RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 Q6ZN92 141 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 ALKBH7Q9BT30 221 aaPredicted RBP8.56□□□□□ -1.04
VPS52-217ENST00000478934 IGHV3-23P01764 117 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 PRNTQ86SH4 94 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 DYNAPQ8N1N2 210 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 C8orf46Q8TAG6 207 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 SLC25A39Q9BZJ4 359 aaPredicted RBP8.55□□□□□ -1.04
VPS52-217ENST00000478934 TCRAP04437 139 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 HIST1H1EP10412 219 aaKnown RBP8.55□□□□□ -1.04
VPS52-217ENST00000478934 CA7P43166 264 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 HES1Q14469 280 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 GOLT1AQ6ZVE7 132 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 SSX8Q7RTT4 187 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 OR4B1Q8NGF8 309 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 C22orf15Q8WYQ4 148 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 GPR82Q96P67 336 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 HIGD1AQ9Y241 93 aa8.55□□□□□ -1.04
VPS52-217ENST00000478934 FAM181BA6NEQ2 426 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 K7EIM0 57 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 FAM231DQ6ZW35 169 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 STPG4Q8N801 248 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 OR8B3Q8NGG8 313 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 OR8B2Q96RD0 313 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 MLST8Q9BVC4 326 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 A0A1W2PPR1 153 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 P01737 135 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 CSN3P07498 182 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 IGLC2P0DOY2 106 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 HINT1P49773 126 aaPredicted RBP8.54□□□□□ -1.04
VPS52-217ENST00000478934 TNFRSF14Q92956 283 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 RASL11BQ9BPW5 248 aa8.54□□□□□ -1.04
VPS52-217ENST00000478934 RPP21Q9H633 154 aaKnown RBP8.54□□□□□ -1.04
VPS52-217ENST00000478934 IGHV3OR16-8A0A075B7F1 116 aa8.53□□□□□ -1.04
VPS52-217ENST00000478934 ZNF785A8K8V0 405 aa8.53□□□□□ -1.04
VPS52-217ENST00000478934 LIPFP07098 398 aa8.53□□□□□ -1.04
VPS52-217ENST00000478934 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
VPS52-217ENST00000478934 KLF12Q9Y4X4 402 aa8.53□□□□□ -1.04
VPS52-217ENST00000478934 HIVEP3Q5T1R4 2406 aa8.53□□□□□ -1.04
VPS52-217ENST00000478934 HTR1DP28221 377 aa8.53□□□□□ -1.04
VPS52-217ENST00000478934 PMCHL2Q9BQD1 86 aa8.53□□□□□ -1.04
VPS52-217ENST00000478934 MUC21A0A0G2JKD1 596 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 MUC21A0A140T8X8 626 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 M0R3E3 92 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 DLEU1O43261 78 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 LTAP01374 205 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 IGLV2-11P01706 119 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 HNRNPA3P51991 378 aaKnown RBP8.52□□□□□ -1.04
VPS52-217ENST00000478934 HBBP68871 147 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 NDPQ00604 133 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 MUC21Q5SSG8 566 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 ERASQ7Z444 233 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 C5orf17Q8NAS9 161 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 LY6G5BQ8NDX9 201 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 STXBP6Q8NFX7 210 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 WIPF2Q8TF74 440 aaPredicted RBP8.52□□□□□ -1.04
VPS52-217ENST00000478934 CFHR4Q92496 578 aa8.52□□□□□ -1.04
VPS52-217ENST00000478934 DAZAP1Q96EP5 407 aaKnown RBP8.52□□□□□ -1.04
VPS52-217ENST00000478934 IGHV3-35A0A0C4DH35 117 aa8.52□□□□□ -1.05
VPS52-217ENST00000478934 A0A1B0GXF2 115 aa8.52□□□□□ -1.05
VPS52-217ENST00000478934 TOMM40O96008 361 aa8.52□□□□□ -1.05
VPS52-217ENST00000478934 COL8A1P27658 744 aa8.52□□□□□ -1.05
VPS52-217ENST00000478934 COX19Q49B96 90 aa8.52□□□□□ -1.05
VPS52-217ENST00000478934 DPM3Q9P2X0 92 aa8.52□□□□□ -1.05
VPS52-217ENST00000478934 C2orf70A6NJV1 201 aa8.51□□□□□ -1.05
VPS52-217ENST00000478934 NBR2O15453 112 aa8.51□□□□□ -1.05
VPS52-217ENST00000478934 IL4P05112 153 aa8.51□□□□□ -1.05
VPS52-217ENST00000478934 IGLL1P15814 213 aa8.51□□□□□ -1.05
VPS52-217ENST00000478934 ZFP36P26651 326 aaKnown RBP8.51□□□□□ -1.05
VPS52-217ENST00000478934 RBM14Q96PK6 669 aaKnown RBP8.51□□□□□ -1.05
VPS52-217ENST00000478934 MRPL27Q9P0M9 148 aaKnown RBP8.51□□□□□ -1.05
VPS52-217ENST00000478934 GOLT1BQ9Y3E0 138 aa8.51□□□□□ -1.05
VPS52-217ENST00000478934 C19orf71A6NCJ1 209 aa8.51□□□□□ -1.05
VPS52-217ENST00000478934 NCBP2LA6PVI3 153 aaKnown RBP8.51□□□□□ -1.05
VPS52-217ENST00000478934 M0QZK8 103 aa8.51□□□□□ -1.05
VPS52-217ENST00000478934 FCGR2BP31994 310 aaPredicted RBP8.51□□□□□ -1.05
VPS52-217ENST00000478934 PLP1P60201 277 aa8.51□□□□□ -1.05
VPS52-217ENST00000478934 PRSS22Q9GZN4 317 aa8.51□□□□□ -1.05
VPS52-217ENST00000478934 UQCR10Q9UDW1 63 aa8.51□□□□□ -1.05
VPS52-217ENST00000478934 LOC105371242A0A075B767 164 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 TMSB15BA0A087X1C1 80 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 hDV102S1A0JD36 115 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 BTF3P20290 206 aaKnown RBP8.5□□□□□ -1.05
VPS52-217ENST00000478934 IGFL4Q6B9Z1 124 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 Q86TA4 180 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 ZNF491Q8N8L2 437 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 IGHV1-24A0A0C4DH33 117 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 A8MWL6 223 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 NDUFB8O95169 186 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 DMRTA1Q5VZB9 504 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 ZC2HC1AQ96GY0 325 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 FMC1Q96HJ9 113 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 RAB1BQ9H0U4 201 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 LAMTOR2Q9Y2Q5 125 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 CHEK1O14757 476 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 ARMS2P0C7Q2 107 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 FAM120AOSQ5T036 256 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 UNQ5815/PRO19632Q6UWF5 114 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 FANCD2OSQ96PS1 177 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 279.7 ms