RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 PRRC2CQ9Y520 2896 aaKnown RBP14.36□□□□□ -0.11
CCM2-209ENST00000477605 IGHV3-21A0A0B4J1V1 117 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 A6NNC1 897 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 COL8A1P27658 744 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 LEMD1Q68G75 181 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 S100A7AQ86SG5 101 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 VKORC1Q9BQB6 163 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 SHANK2-AS3Q9BTD1 123 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 ICE1Q9Y2F5 2266 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 IGLV2-11P01706 119 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 TSPOP30536 169 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 LCN12Q6JVE5 192 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 BPIFA4PQ86YQ2 179 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 TMEM75Q8N9X5 138 aa14.35□□□□□ -0.11
CCM2-209ENST00000477605 FASNP49327 2511 aaKnown RBP14.34□□□□□ -0.11
CCM2-209ENST00000477605 LOC102724200A0A096LPH7 203 aaPredicted RBP14.34□□□□□ -0.11
CCM2-209ENST00000477605 A0A1B0GW15 77 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 CHEK1O14757 476 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 IGKV1-17P01599 117 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 Q56UQ5 140 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 OR4F17Q8NGA8 305 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 COL6A6A6NMZ7 2263 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 TRBV19A0A075B6N1 114 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 K7EQM0 130 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 APELAP0DMC3 54 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 LHFPL4Q7Z7J7 247 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 GATD1Q8NB37 220 aa14.34□□□□□ -0.11
CCM2-209ENST00000477605 GSX1Q9H4S2 264 aaPredicted RBP14.34□□□□□ -0.11
CCM2-209ENST00000477605 BSNQ9UPA5 3926 aa14.33□□□□□ -0.11
CCM2-209ENST00000477605 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.33□□□□□ -0.12
CCM2-209ENST00000477605 H3BRN7 92 aa14.33□□□□□ -0.12
CCM2-209ENST00000477605 PLGLAQ15195 96 aa14.33□□□□□ -0.12
CCM2-209ENST00000477605 FAM120AOSQ5T036 256 aa14.33□□□□□ -0.12
CCM2-209ENST00000477605 LY6G5BQ8NDX9 201 aa14.33□□□□□ -0.12
CCM2-209ENST00000477605 CFAP46Q8IYW2 2715 aa14.33□□□□□ -0.12
CCM2-209ENST00000477605 H3BTX0 84 aa14.32□□□□□ -0.12
CCM2-209ENST00000477605 APOHP02749 345 aaPredicted RBP14.32□□□□□ -0.12
CCM2-209ENST00000477605 GOLT1AQ6ZVE7 132 aa14.32□□□□□ -0.12
CCM2-209ENST00000477605 ZNF843Q8N446 348 aa14.32□□□□□ -0.12
CCM2-209ENST00000477605 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.32□□□□□ -0.12
CCM2-209ENST00000477605 K7EIM0 57 aa14.32□□□□□ -0.12
CCM2-209ENST00000477605 LIPFP07098 398 aa14.32□□□□□ -0.12
CCM2-209ENST00000477605 COX7A1P24310 79 aa14.32□□□□□ -0.12
CCM2-209ENST00000477605 PRNTQ86SH4 94 aa14.32□□□□□ -0.12
CCM2-209ENST00000477605 ST20Q9HBF5 79 aa14.32□□□□□ -0.12
CCM2-209ENST00000477605 TRAV30A0A087WSZ9 112 aa14.31□□□□□ -0.12
CCM2-209ENST00000477605 CNIH1O95406 144 aa14.31□□□□□ -0.12
CCM2-209ENST00000477605 RIGQ13278 110 aa14.31□□□□□ -0.12
CCM2-209ENST00000477605 Q6AWC8 147 aa14.31□□□□□ -0.12
CCM2-209ENST00000477605 ATOH7Q8N100 152 aa14.31□□□□□ -0.12
CCM2-209ENST00000477605 CIARTQ8N365 385 aaPredicted RBP14.31□□□□□ -0.12
CCM2-209ENST00000477605 STPG4Q8N801 248 aa14.31□□□□□ -0.12
CCM2-209ENST00000477605 RAB1BQ9H0U4 201 aa14.31□□□□□ -0.12
CCM2-209ENST00000477605 IGLL1P15814 213 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 EXOC3-AS1Q8N2X6 119 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 NPBQ8NG41 125 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 PPP1R14DQ9NXH3 145 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 BOD1L1Q8NFC6 3051 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 IGHV1-24A0A0C4DH33 117 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 A0A1B0GUT8 65 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 SYS1-DBNDD2H3BUS1 97 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 LEPROTL1O95214 131 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 NPSP0C0P6 89 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 MUC15Q8N387 334 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 OR11H6Q8NGC7 330 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 ORAOV1Q8WV07 137 aa14.3□□□□□ -0.12
CCM2-209ENST00000477605 ZNF48Q96MX3 618 aaPredicted RBP14.3□□□□□ -0.12
CCM2-209ENST00000477605 TLN1Q9Y490 2541 aaKnown RBP14.3□□□□□ -0.12
CCM2-209ENST00000477605 TRAV8-1A0A0A6YYK1 113 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 WI2-2373I1.2A0A1W2PRP0 233 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 NBR2O15453 112 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 HTR1DP28221 377 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 CEACAM3P40198 252 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 MAJINQ3KP22 176 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 SIGLEC15Q6ZMC9 328 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 DPM3Q9P2X0 92 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 SERTM2A0A1B0GWG4 89 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 TIMM23O14925 209 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 NDUFA3O95167 84 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 TFPI2P48307 235 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 DLX1P56177 255 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 PDE6HQ13956 83 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 PSG3Q16557 428 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 FBXL19-AS1Q494R0 122 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 PET117Q6UWS5 81 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 ZNF491Q8N8L2 437 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 RNF125Q96EQ8 232 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 CLEC5AQ9NY25 188 aa14.29□□□□□ -0.12
CCM2-209ENST00000477605 ZNF462Q96JM2 2506 aa14.28□□□□□ -0.12
CCM2-209ENST00000477605 OR4C46A6NHA9 309 aa14.28□□□□□ -0.12
CCM2-209ENST00000477605 OVOL3O00110 214 aa14.28□□□□□ -0.12
CCM2-209ENST00000477605 HLA-DRB1P01911 266 aa14.28□□□□□ -0.12
CCM2-209ENST00000477605 ARL6IP6Q8N6S5 226 aa14.28□□□□□ -0.12
CCM2-209ENST00000477605 TMEM191AQ9H0A3 160 aa14.28□□□□□ -0.12
CCM2-209ENST00000477605 HSPB8Q9UJY1 196 aa14.28□□□□□ -0.12
CCM2-209ENST00000477605 PSG8Q9UQ74 426 aa14.28□□□□□ -0.12
CCM2-209ENST00000477605 SPTA1P02549 2419 aa14.28□□□□□ -0.12
CCM2-209ENST00000477605 NAV3Q8IVL0 2385 aa14.28□□□□□ -0.12
CCM2-209ENST00000477605 SH2D7A6NKC9 451 aaPredicted RBP14.27□□□□□ -0.12
CCM2-209ENST00000477605 LYNX1G3V0Z9 82 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms