RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SPINK13Q1W4C9 94 aa12.41□□□□□ -0.42
ECHDC1-216ENST00000479525 LCE2DQ5TA82 110 aaPredicted RBP12.41□□□□□ -0.42
ECHDC1-216ENST00000479525 RNF126Q9BV68 326 aa12.41□□□□□ -0.42
ECHDC1-216ENST00000479525 GSKIPQ9P0R6 139 aa12.41□□□□□ -0.42
ECHDC1-216ENST00000479525 PIGBOS1A0A0B4J2F0 54 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 LOC102723971A0A1B0GUV8 181 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 H3BRN7 92 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 OR5G3P0C626 314 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 LINC00869P0C866 280 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 SLC38A11Q08AI6 406 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 ARL16Q0P5N6 197 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 AMTNQ6UX39 209 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 TMEM144Q7Z5S9 345 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 SLC25A39Q9BZJ4 359 aaPredicted RBP12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 DKK2Q9UBU2 259 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 FAT2Q9NYQ8 4349 aa12.4□□□□□ -0.42
ECHDC1-216ENST00000479525 ZNF705GA8MUZ8 300 aaPredicted RBP12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 AMBPP02760 352 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 SPART-AS1P0CW21 52 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 IL7P13232 177 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 CNN1P51911 297 aaKnown RBP12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 IAH1Q2TAA2 248 aaPredicted RBP12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 BAP18Q8IXM2 172 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 DEDD2Q8WXF8 326 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 NEU1Q99519 415 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 HIGD1AQ9Y241 93 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 RCL1Q9Y2P8 373 aaKnown RBP12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 GOLT1BQ9Y3E0 138 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 YTHDF2Q9Y5A9 579 aaKnown RBP12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 RFNGQ9Y644 331 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 DNAH17Q9UFH2 4485 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 NACAE9PAV3 2078 aa12.39□□□□□ -0.43
ECHDC1-216ENST00000479525 TRAV12-2A0A075B6T6 113 aa12.38□□□□□ -0.43
ECHDC1-216ENST00000479525 NAP1L6A6NFF2 107 aa12.38□□□□□ -0.43
ECHDC1-216ENST00000479525 IFNA21P01568 189 aa12.38□□□□□ -0.43
ECHDC1-216ENST00000479525 ZBTB8BQ8NAP8 495 aaPredicted RBP12.38□□□□□ -0.43
ECHDC1-216ENST00000479525 ZNF738Q8NE65 137 aa12.38□□□□□ -0.43
ECHDC1-216ENST00000479525 OR11H7Q8NGC8 314 aa12.38□□□□□ -0.43
ECHDC1-216ENST00000479525 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
ECHDC1-216ENST00000479525 NDUFAF3Q9BU61 184 aa12.38□□□□□ -0.43
ECHDC1-216ENST00000479525 ARL6Q9H0F7 186 aa12.38□□□□□ -0.43
ECHDC1-216ENST00000479525 IGLV2-18A0A075B6J9 118 aa12.37□□□□□ -0.43
ECHDC1-216ENST00000479525 H3BTX0 84 aa12.37□□□□□ -0.43
ECHDC1-216ENST00000479525 HBE1P02100 147 aa12.37□□□□□ -0.43
ECHDC1-216ENST00000479525 MEOX2P50222 304 aa12.37□□□□□ -0.43
ECHDC1-216ENST00000479525 RAP2BP61225 183 aa12.37□□□□□ -0.43
ECHDC1-216ENST00000479525 PATE2Q6UY27 113 aa12.37□□□□□ -0.43
ECHDC1-216ENST00000479525 SMIM8Q96KF7 97 aa12.37□□□□□ -0.43
ECHDC1-216ENST00000479525 NIPSNAP3BQ9BS92 247 aa12.37□□□□□ -0.43
ECHDC1-216ENST00000479525 SHANK2-AS3Q9BTD1 123 aa12.37□□□□□ -0.43
ECHDC1-216ENST00000479525 TRAV6A0A075B6T7 132 aa12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 PLA2G10O15496 165 aa12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 CRXO43186 299 aaPredicted RBP12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 HYPMO75409 117 aa12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 CFDP00746 253 aaPredicted RBP12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 FCN2Q15485 313 aa12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 RRN3P1Q2M238 152 aa12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 TMEM14EPQ6UXP3 125 aa12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 SEC22CQ9BRL7 303 aa12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 C20orf85Q9H1P6 137 aa12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 SLC45A2Q9UMX9 530 aa12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 HERC2O95714 4834 aa12.36□□□□□ -0.43
ECHDC1-216ENST00000479525 SMIM9A6NGZ8 99 aa12.35□□□□□ -0.43
ECHDC1-216ENST00000479525 ZNF701M0R085 212 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-216ENST00000479525 MBPP02686 304 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-216ENST00000479525 HIST1H1AQ02539 215 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-216ENST00000479525 CLUHP3Q96NS8 147 aa12.35□□□□□ -0.43
ECHDC1-216ENST00000479525 PARD6GQ9BYG4 376 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-216ENST00000479525 KRTAP17-1Q9BYP8 105 aa12.35□□□□□ -0.43
ECHDC1-216ENST00000479525 LSM5Q9Y4Y9 91 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-216ENST00000479525 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
ECHDC1-216ENST00000479525 FAM25EA8MYX2 175 aa12.34□□□□□ -0.43
ECHDC1-216ENST00000479525 AZU1P20160 251 aa12.34□□□□□ -0.43
ECHDC1-216ENST00000479525 DLK1P80370 383 aa12.34□□□□□ -0.43
ECHDC1-216ENST00000479525 MORN5Q5VZ52 161 aa12.34□□□□□ -0.43
ECHDC1-216ENST00000479525 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
ECHDC1-216ENST00000479525 IGF2BP2-AS1Q96M15 143 aa12.34□□□□□ -0.43
ECHDC1-216ENST00000479525 C7orf66A4D0T2 115 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 CENPXA8MT69 81 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 A8MTW9 85 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 DAD1P61803 113 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 RHOBP62745 196 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 SPATA31B1PQ5VZV4 182 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 UBE2DNLQ8IWF7 75 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 OR10P1Q8NGE3 313 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 ARV1Q9H2C2 271 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 NPVFQ9HCQ7 196 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 MGAT4CQ9UBM8 478 aa12.33□□□□□ -0.44
ECHDC1-216ENST00000479525 AGPAT2O15120 278 aa12.32□□□□□ -0.44
ECHDC1-216ENST00000479525 P0DMU3 169 aa12.32□□□□□ -0.44
ECHDC1-216ENST00000479525 FAM231AP0DMU4 169 aa12.32□□□□□ -0.44
ECHDC1-216ENST00000479525 FAM231CP0DMU5 169 aa12.32□□□□□ -0.44
ECHDC1-216ENST00000479525 HTN1P15515 57 aa12.32□□□□□ -0.44
ECHDC1-216ENST00000479525 KIR3DS1Q14943 382 aa12.32□□□□□ -0.44
ECHDC1-216ENST00000479525 TMEM88Q6PEY1 159 aa12.32□□□□□ -0.44
ECHDC1-216ENST00000479525 LRRC20Q8TCA0 184 aa12.32□□□□□ -0.44
ECHDC1-216ENST00000479525 MITD1Q8WV92 249 aa12.32□□□□□ -0.44
ECHDC1-216ENST00000479525 GPR82Q96P67 336 aa12.32□□□□□ -0.44
ECHDC1-216ENST00000479525 LYRM1O43325 122 aa12.31□□□□□ -0.44
ECHDC1-216ENST00000479525 DUSP14O95147 198 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms