 C17orf77Q96MU5 243 aa10.86□□□□□ -0.67
LIMS3-203ENST00000480744 OR5G3P0C626 314 aa10.85□□□□□ -0.67
LIMS3-203ENST00000480744 CNN1P51911 297 aaKnown RBP10.85□□□□□ -0.67
LIMS3-203ENST00000480744 DAD1P61803 113 aa10.85□□□□□ -0.67
LIMS3-203ENST00000480744 RRAS2P62070 204 aaPredicted RBP10.85□□□□□ -0.67
LIMS3-203ENST00000480744 SPINK13Q1W4C9 94 aa10.85□□□□□ -0.67
LIMS3-203ENST00000480744 ZNF738Q8NE65 137 aa10.85□□□□□ -0.67
LIMS3-203ENST00000480744 IGF2BP2-AS1Q96M15 143 aa10.85□□□□□ -0.67
LIMS3-203ENST00000480744 MARVELD1Q9BSK0 173 aa10.85□□□□□ -0.67
LIMS3-203ENST00000480744 KRTAP17-1Q9BYP8 105 aa10.85□□□□□ -0.67
LIMS3-203ENST00000480744 SLC25A39Q9BZJ4 359 aaPredicted RBP10.85□□□□□ -0.67
LIMS3-203ENST00000480744 HIGD1AQ9Y241 93 aa10.85□□□□□ -0.67
LIMS3-203ENST00000480744 RCL1Q9Y2P8 373 aaKnown RBP10.85□□□□□ -0.67
LIMS3-203ENST00000480744 INMT-MINDY4F8WBC2 141 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 H3BRN7 92 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 M0R2Z0 102 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 HYPMO75409 117 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 CCNKO75909 580 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 DUSP14O95147 198 aaKnown RBP10.84□□□□□ -0.67
LIMS3-203ENST00000480744 SCGB1D2O95969 90 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 INSP01308 110 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 LINC00869P0C866 280 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 DEFA1P59665 94 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 DEFA3P59666 94 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 AMTNQ6UX39 209 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 OR11H7Q8NGC8 314 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 FAM210BQ96KR6 192 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 SHANK2-AS3Q9BTD1 123 aa10.84□□□□□ -0.67
LIMS3-203ENST00000480744 NACAE9PAV3 2078 aa10.83□□□□□ -0.68
LIMS3-203ENST00000480744 KIAA1109Q2LD37 5005 aa10.83□□□□□ -0.68
LIMS3-203ENST00000480744 IGLV2-18A0A075B6J9 118 aa10.83□□□□□ -0.68
LIMS3-203ENST00000480744 TRAV8-2A0A0B4J237 113 aa10.83□□□□□ -0.68
LIMS3-203ENST00000480744 A8MTW9 85 aa10.83□□□□□ -0.68
LIMS3-203ENST00000480744 ZNF705GA8MUZ8 300 aaPredicted RBP10.83□□□□□ -0.68
LIMS3-203ENST00000480744 MBPP02686 304 aaPredicted RBP10.83□□□□□ -0.68
LIMS3-203ENST00000480744 METTL15P1P0C7V9 234 aa10.83□□□□□ -0.68
LIMS3-203ENST00000480744 RPL7P18124 248 aaKnown RBP10.83□□□□□ -0.68
LIMS3-203ENST00000480744 OXA1LQ15070 435 aa10.83□□□□□ -0.68
LIMS3-203ENST00000480744 UHRF2Q96PU4 802 aa10.83□□□□□ -0.68
LIMS3-203ENST00000480744 GSKIPQ9P0R6 139 aa10.83□□□□□ -0.68
LIMS3-203ENST00000480744 DNAH17Q9UFH2 4485 aa10.83□□□□□ -0.68
LIMS3-203ENST00000480744 PRSS29PA6NIE9 313 aa10.82□□□□□ -0.68
LIMS3-203ENST00000480744 PRM2P04554 102 aa10.82□□□□□ -0.68
LIMS3-203ENST00000480744 HIST1H1AQ02539 215 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms