RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CBLN1P23435 193 aa9.9□□□□□ -0.82
CHD3-210ENST00000479080 NPPCP23582 126 aa9.9□□□□□ -0.82
CHD3-210ENST00000479080 RHOBP62745 196 aa9.9□□□□□ -0.82
CHD3-210ENST00000479080 FAM90A2PQ658T7 463 aa9.9□□□□□ -0.82
CHD3-210ENST00000479080 EIF5AL1Q6IS14 154 aaKnown RBP9.9□□□□□ -0.82
CHD3-210ENST00000479080 MBD3L1Q8WWY6 194 aa9.9□□□□□ -0.82
CHD3-210ENST00000479080 RNF2Q99496 336 aa9.9□□□□□ -0.82
CHD3-210ENST00000479080 RHPN1-AS1Q9BWJ2 59 aa9.9□□□□□ -0.82
CHD3-210ENST00000479080 WNK1Q9H4A3 2382 aa9.89□□□□□ -0.83
CHD3-210ENST00000479080 SNRPCP09234 159 aaKnown RBP9.89□□□□□ -0.83
CHD3-210ENST00000479080 FGF8P55075 233 aaPredicted RBP9.89□□□□□ -0.83
CHD3-210ENST00000479080 CCL20P78556 96 aa9.89□□□□□ -0.83
CHD3-210ENST00000479080 LCN15Q6UWW0 184 aa9.89□□□□□ -0.83
CHD3-210ENST00000479080 DPPA3Q6W0C5 159 aa9.89□□□□□ -0.83
CHD3-210ENST00000479080 FXYD5Q96DB9 178 aa9.89□□□□□ -0.83
CHD3-210ENST00000479080 ACTR3CQ9C0K3 210 aaPredicted RBP9.89□□□□□ -0.83
CHD3-210ENST00000479080 UBQLN2Q9UHD9 624 aa9.89□□□□□ -0.83
CHD3-210ENST00000479080 MAP1LC3B2A6NCE7 125 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 H3BQ15 152 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 IFNA7P01567 189 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 ARL14EPLP0DKL9 152 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 IGLC2P0DOY2 106 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 RAB5CP51148 216 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 WFDC9Q8NEX5 89 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 RNF141Q8WVD5 230 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 ELOVL1Q9BW60 279 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 MAP1LC3BQ9GZQ8 125 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 TMPRSS5Q9H3S3 457 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 SIGLEC8Q9NYZ4 499 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 DNAH3Q8TD57 4116 aa9.88□□□□□ -0.83
CHD3-210ENST00000479080 A0A1B0GV50 99 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 A0A1W2PPV4 95 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 IZUMO1RA6ND01 250 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 ZNF705EA8MWA4 302 aaPredicted RBP9.87□□□□□ -0.83
CHD3-210ENST00000479080 H3BTX0 84 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 C1orf194Q5T5A4 169 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 ZNF767PQ75MW2 155 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 LYPD6BQ8NI32 183 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 SUN5Q8TC36 379 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 ZNF586Q9NXT0 402 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 TMEM14CQ9P0S9 112 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 PEMTQ9UBM1 199 aa9.87□□□□□ -0.83
CHD3-210ENST00000479080 TRAV1-1A0A0B4J248 108 aa9.86□□□□□ -0.83
CHD3-210ENST00000479080 M0QZ24 198 aa9.86□□□□□ -0.83
CHD3-210ENST00000479080 SLC17A3O00476 420 aa9.86□□□□□ -0.83
CHD3-210ENST00000479080 NDUFB4O95168 129 aa9.86□□□□□ -0.83
CHD3-210ENST00000479080 OR10J4P0C629 311 aa9.86□□□□□ -0.83
CHD3-210ENST00000479080 GCHFRP30047 84 aa9.86□□□□□ -0.83
CHD3-210ENST00000479080 DEFB114Q30KQ6 69 aa9.86□□□□□ -0.83
CHD3-210ENST00000479080 TCF24Q7RTU0 167 aa9.86□□□□□ -0.83
CHD3-210ENST00000479080 MARC2Q969Z3 335 aa9.86□□□□□ -0.83
CHD3-210ENST00000479080 SAT2Q96F10 170 aaPredicted RBP9.86□□□□□ -0.83
CHD3-210ENST00000479080 OR51M1Q9H341 326 aa9.86□□□□□ -0.83
CHD3-210ENST00000479080 A0A087X0K7 114 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 SOCS3O14543 225 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 OR7C2O60412 319 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 IGLV1-51P01701 117 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 CD300EQ496F6 205 aaPredicted RBP9.85□□□□□ -0.83
CHD3-210ENST00000479080 KHDC3LQ587J8 217 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 SIGLEC15Q6ZMC9 328 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 TMEM61Q8N0U2 210 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 OR8I2Q8N0Y5 310 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 SFT2D1Q8WV19 159 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 PAXXQ9BUH6 204 aa9.85□□□□□ -0.83
CHD3-210ENST00000479080 TRAV8-2A0A0B4J237 113 aa9.84□□□□□ -0.83
CHD3-210ENST00000479080 A0A1W2PS18 150 aa9.84□□□□□ -0.83
CHD3-210ENST00000479080 TEX46H3BTG2 121 aa9.84□□□□□ -0.83
CHD3-210ENST00000479080 SAP30O75446 220 aa9.84□□□□□ -0.83
CHD3-210ENST00000479080 HIST1H1EP10412 219 aaKnown RBP9.84□□□□□ -0.83
CHD3-210ENST00000479080 PQLC2Q6ZP29 291 aa9.84□□□□□ -0.83
CHD3-210ENST00000479080 BPIFA4PQ86YQ2 179 aa9.84□□□□□ -0.83
CHD3-210ENST00000479080 FAM24BQ8N5W8 94 aa9.84□□□□□ -0.83
CHD3-210ENST00000479080 TRBV19A0A075B6N1 114 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 CXorf1O96002 111 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 IGLL1P15814 213 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 RPL7P18124 248 aaKnown RBP9.83□□□□□ -0.84
CHD3-210ENST00000479080 HLA-DMBP28068 263 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 TAS2R45P59539 299 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 UBE2L3P68036 154 aaKnown RBP9.83□□□□□ -0.84
CHD3-210ENST00000479080 BLOC1S1P78537 153 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 CLLU1Q5K131 121 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 IGFL4Q6B9Z1 124 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 DCANP1Q8TF63 244 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 HRH4Q9H3N8 390 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 YTHDF2Q9Y5A9 579 aaKnown RBP9.83□□□□□ -0.84
CHD3-210ENST00000479080 NBEAL1Q6ZS30 2694 aa9.83□□□□□ -0.84
CHD3-210ENST00000479080 IGKV3-7A0A075B6H7 116 aa9.82□□□□□ -0.84
CHD3-210ENST00000479080 ZNF785A8K8V0 405 aa9.82□□□□□ -0.84
CHD3-210ENST00000479080 WIPF1O43516 503 aa9.82□□□□□ -0.84
CHD3-210ENST00000479080 PRB4P10163 310 aaPredicted RBP9.82□□□□□ -0.84
CHD3-210ENST00000479080 GBGT1Q8N5D6 347 aa9.82□□□□□ -0.84
CHD3-210ENST00000479080 DYNLRB2Q8TF09 96 aa9.82□□□□□ -0.84
CHD3-210ENST00000479080 GRAMD2BQ96HH9 432 aa9.82□□□□□ -0.84
CHD3-210ENST00000479080 NARS2Q96I59 477 aaKnown RBP9.82□□□□□ -0.84
CHD3-210ENST00000479080 C20orf173Q96LM9 149 aa9.82□□□□□ -0.84
CHD3-210ENST00000479080 GPR82Q96P67 336 aa9.82□□□□□ -0.84
CHD3-210ENST00000479080 MS4A6AQ9H2W1 248 aa9.82□□□□□ -0.84
CHD3-210ENST00000479080 TMEM231Q9H6L2 316 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms