RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 MARC2Q969Z3 335 aa3.94□□□□□ -1.78
COMMD3-212ENST00000479958 P2RX4Q99571 388 aa3.94□□□□□ -1.78
COMMD3-212ENST00000479958 MGST2Q99735 147 aa3.94□□□□□ -1.78
COMMD3-212ENST00000479958 FAM103A1Q9BTL3 118 aaKnown RBP3.94□□□□□ -1.78
COMMD3-212ENST00000479958 COMMD5Q9GZQ3 224 aa3.94□□□□□ -1.78
COMMD3-212ENST00000479958 FNDC4Q9H6D8 234 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-212ENST00000479958 ENY2Q9NPA8 101 aa3.94□□□□□ -1.78
COMMD3-212ENST00000479958 ZNF257Q9Y2Q1 563 aa3.94□□□□□ -1.78
COMMD3-212ENST00000479958 ITPR2Q14571 2701 aa3.94□□□□□ -1.78
COMMD3-212ENST00000479958 CR1P17927 2039 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 CSPG4Q6UVK1 2322 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 SVEP1Q4LDE5 3571 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 IGKV1OR2-108A0A075B7D4 117 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 IGHV1-69DA0A0B4J2H0 117 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 MDFIC2A0A1B0GVS7 189 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 HMGB3O15347 200 aaKnown RBP3.93□□□□□ -1.78
COMMD3-212ENST00000479958 NBR2O15453 112 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 IGHV1-69P01742 117 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 MSMBP08118 114 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 LINC00869P0C866 280 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 S100A1P23297 94 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 CEACAM3P40198 252 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 FGF8P55075 233 aaPredicted RBP3.93□□□□□ -1.78
COMMD3-212ENST00000479958 DEFA5Q01523 94 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 ZNF616Q08AN1 781 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 EBI3Q14213 229 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 GAMTQ14353 236 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 ZNF266Q14584 549 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 PLGLAQ15195 96 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 ATP6V1FQ16864 119 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 C5orf64Q2M2E5 130 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 AKR1C8PQ5T2L2 129 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 C9orf66Q5T8R8 295 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 MINOS1Q5TGZ0 78 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 EIF5AL1Q6IS14 154 aaKnown RBP3.93□□□□□ -1.78
COMMD3-212ENST00000479958 ATRAIDQ6UW56 229 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 LCN15Q6UWW0 184 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 HSD17B13Q7Z5P4 300 aaPredicted RBP3.93□□□□□ -1.78
COMMD3-212ENST00000479958 PPP1R27Q86WC6 154 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 NPBQ8NG41 125 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 OR2T10Q8NGZ9 312 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 OR5B3Q8NH48 314 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 LYPD6BQ8NI32 183 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 VSTM2AQ8TAG5 236 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 PINX1Q96BK5 328 aaKnown RBP3.93□□□□□ -1.78
COMMD3-212ENST00000479958 GNPNAT1Q96EK6 184 aaPredicted RBP3.93□□□□□ -1.78
COMMD3-212ENST00000479958 RARRES2Q99969 163 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 HSPB9Q9BQS6 159 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 NPCDR1Q9BY65 106 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 PARD6GQ9BYG4 376 aaPredicted RBP3.93□□□□□ -1.78
COMMD3-212ENST00000479958 PARP11Q9NR21 331 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 FKBP11Q9NYL4 201 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 CELA1Q9UNI1 258 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 MINOS1-NBL1R4GNA1 71 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 CSMD2Q7Z408 3487 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 TEX15Q9BXT5 2789 aa3.93□□□□□ -1.78
COMMD3-212ENST00000479958 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 HECTD1Q9ULT8 2610 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 IGKV1D-37A0A075B6S9 117 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 TRAV40A0A0B4J280 105 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 NCBP2LA6PVI3 153 aaKnown RBP3.92□□□□□ -1.78
COMMD3-212ENST00000479958 OOSP1A8MZH6 123 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 NDUFA3O95167 84 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 CNIH1O95406 144 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 FBP1P09467 338 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 SLC25A16P16260 332 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 ADCYAP1P18509 176 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 OR10J1P30954 320 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 FCGR2BP31994 310 aaPredicted RBP3.92□□□□□ -1.78
COMMD3-212ENST00000479958 SNCAP37840 140 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 RAB11AP62491 216 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 FXYD3Q14802 87 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 KRTAP13-3Q3SY46 172 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 TMEM41BQ5BJD5 291 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 SPATA31B1PQ5VZV4 182 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 RPP25LQ8N5L8 163 aaKnown RBP3.92□□□□□ -1.78
COMMD3-212ENST00000479958 EIF4E3Q8N5X7 224 aaKnown RBP3.92□□□□□ -1.78
COMMD3-212ENST00000479958 Q8N9W7 124 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 WFDC11Q8NEX6 87 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 SFT2D1Q8WV19 159 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 SRSF12Q8WXF0 261 aaKnown RBP3.92□□□□□ -1.78
COMMD3-212ENST00000479958 C22orf15Q8WYQ4 148 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 C11orf52Q96A22 123 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 MALSU1Q96EH3 234 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 RNF5Q99942 180 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 PSMG3Q9BT73 122 aaPredicted RBP3.92□□□□□ -1.78
COMMD3-212ENST00000479958 GGTLC1Q9BX51 225 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 SLC25A22Q9H936 323 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 TREM1Q9NP99 234 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 TBL2Q9Y4P3 447 aaKnown RBP3.92□□□□□ -1.78
COMMD3-212ENST00000479958 S4R3C0 116 aa3.92□□□□□ -1.78
COMMD3-212ENST00000479958 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.92□□□□□ -1.781e-7■■■■□ 21.5
COMMD3-212ENST00000479958 ITPR3Q14573 2671 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 CSMD1Q96PZ7 3565 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 IGHV7-81A0A0B4J1V7 117 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 RAB19A4D1S5 217 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 B4DSR2 109 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 UMAD1C9J7I0 102 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 INS-IGF2F8WCM5 200 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 SOX15O60248 233 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms