RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 IGKV1D-8A0A087WSZ0 117 aa6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 PINLYPA6NC86 204 aa6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 A8MWL6 223 aa6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 FAM90A5PA8MXJ8 464 aa6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 FOXC1Q12948 553 aa6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 TREML4Q6UXN2 200 aa6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 ZNF295-AS1Q8N0V1 137 aa6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 CIARTQ8N365 385 aaPredicted RBP6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 SLC22A24Q8N4F4 322 aa6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 IGFBPL1Q8WX77 278 aa6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 TAF15Q92804 592 aaKnown RBP eCLIP6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 SNRNP40Q96DI7 357 aaKnown RBP6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 GPX7Q96SL4 187 aaPredicted RBP6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 ZNF331Q9NQX6 463 aaPredicted RBP6.68□□□□□ -1.34
CNTNAP3B-205ENST00000476961 RBAKDNA6NC62 111 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 C9JCJ5 164 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 ZIC3O60481 467 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 RFPL3SP0C7P2 107 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 RPL18Q07020 188 aaKnown RBP6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 SBSPONQ8IVN8 264 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 CEND1Q8N111 149 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 TXNDC17Q9BRA2 123 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 HES7Q9BYE0 225 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 AP5S1Q9NUS5 200 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 F11RQ9Y624 299 aaKnown RBP6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 TMEM14AQ9Y6G1 99 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 CNTRLQ7Z7A1 2325 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 LOC400499M0QZD8 3231 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 SMIM27A0A1W2PRY6 76 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 H3BP45 60 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 PPYP01298 95 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 PMVKQ15126 192 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 OR1C1Q15619 314 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 C12orf74Q32Q52 190 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 PCP2Q8IVA1 136 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 FAM110DQ8TAY7 271 aaPredicted RBP6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 TCF19Q9Y242 345 aa6.67□□□□□ -1.34
CNTNAP3B-205ENST00000476961 IZUMO1RA6ND01 250 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 CD3EP07766 207 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 CTXN1P60606 82 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 C15orf53Q8NAA6 179 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 ODF3Q96PU9 254 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 PYGO1Q9Y3Y4 419 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 FRYQ5TBA9 3013 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 SCO2A0A1W2PP80 73 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 B3GALT5-AS1P59052 145 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 TAL2Q16559 108 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 GDF5OSQ5U4N7 250 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 LHFPL6Q9Y693 200 aa6.66□□□□□ -1.34
CNTNAP3B-205ENST00000476961 A0A1W2PNR3 127 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 A8MZ25 164 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 OVOL1O14753 267 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 NDUFS7O75251 213 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 PDCD6O75340 191 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 CCL11P51671 97 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 RSPO1Q2MKA7 263 aaPredicted RBP6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 DEFB109BQ30KR1 87 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 GAGE2AQ6NT46 116 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 TMEM14EPQ6UXP3 125 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 IL17RELQ6ZVW7 336 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 FAM19A1Q7Z5A9 133 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 C1orf147Q96MC9 270 aaPredicted RBP6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 CHAC1Q9BUX1 264 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 TMEM147Q9BVK8 224 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 OSTCQ9NRP0 149 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 MED12Q93074 2177 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 LAMA5O15230 3695 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 SPTBN4Q9H254 2564 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 NPIPB6E9PJ23 425 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 MS4A18H0YCH9 400 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 LMX1BO60663 402 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 NCR2O95944 276 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 CD7P09564 240 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 HBG1P69891 147 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 HBG2P69892 147 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 ZNF493Q6ZR52 646 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 PIP4P2Q8N4L2 257 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 FDCSPQ8NFU4 85 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 GPHA2Q96T91 129 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 ALKBH4Q9NXW9 302 aa6.65□□□□□ -1.34
CNTNAP3B-205ENST00000476961 TRAV8-2A0A0B4J237 113 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 PCSK4Q6UW60 755 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 ANKRD29Q8N6D5 301 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 C9orf85Q96MD7 179 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 METRNQ9UJH8 293 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 TP53TG1Q9Y2A0 90 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 TRAV8-1A0A0A6YYK1 113 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 C3orf85A0A1B0GTC6 90 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 CRYGAP11844 174 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 COX5AP20674 150 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 C4orf48Q5BLP8 95 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 GOLT1AQ6ZVE7 132 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 DTX2Q86UW9 622 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 ZNF747Q9BV97 191 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 APC2O95996 2303 aa6.64□□□□□ -1.35
CNTNAP3B-205ENST00000476961 TRBV7-7A0A0K0K1E9 115 aa6.63□□□□□ -1.35
CNTNAP3B-205ENST00000476961 A8MWV9 139 aa6.63□□□□□ -1.35
CNTNAP3B-205ENST00000476961 LY6LH3BQJ8 138 aa6.63□□□□□ -1.35
CNTNAP3B-205ENST00000476961 J3QQQ9 107 aa6.63□□□□□ -1.35
CNTNAP3B-205ENST00000476961 FKBP2P26885 142 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms