RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 C17orf77Q96MU5 243 aa13.53□□□□□ -0.24
PKD1-213ENST00000480227 MRPL27Q9P0M9 148 aaKnown RBP13.53□□□□□ -0.24
PKD1-213ENST00000480227 DYNAPQ8N1N2 210 aa13.52□□□□□ -0.24
PKD1-213ENST00000480227 CIARTQ8N365 385 aaPredicted RBP13.52□□□□□ -0.24
PKD1-213ENST00000480227 GTSF1Q8WW33 167 aa13.52□□□□□ -0.24
PKD1-213ENST00000480227 DAZAP1Q96EP5 407 aaKnown RBP13.52□□□□□ -0.24
PKD1-213ENST00000480227 PGLYRP4Q96LB8 373 aa13.52□□□□□ -0.24
PKD1-213ENST00000480227 RBM14Q96PK6 669 aaKnown RBP13.52□□□□□ -0.24
PKD1-213ENST00000480227 CELSR1Q9NYQ6 3014 aa13.52□□□□□ -0.25
PKD1-213ENST00000480227 ODF3BA8MYP8 253 aa13.52□□□□□ -0.25
PKD1-213ENST00000480227 PRNTQ86SH4 94 aa13.52□□□□□ -0.25
PKD1-213ENST00000480227 NIT1Q86X76 327 aa13.52□□□□□ -0.25
PKD1-213ENST00000480227 Q8N976 141 aa13.52□□□□□ -0.25
PKD1-213ENST00000480227 PRSS22Q9GZN4 317 aa13.52□□□□□ -0.25
PKD1-213ENST00000480227 OTORQ9NRC9 128 aa13.52□□□□□ -0.25
PKD1-213ENST00000480227 PRTN3P24158 256 aa13.51□□□□□ -0.25
PKD1-213ENST00000480227 KIR3DL3Q8N743 410 aa13.51□□□□□ -0.25
PKD1-213ENST00000480227 ASCL2Q99929 193 aa13.51□□□□□ -0.25
PKD1-213ENST00000480227 C20orf144Q9BQM9 153 aa13.51□□□□□ -0.25
PKD1-213ENST00000480227 A8MWL6 223 aa13.51□□□□□ -0.25
PKD1-213ENST00000480227 M0R143 59 aa13.51□□□□□ -0.25
PKD1-213ENST00000480227 CEACAM3P40198 252 aa13.51□□□□□ -0.25
PKD1-213ENST00000480227 LY6DQ14210 128 aa13.51□□□□□ -0.25
PKD1-213ENST00000480227 ALKBH7Q9BT30 221 aaPredicted RBP13.51□□□□□ -0.25
PKD1-213ENST00000480227 TMEM14CQ9P0S9 112 aa13.51□□□□□ -0.25
PKD1-213ENST00000480227 A0A1B0GXF2 115 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 C19orf71A6NCJ1 209 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 M0R1W7 72 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 NDUFA3O95167 84 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 IL4P05112 153 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 C3orf79P0CE67 100 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 ZFP36P26651 326 aaKnown RBP13.5□□□□□ -0.25
PKD1-213ENST00000480227 Q86TA4 180 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 BCL6BQ8N143 479 aaPredicted RBP13.5□□□□□ -0.25
PKD1-213ENST00000480227 NPBQ8NG41 125 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 NEU4Q8WWR8 484 aaPredicted RBP13.5□□□□□ -0.25
PKD1-213ENST00000480227 HBBP68871 147 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 C5orf64Q2M2E5 130 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 RNASEKQ6P5S7 137 aaKnown RBP13.5□□□□□ -0.25
PKD1-213ENST00000480227 ATP5L2Q7Z4Y8 100 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 VMO1Q7Z5L0 202 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 SRSF8Q9BRL6 282 aaKnown RBP13.5□□□□□ -0.25
PKD1-213ENST00000480227 MIEN1Q9BRT3 115 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 SHANK2-AS3Q9BTD1 123 aa13.5□□□□□ -0.25
PKD1-213ENST00000480227 HSBP1O75506 76 aa13.49□□□□□ -0.25
PKD1-213ENST00000480227 IGLV2-11P01706 119 aa13.49□□□□□ -0.25
PKD1-213ENST00000480227 COL8A1P27658 744 aa13.49□□□□□ -0.25
PKD1-213ENST00000480227 NDPQ00604 133 aa13.49□□□□□ -0.25
PKD1-213ENST00000480227 ZNF491Q8N8L2 437 aa13.49□□□□□ -0.25
PKD1-213ENST00000480227 BORCS7Q96B45 105 aa13.49□□□□□ -0.25
PKD1-213ENST00000480227 RNF125Q96EQ8 232 aa13.49□□□□□ -0.25
PKD1-213ENST00000480227 NCBP2LA6PVI3 153 aaKnown RBP13.49□□□□□ -0.25
PKD1-213ENST00000480227 RAB4AP20338 218 aa13.49□□□□□ -0.25
PKD1-213ENST00000480227 FCGR2BP31994 310 aaPredicted RBP13.49□□□□□ -0.25
PKD1-213ENST00000480227 FOXA3P55318 350 aaPredicted RBP13.49□□□□□ -0.25
PKD1-213ENST00000480227 BPIFA4PQ86YQ2 179 aa13.49□□□□□ -0.25
PKD1-213ENST00000480227 TRBV19A0A075B6N1 114 aa13.48□□□□□ -0.25
PKD1-213ENST00000480227 OR4F17Q8NGA8 305 aa13.48□□□□□ -0.25
PKD1-213ENST00000480227 ZNF492Q9P255 531 aa13.48□□□□□ -0.25
PKD1-213ENST00000480227 GNG7O60262 68 aa13.47□□□□□ -0.25
PKD1-213ENST00000480227 OR2J3O76001 311 aa13.47□□□□□ -0.25
PKD1-213ENST00000480227 NUTF2P61970 127 aaKnown RBP13.47□□□□□ -0.25
PKD1-213ENST00000480227 H3BRN7 92 aa13.47□□□□□ -0.25
PKD1-213ENST00000480227 KLF5Q13887 457 aaPredicted RBP13.47□□□□□ -0.25
PKD1-213ENST00000480227 CT83Q5H943 113 aa13.47□□□□□ -0.25
PKD1-213ENST00000480227 ATOH7Q8N100 152 aa13.47□□□□□ -0.25
PKD1-213ENST00000480227 FANCD2OSQ96PS1 177 aa13.47□□□□□ -0.25
PKD1-213ENST00000480227 M0R2Z0 102 aa13.46□□□□□ -0.25
PKD1-213ENST00000480227 SSTP61278 116 aa13.46□□□□□ -0.25
PKD1-213ENST00000480227 LCN12Q6JVE5 192 aa13.46□□□□□ -0.25
PKD1-213ENST00000480227 RBPMS2Q6ZRY4 209 aaKnown RBP13.46□□□□□ -0.25
PKD1-213ENST00000480227 DTX2Q86UW9 622 aa13.46□□□□□ -0.25
PKD1-213ENST00000480227 OR4B1Q8NGF8 309 aa13.46□□□□□ -0.25
PKD1-213ENST00000480227 MAP1AP78559 2803 aaPredicted RBP13.46□□□□□ -0.25
PKD1-213ENST00000480227 M0QZ24 198 aa13.46□□□□□ -0.25
PKD1-213ENST00000480227 IGHV3-23P01764 117 aa13.46□□□□□ -0.25
PKD1-213ENST00000480227 IGLC2P0DOY2 106 aa13.46□□□□□ -0.25
PKD1-213ENST00000480227 SPATA45Q537H7 98 aa13.46□□□□□ -0.25
PKD1-213ENST00000480227 ARPC1AQ92747 370 aa13.46□□□□□ -0.25
PKD1-213ENST00000480227 HLA-DRB1P01911 266 aa13.45□□□□□ -0.26
PKD1-213ENST00000480227 HOXB4P17483 251 aaPredicted RBP13.45□□□□□ -0.26
PKD1-213ENST00000480227 SIGLEC15Q6ZMC9 328 aa13.45□□□□□ -0.26
PKD1-213ENST00000480227 UBTD1Q9HAC8 227 aa13.45□□□□□ -0.26
PKD1-213ENST00000480227 IGLV11-55A0A075B6I3 123 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 FAM181BA6NEQ2 426 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 M0R3E3 92 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 TCAPO15273 167 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 PMCHL1Q16048 86 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 Q56UQ5 140 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 ZNF562Q6V9R5 426 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 ZC2HC1AQ96GY0 325 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 GFRA4Q9GZZ7 299 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 ZNF785A8K8V0 405 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 NPIPB6E9PJ23 425 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 F8W735 103 aaPredicted RBP13.44□□□□□ -0.26
PKD1-213ENST00000480227 URB1-AS1Q96HZ7 61 aa13.44□□□□□ -0.26
PKD1-213ENST00000480227 SH2D7A6NKC9 451 aaPredicted RBP13.43□□□□□ -0.26
PKD1-213ENST00000480227 BATFQ16520 125 aa13.43□□□□□ -0.26
PKD1-213ENST00000480227 EBLN2Q6P2I7 272 aa13.43□□□□□ -0.26
PKD1-213ENST00000480227 ZNF414Q96IQ9 312 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms