RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SLC25A39Q9BZJ4 359 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-222ENST00000478095 ARV1Q9H2C2 271 aa7.61□□□□□ -1.19
HDAC6-222ENST00000478095 FBXL17Q9UF56 701 aa7.61□□□□□ -1.19
HDAC6-222ENST00000478095 HSPB11Q9Y547 144 aa7.61□□□□□ -1.19
HDAC6-222ENST00000478095 LOC102724200A0A096LPH7 203 aaPredicted RBP7.6□□□□□ -1.19
HDAC6-222ENST00000478095 COX7A2P2O60397 106 aa7.6□□□□□ -1.19
HDAC6-222ENST00000478095 LYL1P12980 280 aa7.6□□□□□ -1.19
HDAC6-222ENST00000478095 B2MP61769 119 aa7.6□□□□□ -1.19
HDAC6-222ENST00000478095 PSMG4Q5JS54 123 aa7.6□□□□□ -1.19
HDAC6-222ENST00000478095 Q8N3U1 123 aa7.6□□□□□ -1.19
HDAC6-222ENST00000478095 ATP5SQ99766 215 aa7.6□□□□□ -1.19
HDAC6-222ENST00000478095 FAM110AQ9BQ89 295 aa7.6□□□□□ -1.19
HDAC6-222ENST00000478095 TM2D3Q9BRN9 247 aa7.6□□□□□ -1.19
HDAC6-222ENST00000478095 SHANK2-AS3Q9BTD1 123 aa7.6□□□□□ -1.19
HDAC6-222ENST00000478095 NPCDR1Q9BY65 106 aa7.6□□□□□ -1.19
HDAC6-222ENST00000478095 TGP01266 2768 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 KNCNA6PVL3 124 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 S100A7P31151 101 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 GALR1P47211 349 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 CMC4P56277 68 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-222ENST00000478095 OPCMLQ14982 345 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 MORN5Q5VZ52 161 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 Q6ZRG5 221 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 LINC00305Q7Z4B0 112 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 OR2T35Q8NGX2 323 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 TMEM37Q8WXS4 190 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 RCHY1Q96PM5 261 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 RSG1Q9BU20 258 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 WDR61Q9GZS3 305 aaKnown RBP7.59□□□□□ -1.19
HDAC6-222ENST00000478095 ZMAT4Q9H898 229 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 SLC39A9Q9NUM3 307 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 PXMP4Q9Y6I8 212 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 U3KQK5 164 aa7.59□□□□□ -1.19
HDAC6-222ENST00000478095 FXYD6-FXYD2A0A087WZ82 144 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 SMLR1H3BR10 107 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 SOCS3O14543 225 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 MPDU1O75352 247 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 SNRPCP09234 159 aaKnown RBP7.58□□□□□ -1.2
HDAC6-222ENST00000478095 RPL29P47914 159 aaKnown RBP7.58□□□□□ -1.2
HDAC6-222ENST00000478095 DEFB1P60022 68 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 SNRPD3P62318 126 aaKnown RBP7.58□□□□□ -1.2
HDAC6-222ENST00000478095 FGL1Q08830 312 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 GCSAMLQ5JQS6 135 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 ACTL10Q5JWF8 245 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 PXDC1Q5TGL8 231 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 C10orf113Q5VZT2 155 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 CHAC2Q8WUX2 184 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 C17orf77Q96MU5 243 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 LINC00052Q96N35 136 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 SPATA25Q9BR10 227 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 WFDC1Q9HC57 220 aa7.58□□□□□ -1.2
HDAC6-222ENST00000478095 TRAV5A0A0B4J249 113 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 RPL7P18124 248 aaKnown RBP7.57□□□□□ -1.2
HDAC6-222ENST00000478095 ATF4P18848 351 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-222ENST00000478095 APOC4P55056 127 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 IGFL4Q6B9Z1 124 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 S100A7AQ86SG5 101 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 STHQ8IWL8 128 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 ZNF709Q8N972 641 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 OR1L4Q8NGR5 311 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 ASB13Q8WXK3 278 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 C16orf92Q96LL3 132 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 GPR82Q96P67 336 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 DNAJC4Q9NNZ3 241 aa7.57□□□□□ -1.2
HDAC6-222ENST00000478095 HUWE1Q7Z6Z7 4374 aaKnown RBP7.57□□□□□ -1.2
HDAC6-222ENST00000478095 G3V3Q6 166 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 H3BTX0 84 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 MRPS12O15235 138 aaKnown RBP7.56□□□□□ -1.2
HDAC6-222ENST00000478095 IFNA5P01569 189 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 ID1P41134 155 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 PSMB3P49720 205 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 DEFB135Q30KP9 77 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 RNF182Q8N6D2 247 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 SCGB1C1Q8TD33 95 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 AQP10Q96PS8 301 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 PFDN5Q99471 154 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 RFNGQ9Y644 331 aa7.56□□□□□ -1.2
HDAC6-222ENST00000478095 TRAV8-2A0A0B4J237 113 aa7.55□□□□□ -1.2
HDAC6-222ENST00000478095 RNF222A6NCQ9 220 aa7.55□□□□□ -1.2
HDAC6-222ENST00000478095 C17orf112F2Z3M2 114 aa7.55□□□□□ -1.2
HDAC6-222ENST00000478095 F6UB75 175 aa7.55□□□□□ -1.2
HDAC6-222ENST00000478095 ISLRO14498 428 aa7.55□□□□□ -1.2
HDAC6-222ENST00000478095 PRB4P10163 310 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-222ENST00000478095 MEOX2P50222 304 aa7.55□□□□□ -1.2
HDAC6-222ENST00000478095 GDF5OSQ5U4N7 250 aa7.55□□□□□ -1.2
HDAC6-222ENST00000478095 SPATA31B1PQ5VZV4 182 aa7.55□□□□□ -1.2
HDAC6-222ENST00000478095 TRPT1Q86TN4 253 aaKnown RBP7.55□□□□□ -1.2
HDAC6-222ENST00000478095 CSTL1Q9H114 145 aa7.55□□□□□ -1.2
HDAC6-222ENST00000478095 SEPSECSQ9HD40 501 aaKnown RBP7.55□□□□□ -1.2
HDAC6-222ENST00000478095 KCNIP2Q9NS61 270 aa7.55□□□□□ -1.2
HDAC6-222ENST00000478095 A0A087X0K7 114 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 KIR2DL5BA0A0G2JN68 375 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 KIR2DL5BA0A0G2JPC4 375 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 ARPC5O15511 151 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 CA1P00915 261 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-222ENST00000478095 IGKV3-20P01619 116 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 HLA-DMBP28068 263 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 FFAR4Q5NUL3 377 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms