RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 RNF126Q9BV68 326 aa11.32□□□□□ -0.6
CLDN11-204ENST00000477531 NPVFQ9HCQ7 196 aa11.32□□□□□ -0.6
CLDN11-204ENST00000477531 DOK5Q9P104 306 aa11.32□□□□□ -0.6
CLDN11-204ENST00000477531 CELA1Q9UNI1 258 aa11.32□□□□□ -0.6
CLDN11-204ENST00000477531 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
CLDN11-204ENST00000477531 RFNGQ9Y644 331 aa11.32□□□□□ -0.6
CLDN11-204ENST00000477531 IGHV4-4A0A075B6R2 117 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 A0A0J9YX75 114 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 ZNF705FA8MVS1 300 aaPredicted RBP11.31□□□□□ -0.6
CLDN11-204ENST00000477531 FNDC10F2Z333 226 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 F6UB75 175 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 TSC22D2O75157 780 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
CLDN11-204ENST00000477531 OR5G3P0C626 314 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 LINC00869P0C866 280 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 ZNF705DP0CH99 300 aaPredicted RBP11.31□□□□□ -0.6
CLDN11-204ENST00000477531 ZNF705BP0CI00 300 aaPredicted RBP11.31□□□□□ -0.6
CLDN11-204ENST00000477531 RPL7P18124 248 aaKnown RBP11.31□□□□□ -0.6
CLDN11-204ENST00000477531 BTCP35070 178 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 EMP1P54849 157 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 DLK1P80370 383 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 ZNF767PQ75MW2 155 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 SCRT1Q9BWW7 348 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 SLC25A39Q9BZJ4 359 aaPredicted RBP11.31□□□□□ -0.6
CLDN11-204ENST00000477531 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
CLDN11-204ENST00000477531 TEX48A0A1B0GUV7 120 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 PMS2P5A8MQ11 134 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 H3BRN7 92 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 L7N2F9 121 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 LYRM1O43325 122 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 HBE1P02100 147 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 DEFA1P59665 94 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 DEFA3P59666 94 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 VAMP2P63027 116 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 MZT2BQ6NZ67 158 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 TEPPQ6URK8 271 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 TMEM14EPQ6UXP3 125 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 GSG1LQ6UXU4 331 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 ZNF709Q8N972 641 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 C20orf173Q96LM9 149 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 SHANK2-AS3Q9BTD1 123 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 TMEM208Q9BTX3 173 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 C20orf85Q9H1P6 137 aa11.3□□□□□ -0.6
CLDN11-204ENST00000477531 AMBPP02760 352 aa11.29□□□□□ -0.6
CLDN11-204ENST00000477531 PLP1P60201 277 aa11.29□□□□□ -0.6
CLDN11-204ENST00000477531 ASAH1Q13510 395 aa11.29□□□□□ -0.6
CLDN11-204ENST00000477531 LRRC20Q8TCA0 184 aa11.29□□□□□ -0.6
CLDN11-204ENST00000477531 FAM25EA8MYX2 175 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 GOSR2O14653 212 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 PLA2G10O15496 165 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 CCNKO75909 580 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 PXDC1Q5TGL8 231 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 ZNF738Q8NE65 137 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 NDUFAF3Q9BU61 184 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 GGACTQ9BVM4 153 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 ARL6Q9H0F7 186 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 DNAH10Q8IVF4 4471 aa11.28□□□□□ -0.6
CLDN11-204ENST00000477531 TRAV6A0A075B6T7 132 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 C5orf51A6NDU8 294 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 MBPP02686 304 aaPredicted RBP11.27□□□□□ -0.61
CLDN11-204ENST00000477531 TCRBP04435 133 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 BCAP31P51572 246 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 PRR20EP86478 221 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 PRR20CP86479 221 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 PRR20DP86480 221 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 PRR20BP86481 221 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 PRR20AP86496 221 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 SLC38A11Q08AI6 406 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 ZNF546Q86UE3 836 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 IGF2BP2-AS1Q96M15 143 aa11.27□□□□□ -0.61
CLDN11-204ENST00000477531 RCL1Q9Y2P8 373 aaKnown RBP11.27□□□□□ -0.61
CLDN11-204ENST00000477531 FRAS1Q86XX4 4008 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 LOC102723971A0A1B0GUV8 181 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 C7orf66A4D0T2 115 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 K7EPK0 472 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 CNN1P51911 297 aaKnown RBP11.26□□□□□ -0.61
CLDN11-204ENST00000477531 RAB31Q13636 194 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 IGFL4Q6B9Z1 124 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 RNF182Q8N6D2 247 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 ZNF431Q8TF32 576 aaPredicted RBP11.26□□□□□ -0.61
CLDN11-204ENST00000477531 C17orf77Q96MU5 243 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 UHRF2Q96PU4 802 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 NIPSNAP3BQ9BS92 247 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 ARV1Q9H2C2 271 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 PPP1R14DQ9NXH3 145 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 DKK2Q9UBU2 259 aa11.26□□□□□ -0.61
CLDN11-204ENST00000477531 DNAH6Q9C0G6 4158 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 FAM240BA0A1B0GVZ2 78 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 A8MTW9 85 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 CCSO14618 274 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 AGPAT2O15120 278 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 INSP01308 110 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 P0DMU3 169 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 FAM231AP0DMU4 169 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 FAM231CP0DMU5 169 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 PVALBP20472 110 aaPredicted RBP11.25□□□□□ -0.61
CLDN11-204ENST00000477531 B2MP61769 119 aa11.25□□□□□ -0.61
CLDN11-204ENST00000477531 IFITM3Q01628 133 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms