RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 FAM135BQ49AJ0 1406 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 CACNA1EQ15878 2313 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 CEP170BQ9Y4F5 1589 aaPredicted RBP0.55□□□□□ -2.32
CALD1-219ENST00000480638 LAMC3Q9Y6N6 1575 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 A0A1B0GV50 99 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 EXOC1LA0A1B0GW35 172 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 hADV38S2A0JD32 116 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 DPRXA6NFQ7 191 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 FAM159BA6NKW6 160 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 OR2J2O76002 312 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 ZNF682O95780 498 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 SERPINA1P01009 418 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 CST2P09228 141 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 SMIM10L2AP0DMW4 78 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 SMIM10L2BP0DMW5 78 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 SRIP30626 198 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 BRS3P32247 399 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 PPP1R2P41236 205 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 SERPINB9P50453 376 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 HIST1H3AP68431 136 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 H3F3AP84243 136 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 TAF1AQ15573 450 aaPredicted RBP0.55□□□□□ -2.32
CALD1-219ENST00000480638 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 PPP1R2P3Q6NXS1 205 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 OR52L1Q8NGH7 329 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 OR13C4Q8NGS5 318 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 OR10X1Q8NGY0 326 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 H1FXQ92522 213 aaKnown RBP0.55□□□□□ -2.32
CALD1-219ENST00000480638 SIGMAR1Q99720 223 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 PRTFDC1Q9NRG1 225 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 TMEM56-RWDD3S4R434 201 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 PLECQ15149 4684 aaKnown RBP0.55□□□□□ -2.32
CALD1-219ENST00000480638 KIF21AQ7Z4S6 1674 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 HSPG2P98160 4391 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 ABCA3Q99758 1704 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 PIK3C2GO75747 1445 aa0.55□□□□□ -2.32
CALD1-219ENST00000480638 TEX14Q8IWB6 1497 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 NEO1Q92859 1461 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 WDR7Q9Y4E6 1490 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 LRP1Q07954 4544 aaKnown RBP0.54□□□□□ -2.32
CALD1-219ENST00000480638 ABCA4P78363 2273 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 EPRSP07814 1512 aaKnown RBP0.54□□□□□ -2.32
CALD1-219ENST00000480638 KDM5DQ9BY66 1539 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 TRRAPQ9Y4A5 3859 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 ADGRB2O60241 1585 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 CASP8AP2Q9UKL3 1982 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 ADCY10Q96PN6 1610 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 IGKV1D-42A0A075B6H8 117 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 PDE6DO43924 150 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 OR7C1O76099 320 aaPredicted RBP0.54□□□□□ -2.32
CALD1-219ENST00000480638 CRYZL1O95825 349 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 SMIM17P0DL12 118 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 CRYGAP11844 174 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 HIST1H2BOP23527 126 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 HIST1H2BBP33778 126 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 HIST1H2BDP58876 126 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 CDC42P60953 191 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 HIST1H2BCP62807 126 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 HIST2H2BEQ16778 126 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.54□□□□□ -2.32
CALD1-219ENST00000480638 RPL22L1Q6P5R6 122 aaKnown RBP0.54□□□□□ -2.32
CALD1-219ENST00000480638 Q6ZQT0 140 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 BPIFA4PQ86YQ2 179 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 OR51A2Q8NGJ7 313 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 TERB2Q8NHR7 220 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 PFN4Q8NHR9 129 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 CT55Q8WUE5 264 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 HIST1H2BHQ93079 126 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 BORCS7Q96B45 105 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 TOMM6Q96B49 74 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 HIST1H2BNQ99877 126 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 HIST1H2BMQ99879 126 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 SLC50A1Q9BRV3 221 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 CCDC94Q9BW85 323 aaPredicted RBP0.54□□□□□ -2.32
CALD1-219ENST00000480638 TRIM4Q9C037 500 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 C20orf27Q9GZN8 174 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 FRAS1Q86XX4 4008 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 DNAH9Q9NYC9 4486 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 ABCC5O15440 1437 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 FGD6Q6ZV73 1430 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 C10orf71Q711Q0 1435 aa0.54□□□□□ -2.32
CALD1-219ENST00000480638 COL1A1P02452 1464 aaPredicted RBP0.54□□□□□ -2.32
CALD1-219ENST00000480638 LRRC37A3O60309 1634 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 CAMSAP1Q5T5Y3 1602 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 PREX2Q70Z35 1606 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 ROBO1Q9Y6N7 1651 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 TRAV9-1A0A075B6T8 112 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 hCG_1818297A0A087WSY0 165 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 A8MT66 165 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 CLDN25C9JDP6 229 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 C1QBP02746 253 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 SERPINE1P05121 402 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 CTSDP07339 412 aaPredicted RBP0.53□□□□□ -2.32
CALD1-219ENST00000480638 HTR1AP08908 422 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 KRTAP2-3P0C7H8 128 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 FKBP2P26885 142 aaKnown RBP0.53□□□□□ -2.32
CALD1-219ENST00000480638 BASP1P80723 227 aaKnown RBP0.53□□□□□ -2.32
CALD1-219ENST00000480638 MRPS25P82663 173 aaKnown RBP0.53□□□□□ -2.32
CALD1-219ENST00000480638 LIN52Q52LA3 116 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 HACD4Q5VWC8 232 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms