RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.37□□□□□ -0.91
VCL-205ENST00000478896 TOMM5Q8N4H5 51 aa9.37□□□□□ -0.91
VCL-205ENST00000478896 OR11H7Q8NGC8 314 aa9.37□□□□□ -0.91
VCL-205ENST00000478896 SMCO3A2RU48 225 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 LYRM9A8MSI8 78 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 H3BP45 60 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 SYNGR2O43760 224 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 DEFB130BP0DP73 79 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 DEFB130AP0DP74 79 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 FAM3BP58499 235 aaPredicted RBP9.36□□□□□ -0.91
VCL-205ENST00000478896 B2MP61769 119 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 IGFL4Q6B9Z1 124 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 ACOT7LQ6ZUV0 252 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 BAP18Q8IXM2 172 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 RNF182Q8N6D2 247 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 ZNF738Q8NE65 137 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 OR4D5Q8NGN0 318 aa9.36□□□□□ -0.91
VCL-205ENST00000478896 A8MTW9 85 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 PRSS46E5RG02 174 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 F5H768 121 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 NUDT3O95989 172 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 PRM2P04554 102 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 HOXB5P09067 269 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 TNFSF8P32971 234 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 TMBIM6P55061 237 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 RAP2BP61225 183 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 LRTM2Q8N967 370 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 BCL7BQ9BQE9 202 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
VCL-205ENST00000478896 STRAPQ9Y3F4 350 aaKnown RBP9.35□□□□□ -0.91
VCL-205ENST00000478896 TRAV12-2A0A075B6T6 113 aa9.34□□□□□ -0.91
VCL-205ENST00000478896 H3BRN7 92 aa9.34□□□□□ -0.91
VCL-205ENST00000478896 BOLA2-SMG1P6H3BVE0 249 aa9.34□□□□□ -0.91
VCL-205ENST00000478896 CRXO43186 299 aaPredicted RBP9.34□□□□□ -0.91
VCL-205ENST00000478896 SFT2D2O95562 160 aa9.34□□□□□ -0.91
VCL-205ENST00000478896 IL5P05113 134 aa9.34□□□□□ -0.91
VCL-205ENST00000478896 RHOBP62745 196 aa9.34□□□□□ -0.91
VCL-205ENST00000478896 HIST1H1AQ02539 215 aaPredicted RBP9.34□□□□□ -0.91
VCL-205ENST00000478896 PPP1R1AQ13522 171 aa9.34□□□□□ -0.91
VCL-205ENST00000478896 PYDC2Q56P42 97 aa9.34□□□□□ -0.91
VCL-205ENST00000478896 TMEM182Q6ZP80 229 aaPredicted RBP9.34□□□□□ -0.91
VCL-205ENST00000478896 MCFD2Q8NI22 146 aa9.34□□□□□ -0.91
VCL-205ENST00000478896 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
VCL-205ENST00000478896 SLIRPQ9GZT3 109 aaKnown RBP9.34□□□□□ -0.91
VCL-205ENST00000478896 HIGD1AQ9Y241 93 aa9.34□□□□□ -0.91
VCL-205ENST00000478896 TRAV8-2A0A0B4J237 113 aa9.33□□□□□ -0.92
VCL-205ENST00000478896 C16orf90A8MZG2 172 aa9.33□□□□□ -0.92
VCL-205ENST00000478896 OR5G3P0C626 314 aa9.33□□□□□ -0.92
VCL-205ENST00000478896 HTN1P15515 57 aa9.33□□□□□ -0.92
VCL-205ENST00000478896 RPL7P18124 248 aaKnown RBP9.33□□□□□ -0.92
VCL-205ENST00000478896 CYP2G1PQ6ZSU1 146 aa9.33□□□□□ -0.92
VCL-205ENST00000478896 TMEM144Q7Z5S9 345 aa9.33□□□□□ -0.92
VCL-205ENST00000478896 LRRC20Q8TCA0 184 aa9.33□□□□□ -0.92
VCL-205ENST00000478896 TRIM63Q969Q1 353 aa9.33□□□□□ -0.92
VCL-205ENST00000478896 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
VCL-205ENST00000478896 LINC01587Q99440 93 aa9.33□□□□□ -0.92
VCL-205ENST00000478896 SLC25A21Q9BQT8 299 aaPredicted RBP9.33□□□□□ -0.92
VCL-205ENST00000478896 ATP5G1P05496 136 aa9.32□□□□□ -0.92
VCL-205ENST00000478896 LINC00869P0C866 280 aa9.32□□□□□ -0.92
VCL-205ENST00000478896 TSPOP30536 169 aa9.32□□□□□ -0.92
VCL-205ENST00000478896 ATP5G3P48201 142 aa9.32□□□□□ -0.92
VCL-205ENST00000478896 CCL18P55774 89 aa9.32□□□□□ -0.92
VCL-205ENST00000478896 FCN2Q15485 313 aa9.32□□□□□ -0.92
VCL-205ENST00000478896 SOSTQ9BQB4 213 aa9.32□□□□□ -0.92
VCL-205ENST00000478896 SHANK2-AS3Q9BTD1 123 aa9.32□□□□□ -0.92
VCL-205ENST00000478896 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 NBDYA0A0U1RRE5 68 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 H3BMQ9 156 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 HYPMO75409 117 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 AZU1P20160 251 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 TNP2Q05952 138 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 CLINT1Q14677 625 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 S100A7AQ86SG5 101 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 TMEM256Q8N2U0 113 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 C6orf223Q8N319 242 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 OR8A1Q8NGG7 326 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 C16orf74Q96GX8 76 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 UHRF2Q96PU4 802 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 PSENENQ9NZ42 101 aa9.31□□□□□ -0.92
VCL-205ENST00000478896 PLAC8L1A1L4L8 177 aa9.3□□□□□ -0.92
VCL-205ENST00000478896 SSSCA1O60232 199 aa9.3□□□□□ -0.92
VCL-205ENST00000478896 PRB4P10163 310 aaPredicted RBP9.3□□□□□ -0.92
VCL-205ENST00000478896 CXCL3P19876 107 aa9.3□□□□□ -0.92
VCL-205ENST00000478896 S100A5P33763 92 aa9.3□□□□□ -0.92
VCL-205ENST00000478896 TAS2R60P59551 318 aa9.3□□□□□ -0.92
VCL-205ENST00000478896 RRAS2P62070 204 aaPredicted RBP9.3□□□□□ -0.92
VCL-205ENST00000478896 POLR2GP62487 172 aaKnown RBP eCLIP9.3□□□□□ -0.92
VCL-205ENST00000478896 ZNRF2Q8NHG8 242 aa9.3□□□□□ -0.92
VCL-205ENST00000478896 DEDD2Q8WXF8 326 aa9.3□□□□□ -0.92
VCL-205ENST00000478896 TIMM8BQ9Y5J9 83 aaPredicted RBP9.3□□□□□ -0.92
VCL-205ENST00000478896 DYNC1H1Q14204 4646 aaKnown RBP9.3□□□□□ -0.92
VCL-205ENST00000478896 DNAH11Q96DT5 4516 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 A0A087X0K7 114 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 CBY3A6NI87 242 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 ADAP1O75689 374 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 ANXA7P20073 488 aaKnown RBP9.29□□□□□ -0.92
VCL-205ENST00000478896 CDKN1BP46527 198 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 SELENOTP62341 195 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 PSG3Q16557 428 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 ARL6Q9H0F7 186 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms