RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ORM2P19652 201 aa11.78□□□□□ -0.52
TRIM13-208ENST00000478111 CNN1P51911 297 aaKnown RBP11.78□□□□□ -0.52
TRIM13-208ENST00000478111 DAD1P61803 113 aa11.78□□□□□ -0.52
TRIM13-208ENST00000478111 BPIFCQ8NFQ6 507 aa11.78□□□□□ -0.52
TRIM13-208ENST00000478111 OR11H7Q8NGC8 314 aa11.78□□□□□ -0.52
TRIM13-208ENST00000478111 OR1B1Q8NGR6 318 aa11.78□□□□□ -0.52
TRIM13-208ENST00000478111 CIB3Q96Q77 187 aaPredicted RBP11.78□□□□□ -0.52
TRIM13-208ENST00000478111 DNAH5Q8TE73 4624 aa11.78□□□□□ -0.52
TRIM13-208ENST00000478111 M0R2Z0 102 aa11.77□□□□□ -0.53
TRIM13-208ENST00000478111 SFT2D2O95562 160 aa11.77□□□□□ -0.53
TRIM13-208ENST00000478111 VAMP1P23763 118 aa11.77□□□□□ -0.53
TRIM13-208ENST00000478111 FAUP35544 74 aaKnown RBP11.77□□□□□ -0.53
TRIM13-208ENST00000478111 PPP1R1AQ13522 171 aa11.77□□□□□ -0.53
TRIM13-208ENST00000478111 SPINK13Q1W4C9 94 aa11.77□□□□□ -0.53
TRIM13-208ENST00000478111 RNF182Q8N6D2 247 aa11.77□□□□□ -0.53
TRIM13-208ENST00000478111 MCFD2Q8NI22 146 aa11.77□□□□□ -0.53
TRIM13-208ENST00000478111 TMEM208Q9BTX3 173 aa11.77□□□□□ -0.53
TRIM13-208ENST00000478111 V9GYH0 126 aa11.77□□□□□ -0.53
TRIM13-208ENST00000478111 PLAC8L1A1L4L8 177 aa11.76□□□□□ -0.53
TRIM13-208ENST00000478111 ZNF705GA8MUZ8 300 aaPredicted RBP11.76□□□□□ -0.53
TRIM13-208ENST00000478111 HOXB5P09067 269 aa11.76□□□□□ -0.53
TRIM13-208ENST00000478111 RPP30P78346 268 aaKnown RBP11.76□□□□□ -0.53
TRIM13-208ENST00000478111 SPANXN5Q5MJ07 72 aa11.76□□□□□ -0.53
TRIM13-208ENST00000478111 ACOT7LQ6ZUV0 252 aa11.76□□□□□ -0.53
TRIM13-208ENST00000478111 ZNF575Q86XF7 245 aa11.76□□□□□ -0.53
TRIM13-208ENST00000478111 TOMM5Q8N4H5 51 aa11.76□□□□□ -0.53
TRIM13-208ENST00000478111 GPR82Q96P67 336 aa11.76□□□□□ -0.53
TRIM13-208ENST00000478111 SLC25A21Q9BQT8 299 aaPredicted RBP11.76□□□□□ -0.53
TRIM13-208ENST00000478111 LYRM9A8MSI8 78 aa11.75□□□□□ -0.53
TRIM13-208ENST00000478111 H3BP45 60 aa11.75□□□□□ -0.53
TRIM13-208ENST00000478111 H3BRN7 92 aa11.75□□□□□ -0.53
TRIM13-208ENST00000478111 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
TRIM13-208ENST00000478111 AZU1P20160 251 aa11.75□□□□□ -0.53
TRIM13-208ENST00000478111 ID3Q02535 119 aa11.75□□□□□ -0.53
TRIM13-208ENST00000478111 C1orf134Q5TEV5 83 aa11.75□□□□□ -0.53
TRIM13-208ENST00000478111 TMEM144Q7Z5S9 345 aa11.75□□□□□ -0.53
TRIM13-208ENST00000478111 TMEM147Q9BVK8 224 aa11.75□□□□□ -0.53
TRIM13-208ENST00000478111 KRTAP4-5Q9BYR2 181 aa11.75□□□□□ -0.53
TRIM13-208ENST00000478111 SLC25A39Q9BZJ4 359 aaPredicted RBP11.75□□□□□ -0.53
TRIM13-208ENST00000478111 PMS2P5A8MQ11 134 aa11.74□□□□□ -0.53
TRIM13-208ENST00000478111 INSP01308 110 aa11.74□□□□□ -0.53
TRIM13-208ENST00000478111 TSPOP30536 169 aa11.74□□□□□ -0.53
TRIM13-208ENST00000478111 AP3S2P59780 193 aa11.74□□□□□ -0.53
TRIM13-208ENST00000478111 AKR1C1Q04828 323 aa11.74□□□□□ -0.53
TRIM13-208ENST00000478111 PYDC2Q56P42 97 aa11.74□□□□□ -0.53
TRIM13-208ENST00000478111 BAP18Q8IXM2 172 aa11.74□□□□□ -0.53
TRIM13-208ENST00000478111 C15orf53Q8NAA6 179 aa11.74□□□□□ -0.53
TRIM13-208ENST00000478111 SHANK2-AS3Q9BTD1 123 aa11.74□□□□□ -0.53
TRIM13-208ENST00000478111 STRAPQ9Y3F4 350 aaKnown RBP11.74□□□□□ -0.53
TRIM13-208ENST00000478111 TRAV12-2A0A075B6T6 113 aa11.73□□□□□ -0.53
TRIM13-208ENST00000478111 FAM3BP58499 235 aaPredicted RBP11.73□□□□□ -0.53
TRIM13-208ENST00000478111 FGL1Q08830 312 aa11.73□□□□□ -0.53
TRIM13-208ENST00000478111 FCN2Q15485 313 aa11.73□□□□□ -0.53
TRIM13-208ENST00000478111 SOHLH1Q5JUK2 328 aa11.73□□□□□ -0.53
TRIM13-208ENST00000478111 CYP2G1PQ6ZSU1 146 aa11.73□□□□□ -0.53
TRIM13-208ENST00000478111 ADAP1O75689 374 aa11.72□□□□□ -0.53
TRIM13-208ENST00000478111 DEFB130BP0DP73 79 aa11.72□□□□□ -0.53
TRIM13-208ENST00000478111 DEFB130AP0DP74 79 aa11.72□□□□□ -0.53
TRIM13-208ENST00000478111 PLP1P60201 277 aa11.72□□□□□ -0.53
TRIM13-208ENST00000478111 B2MP61769 119 aa11.72□□□□□ -0.53
TRIM13-208ENST00000478111 POLR2GP62487 172 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRIM13-208ENST00000478111 DEDD2Q8WXF8 326 aa11.72□□□□□ -0.53
TRIM13-208ENST00000478111 BOLA2-SMG1P6H3BVE0 249 aa11.71□□□□□ -0.53
TRIM13-208ENST00000478111 CCNKO75909 580 aa11.71□□□□□ -0.53
TRIM13-208ENST00000478111 IL5P05113 134 aa11.71□□□□□ -0.53
TRIM13-208ENST00000478111 CXCL3P19876 107 aa11.71□□□□□ -0.53
TRIM13-208ENST00000478111 S100A7P31151 101 aa11.71□□□□□ -0.53
TRIM13-208ENST00000478111 PATE2Q6UY27 113 aa11.71□□□□□ -0.53
TRIM13-208ENST00000478111 ZNF738Q8NE65 137 aa11.71□□□□□ -0.53
TRIM13-208ENST00000478111 ZNRF2Q8NHG8 242 aa11.71□□□□□ -0.53
TRIM13-208ENST00000478111 UHRF2Q96PU4 802 aa11.71□□□□□ -0.53
TRIM13-208ENST00000478111 HIGD1AQ9Y241 93 aa11.71□□□□□ -0.53
TRIM13-208ENST00000478111 A0A087X0K7 114 aa11.7□□□□□ -0.54
TRIM13-208ENST00000478111 C9orf170A2RU37 121 aa11.7□□□□□ -0.54
TRIM13-208ENST00000478111 MRPS12O15235 138 aaKnown RBP11.7□□□□□ -0.54
TRIM13-208ENST00000478111 HYPMO75409 117 aa11.7□□□□□ -0.54
TRIM13-208ENST00000478111 RPL7P18124 248 aaKnown RBP11.7□□□□□ -0.54
TRIM13-208ENST00000478111 RAP2BP61225 183 aa11.7□□□□□ -0.54
TRIM13-208ENST00000478111 TNP2Q05952 138 aa11.7□□□□□ -0.54
TRIM13-208ENST00000478111 CCDC190Q86UF4 302 aa11.7□□□□□ -0.54
TRIM13-208ENST00000478111 OR8A1Q8NGG7 326 aa11.7□□□□□ -0.54
TRIM13-208ENST00000478111 PSENENQ9NZ42 101 aa11.7□□□□□ -0.54
TRIM13-208ENST00000478111 NBDYA0A0U1RRE5 68 aa11.69□□□□□ -0.54
TRIM13-208ENST00000478111 SMCO3A2RU48 225 aa11.69□□□□□ -0.54
TRIM13-208ENST00000478111 NOL3O60936 208 aaKnown RBP11.69□□□□□ -0.54
TRIM13-208ENST00000478111 LINC00869P0C866 280 aa11.69□□□□□ -0.54
TRIM13-208ENST00000478111 PRB4P10163 310 aaPredicted RBP11.69□□□□□ -0.54
TRIM13-208ENST00000478111 UBE2MP61081 183 aaKnown RBP11.69□□□□□ -0.54
TRIM13-208ENST00000478111 HIST1H1AQ02539 215 aaPredicted RBP11.69□□□□□ -0.54
TRIM13-208ENST00000478111 PSG3Q16557 428 aa11.69□□□□□ -0.54
TRIM13-208ENST00000478111 SMIM8Q96KF7 97 aa11.69□□□□□ -0.54
TRIM13-208ENST00000478111 LINC01587Q99440 93 aa11.69□□□□□ -0.54
TRIM13-208ENST00000478111 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
TRIM13-208ENST00000478111 CBY3A6NI87 242 aa11.68□□□□□ -0.54
TRIM13-208ENST00000478111 F5H768 121 aa11.68□□□□□ -0.54
TRIM13-208ENST00000478111 ATP5G1P05496 136 aa11.68□□□□□ -0.54
TRIM13-208ENST00000478111 OR5G3P0C626 314 aa11.68□□□□□ -0.54
TRIM13-208ENST00000478111 ATP5G3P48201 142 aa11.68□□□□□ -0.54
TRIM13-208ENST00000478111 SELENOTP62341 195 aa11.68□□□□□ -0.54
TRIM13-208ENST00000478111 TMEM14EPQ6UXP3 125 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms