RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 CBY3A6NI87 242 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 GABARAPH6UMI1 98 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 B3GALNT1O75752 331 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 GABARAPO95166 117 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 AKR1C4P17516 323 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 GPX4P36969 197 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-219ENST00000476625 GALR1P47211 349 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 CCR6P51684 374 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 XGP55808 180 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 OR1B1Q8NGR6 318 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 OR1S1Q8NH92 325 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 Q9H3A6 140 aa8.26□□□□□ -1.09
HDAC6-219ENST00000476625 DISC1C4P0D8 188 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 PRSS46E5RG02 174 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 H3BP45 60 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 CTDSP2O14595 271 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 TSPOP30536 169 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 LINC00315P59091 139 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 RHOBP62745 196 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 CTF1Q16619 201 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 Q5VSD8 79 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 MZT2AQ6P582 158 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 Q6ZRN7 208 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-219ENST00000476625 NOXA1Q86UR1 476 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 BCL7BQ9BQE9 202 aa8.25□□□□□ -1.09
HDAC6-219ENST00000476625 GAGE12BA1L429 117 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 H3BRN7 92 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 J3KRW8 73 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 ZNF701M0R085 212 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-219ENST00000476625 GAGE7O76087 117 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 DUSP14O95147 198 aaKnown RBP8.24□□□□□ -1.09
HDAC6-219ENST00000476625 GAGE12FP0CL80 117 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 GAGE12GP0CL81 117 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 GAGE12IP0CL82 117 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 AKAIN1P0CW23 69 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 DNAH10OSP0CZ25 163 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 MEOX2P50222 304 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 GPR141Q7Z602 305 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 CLVS1Q8IUQ0 354 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-219ENST00000476625 RNASE8Q8TDE3 154 aaKnown RBP8.24□□□□□ -1.09
HDAC6-219ENST00000476625 IL22RA2Q969J5 263 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 GNPNAT1Q96EK6 184 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-219ENST00000476625 MDFICQ9P1T7 246 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 PFDN2Q9UHV9 154 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 VPS13BQ7Z7G8 4022 aa8.24□□□□□ -1.09
HDAC6-219ENST00000476625 MYCBP2O75592 4640 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 A0A0B4J2A0 478 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 PRAC2D3DTV9 90 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 H3BTX0 84 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 PITX3O75364 302 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 CCNKO75909 580 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 SMR3BP02814 79 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-219ENST00000476625 ZNF182P17025 639 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-219ENST00000476625 KRTAP10-1P60331 282 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 SURF2Q15527 256 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-219ENST00000476625 LYPD1Q8N2G4 141 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 OR8A1Q8NGG7 326 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 SMIM4Q8WVI0 70 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 C16orf74Q96GX8 76 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 TMPRSS5Q9H3S3 457 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 SHPKQ9UHJ6 478 aa8.23□□□□□ -1.09
HDAC6-219ENST00000476625 TIMM8BQ9Y5J9 83 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-219ENST00000476625 WRBO00258 174 aa8.22□□□□□ -1.09
HDAC6-219ENST00000476625 RGS5O15539 181 aa8.22□□□□□ -1.09
HDAC6-219ENST00000476625 NOL3O60936 208 aaKnown RBP8.22□□□□□ -1.09
HDAC6-219ENST00000476625 FABP1P07148 127 aa8.22□□□□□ -1.09
HDAC6-219ENST00000476625 CXCL3P19876 107 aa8.22□□□□□ -1.09
HDAC6-219ENST00000476625 TAS2R60P59551 318 aa8.22□□□□□ -1.09
HDAC6-219ENST00000476625 ACOT7LQ6ZUV0 252 aa8.22□□□□□ -1.09
HDAC6-219ENST00000476625 TMEM144Q7Z5S9 345 aa8.22□□□□□ -1.09
HDAC6-219ENST00000476625 RXFP4Q8TDU9 374 aa8.22□□□□□ -1.09
HDAC6-219ENST00000476625 TMEM147Q9BVK8 224 aa8.22□□□□□ -1.09
HDAC6-219ENST00000476625 MRPS16Q9Y3D3 137 aaKnown RBP8.22□□□□□ -1.09
HDAC6-219ENST00000476625 BTF3P20290 206 aaKnown RBP8.21□□□□□ -1.1
HDAC6-219ENST00000476625 M6PRP20645 277 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 TMBIM6P55061 237 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 AKR1C1Q04828 323 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 SPCS2Q15005 226 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 TTC32Q5I0X7 151 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 LINC00612Q8N6U2 182 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 BPIFCQ8NFQ6 507 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 VSIG2Q96IQ7 327 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 UPK3BQ9BT76 320 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 SHANK2-AS3Q9BTD1 123 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 MCUBQ9NWR8 336 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 NDUFA13Q9P0J0 144 aa8.21□□□□□ -1.1
HDAC6-219ENST00000476625 A0A096LPF7 62 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 LINC00854A0A1B0GVQ3 168 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 ANKRD20A5PA0PJZ0 165 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 SMIM18P0DKX4 95 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 RAB11AP62491 216 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 IL18Q14116 193 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 PSG3Q16557 428 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 SPANXN5Q5MJ07 72 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 GFI1BQ5VTD9 330 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 GGNBP1Q5YKI7 109 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 PATE2Q6UY27 113 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 CYP2G1PQ6ZSU1 146 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 Q6ZTI0 123 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 TMED4Q7Z7H5 227 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms