RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 ATP6V0CP27449 155 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 NKX2-5P52952 324 aaPredicted RBP8.6□□□□□ -1.03
CBWD3-206ENST00000478048 TCF24Q7RTU0 167 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 LINC00305Q7Z4B0 112 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 NARS2Q96I59 477 aaKnown RBP8.6□□□□□ -1.03
CBWD3-206ENST00000478048 ARPC5LQ9BPX5 153 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 SH3BGRL3Q9H299 93 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 SLC25A22Q9H936 323 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 DNAJC4Q9NNZ3 241 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 BORCS7-ASMTA0A0B4J1R7 106 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 BCL2L11O43521 198 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 FFAR4Q5NUL3 377 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 KPRPQ5T749 579 aaPredicted RBP8.6□□□□□ -1.03
CBWD3-206ENST00000478048 PXDC1Q5TGL8 231 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 C10orf113Q5VZT2 155 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 LAMTOR1Q6IAA8 161 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 RBPMS2Q6ZRY4 209 aaKnown RBP8.6□□□□□ -1.03
CBWD3-206ENST00000478048 GBGT1Q8N5D6 347 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 OR2K2Q8NGT1 345 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 SHANK2-AS3Q9BTD1 123 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 TMEM231Q9H6L2 316 aa8.6□□□□□ -1.03
CBWD3-206ENST00000478048 TRAV5A0A0B4J249 113 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 KANTRA0A1W2PQU2 76 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 PFDN1O60925 122 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 JTBO76095 146 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 BMI1P35226 326 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 TFPI2P48307 235 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 GUCA2BQ16661 112 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 SPATA31B1PQ5VZV4 182 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 LCN12Q6JVE5 192 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 C9orf62Q8N4C0 152 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 OR1L4Q8NGR5 311 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 GRAMD2BQ96HH9 432 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 PRR25Q96S07 402 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 SLC25A32Q9H2D1 315 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 KCNIP2Q9NS61 270 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 TIMM9Q9Y5J7 89 aa8.59□□□□□ -1.03
CBWD3-206ENST00000478048 TSPAN4O14817 238 aa8.58□□□□□ -1.04
CBWD3-206ENST00000478048 GP9P14770 177 aa8.58□□□□□ -1.04
CBWD3-206ENST00000478048 RPL11P62913 178 aaKnown RBP8.58□□□□□ -1.04
CBWD3-206ENST00000478048 SIGLEC15Q6ZMC9 328 aa8.58□□□□□ -1.04
CBWD3-206ENST00000478048 OR8I2Q8N0Y5 310 aa8.58□□□□□ -1.04
CBWD3-206ENST00000478048 PFDN5Q99471 154 aa8.58□□□□□ -1.04
CBWD3-206ENST00000478048 PSMG3Q9BT73 122 aaPredicted RBP8.58□□□□□ -1.04
CBWD3-206ENST00000478048 ZNF471Q9BX82 626 aaPredicted RBP8.58□□□□□ -1.04
CBWD3-206ENST00000478048 SEPSECSQ9HD40 501 aaKnown RBP8.58□□□□□ -1.04
CBWD3-206ENST00000478048 PFDN2Q9UHV9 154 aa8.58□□□□□ -1.04
CBWD3-206ENST00000478048 ZNF256Q9Y2P7 627 aaPredicted RBP8.58□□□□□ -1.04
CBWD3-206ENST00000478048 SMAD5-AS1Q9Y6J3 95 aa8.58□□□□□ -1.04
CBWD3-206ENST00000478048 TRAV25A0A0B4J276 109 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 EIF3GO75821 320 aaKnown RBP eCLIP8.57□□□□□ -1.04
CBWD3-206ENST00000478048 C1orf194Q5T5A4 169 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 FAM78BQ5VT40 261 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 GATAD1Q8WUU5 269 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 C17orf77Q96MU5 243 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 MS4A6AQ9H2W1 248 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 CD7P09564 240 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 RAB2AP61019 212 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 MIR17HGQ75NE6 70 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 STXBP6Q8NFX7 210 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 OR2G3Q8NGZ4 309 aa8.57□□□□□ -1.04
CBWD3-206ENST00000478048 GNPNAT1Q96EK6 184 aaPredicted RBP8.57□□□□□ -1.04
CBWD3-206ENST00000478048 HELTA6NFD8 242 aa8.56□□□□□ -1.04
CBWD3-206ENST00000478048 MRPS12O15235 138 aaKnown RBP8.56□□□□□ -1.04
CBWD3-206ENST00000478048 CD5P06127 495 aa8.56□□□□□ -1.04
CBWD3-206ENST00000478048 SNRPCP09234 159 aaKnown RBP8.56□□□□□ -1.04
CBWD3-206ENST00000478048 SPP1P10451 314 aa8.56□□□□□ -1.04
CBWD3-206ENST00000478048 M6PRP20645 277 aa8.56□□□□□ -1.04
CBWD3-206ENST00000478048 ZNF124Q15973 351 aa8.56□□□□□ -1.04
CBWD3-206ENST00000478048 FAM24BQ8N5W8 94 aa8.56□□□□□ -1.04
CBWD3-206ENST00000478048 SPAG8Q99932 426 aaPredicted RBP8.56□□□□□ -1.04
CBWD3-206ENST00000478048 AURKAIP1Q9NWT8 199 aaPredicted RBP8.56□□□□□ -1.04
CBWD3-206ENST00000478048 BOLA2-SMG1P6H3BVE0 249 aa8.55□□□□□ -1.04
CBWD3-206ENST00000478048 S100A7P31151 101 aa8.55□□□□□ -1.04
CBWD3-206ENST00000478048 SERF2P84101 59 aa8.55□□□□□ -1.04
CBWD3-206ENST00000478048 ACOT6Q3I5F7 207 aaPredicted RBP8.55□□□□□ -1.04
CBWD3-206ENST00000478048 DCANP1Q8TF63 244 aa8.55□□□□□ -1.04
CBWD3-206ENST00000478048 FUT9Q9Y231 359 aa8.55□□□□□ -1.04
CBWD3-206ENST00000478048 K7EQG2 157 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
CBWD3-206ENST00000478048 GALR1P47211 349 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 PAFAH1B2P68402 229 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 FAM122CQ6P4D5 195 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 S100A7AQ86SG5 101 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 BAP18Q8IXM2 172 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 Q8N1Y9 231 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 RPP25LQ8N5L8 163 aaKnown RBP8.54□□□□□ -1.04
CBWD3-206ENST00000478048 OR10G4Q8NGN3 311 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 OR10G9Q8NGN4 311 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 OR10G7Q8NGN6 311 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 STOML3Q8TAV4 291 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 FAM167A-AS1Q96KT0 104 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 SLC25A2Q9BXI2 301 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 WFDC10AQ9H1F0 79 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 NRN1Q9NPD7 142 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 RPRMQ9NS64 109 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 UBQLN2Q9UHD9 624 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 OR4C46A6NHA9 309 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 H3BTX0 84 aa8.54□□□□□ -1.04
CBWD3-206ENST00000478048 HMGB3O15347 200 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms