RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 COQ8AQ8NI60 647 aa3.9□□□□□ -1.78
VPS45-207ENST00000477558 RNASE11Q8TAA1 199 aaKnown RBP3.9□□□□□ -1.78
VPS45-207ENST00000477558 DTD1Q8TEA8 209 aa3.9□□□□□ -1.78
VPS45-207ENST00000477558 SEC22CQ9BRL7 303 aa3.9□□□□□ -1.78
VPS45-207ENST00000477558 RBKSQ9H477 322 aa3.9□□□□□ -1.78
VPS45-207ENST00000477558 RCL1Q9Y2P8 373 aaKnown RBP3.9□□□□□ -1.78
VPS45-207ENST00000477558 STRAPQ9Y3F4 350 aaKnown RBP3.9□□□□□ -1.78
VPS45-207ENST00000477558 S4R3C0 116 aa3.9□□□□□ -1.78
VPS45-207ENST00000477558 U3KQ87 197 aa3.9□□□□□ -1.78
VPS45-207ENST00000477558 WI2-2373I1.2A0A1W2PRP0 233 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 OR2T8A6NH00 312 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 PMS2P5A8MQ11 134 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 K7EMT4 169 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 SYNGR2O43760 224 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 CLN5O75503 358 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 S100A6P06703 90 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 IGLC1P0CG04 106 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 SLC25A4P12235 298 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 SUB1P53999 127 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS45-207ENST00000477558 PAX9P55771 341 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 RBPMS2Q6ZRY4 209 aaKnown RBP3.89□□□□□ -1.79
VPS45-207ENST00000477558 STPG4Q8N801 248 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 OR1S1Q8NH92 325 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 ENKURQ8TC29 256 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 MARC2Q969Z3 335 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 CIB3Q96Q77 187 aaPredicted RBP3.89□□□□□ -1.79
VPS45-207ENST00000477558 OR4C12Q96R67 309 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 DAZ1Q9NQZ3 744 aaKnown RBP3.89□□□□□ -1.79
VPS45-207ENST00000477558 SACSQ9NZJ4 4579 aa3.89□□□□□ -1.79
VPS45-207ENST00000477558 NBEAL2Q6ZNJ1 2754 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 IGKV1D-37A0A075B6S9 117 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 IGKV1OR2-108A0A075B7D4 117 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 IGHV3-21A0A0B4J1V1 117 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 CEBPZOSA8MTT3 80 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 FNDC10F2Z333 226 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 NUPL2O15504 423 aaKnown RBP3.88□□□□□ -1.79
VPS45-207ENST00000477558 SAP30O75446 220 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 MED6O75586 246 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 FOLR2P14207 255 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 SPNP16150 400 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 CBLN1P23435 193 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 GPX4P36969 197 aaPredicted RBP3.88□□□□□ -1.79
VPS45-207ENST00000477558 OPRK1P41145 380 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 NPBWR1P48145 328 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 AP2S1P53680 142 aaPredicted RBP3.88□□□□□ -1.79
VPS45-207ENST00000477558 TAS2R30P59541 319 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 DEFA1P59665 94 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 DEFA3P59666 94 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 POLR2GP62487 172 aaKnown RBP eCLIP3.88□□□□□ -1.79
VPS45-207ENST00000477558 GAMTQ14353 236 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 IAH1Q2TAA2 248 aaPredicted RBP3.88□□□□□ -1.79
VPS45-207ENST00000477558 DEFB114Q30KQ6 69 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 FAM106AQ4KMX7 169 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 PLET1Q6UQ28 207 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 TMEM14EPQ6UXP3 125 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 ZNF600Q6ZNG1 722 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 SLC16A13Q7RTY0 426 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 TRPT1Q86TN4 253 aaKnown RBP3.88□□□□□ -1.79
VPS45-207ENST00000477558 THAP8Q8NA92 274 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 CACNG8Q8WXS5 425 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 PINX1Q96BK5 328 aaKnown RBP3.88□□□□□ -1.79
VPS45-207ENST00000477558 ENY2Q9NPA8 101 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 TECRQ9NZ01 308 aaKnown RBP3.88□□□□□ -1.79
VPS45-207ENST00000477558 MLXQ9UH92 298 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 ZNF256Q9Y2P7 627 aaPredicted RBP3.88□□□□□ -1.79
VPS45-207ENST00000477558 RYR3Q15413 4870 aa3.88□□□□□ -1.79
VPS45-207ENST00000477558 TRAV25A0A0B4J276 109 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 IZUMO1RA6ND01 250 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 SMIM1B2RUZ4 78 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 INMT-MINDY4F8WBC2 141 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 K7EPK0 472 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 CCSO14618 274 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 GNG7O60262 68 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 IFNA21P01568 189 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 IGHV3-48P01763 117 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 PRB2P02812 416 aaPredicted RBP3.87□□□□□ -1.79
VPS45-207ENST00000477558 CFC1BP0CG36 223 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 CFC1P0CG37 223 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 GP9P14770 177 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 NKX2-1P43699 371 aaPredicted RBP3.87□□□□□ -1.79
VPS45-207ENST00000477558 RND2P52198 227 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 H2BFSP57053 126 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 YPEL3P61236 119 aaPredicted RBP3.87□□□□□ -1.79
VPS45-207ENST00000477558 TATDN3Q17R31 274 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 Q56UQ5 140 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 LCN12Q6JVE5 192 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 TOMM20LQ6UXN7 152 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 TMEM61Q8N0U2 210 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 C12orf45Q8N5I9 185 aaPredicted RBP3.87□□□□□ -1.79
VPS45-207ENST00000477558 OR1S2Q8NGQ3 325 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 SMIM8Q96KF7 97 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 C2orf50Q96LR7 162 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 RAB40CQ96S21 281 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 TPPP3Q9BW30 176 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 VSIRQ9H7M9 311 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 MRPL27Q9P0M9 148 aaKnown RBP3.87□□□□□ -1.79
VPS45-207ENST00000477558 UFC1Q9Y3C8 167 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 RYR2Q92736 4967 aa3.87□□□□□ -1.79
VPS45-207ENST00000477558 DYNC2H1Q8NCM8 4307 aaKnown RBP3.87□□□□□ -1.79
VPS45-207ENST00000477558 TRAV30A0A087WSZ9 112 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms