RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 RSPO1Q2MKA7 263 aaPredicted RBP3.32□□□□□ -1.88
CD55-208ENST00000476590 FAM19A1Q7Z5A9 133 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 GJC3Q8NFK1 279 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 MYOZ3Q8TDC0 251 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 FAM168AQ92567 244 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 RND1Q92730 232 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 NPCDR1Q9BY65 106 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 PRRG4Q9BZD6 226 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 TMEM74BQ9NUR3 256 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 TCF19Q9Y242 345 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 A0A0A6YYD5 115 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 A0A1B0GXF2 115 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 MYBPHLA2RUH7 354 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 LINC01619G3V211 115 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 LY6LH3BQJ8 138 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 K7EM74 188 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 K7EQS6 105 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 MGST3O14880 152 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 ZIC3O60481 467 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 CLDN14O95500 239 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 C1orf105O95561 183 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 APOHP02749 345 aaPredicted RBP3.31□□□□□ -1.88
CD55-208ENST00000476590 IAPPP10997 89 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 UBE2D3P61077 147 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 RPS18P62269 152 aaKnown RBP3.31□□□□□ -1.88
CD55-208ENST00000476590 UBE2D2P62837 147 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 SRYQ05066 204 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 EBI3Q14213 229 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 PCSK4Q6UW60 755 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 FAM231DQ6ZW35 169 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 RPS19BP1Q86WX3 136 aaKnown RBP3.31□□□□□ -1.88
CD55-208ENST00000476590 PRIMA1Q86XR5 153 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 POM121L12Q8N7R1 296 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 ZNF441Q8N8Z8 693 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 IL17DQ8TAD2 202 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 PILRAQ9UKJ1 303 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 SCN10AQ9Y5Y9 1956 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 TMSB15BA0A087X1C1 80 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 TRAV13-1A0A0B4J241 112 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 A0A0D9SEW6 157 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 MYMXA0A1B0GTQ4 84 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 H3BVH4 76 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 TIMM23O14925 209 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 SPRY2O43597 315 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 EIF4EBP3O60516 100 aaPredicted RBP3.31□□□□□ -1.88
CD55-208ENST00000476590 NPYP01303 97 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 ARL14EPLP0DKL9 152 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 HLA-DMBP28068 263 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 SSR4P51571 173 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 CACNG7P62955 275 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 HBBP68871 147 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 PRDX1Q06830 199 aaKnown RBP3.31□□□□□ -1.88
CD55-208ENST00000476590 ZNF816Q0VGE8 651 aaPredicted RBP3.31□□□□□ -1.88
CD55-208ENST00000476590 SPANXN5Q5MJ07 72 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 OR5AS1Q8N127 324 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 RPRMLQ8N4K4 120 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 RFESDQ8TAC1 157 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 CNRIP1Q96F85 164 aaPredicted RBP3.31□□□□□ -1.88
CD55-208ENST00000476590 GPHA2Q96T91 129 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 SLC25A2Q9BXI2 301 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 FGF22Q9HCT0 170 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 RETNQ9HD89 108 aa3.31□□□□□ -1.88
CD55-208ENST00000476590 ZNF256Q9Y2P7 627 aaPredicted RBP3.31□□□□□ -1.88
CD55-208ENST00000476590 PCNX3Q9H6A9 2034 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 TRGV11A0A075B6L2 103 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 LOC107984156A0A0G2JMH3 177 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 FAM240AA0A1B0GVK7 77 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 LINC01548A6NM66 108 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 TMEM178BH3BS89 294 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 LTAP01374 205 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 IGKCP01834 107 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 LGALS1P09382 135 aaKnown RBP3.3□□□□□ -1.88
CD55-208ENST00000476590 PLA2G5P39877 138 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 RPL13AP40429 203 aaKnown RBP3.3□□□□□ -1.88
CD55-208ENST00000476590 NXPH1P58417 271 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 TFF3Q07654 80 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 OR1C1Q15619 314 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 C20orf204Q6ZNR8 217 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 DGAT2L6Q6ZPD8 337 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 Q6ZR03 302 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 AAED1Q7RTV5 226 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 ARL17AQ8IVW1 177 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 OR8A1Q8NGG7 326 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 ZNF414Q96IQ9 312 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 FAM19A4Q96LR4 140 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 SPACA5Q96QH8 159 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 HIST1H4GQ99525 98 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 HDHD3Q9BSH5 251 aaPredicted RBP3.3□□□□□ -1.88
CD55-208ENST00000476590 OCIAD1Q9NX40 245 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 TIMM8BQ9Y5J9 83 aaPredicted RBP3.3□□□□□ -1.88
CD55-208ENST00000476590 ATG2BQ96BY7 2078 aa3.3□□□□□ -1.88
CD55-208ENST00000476590 TNS1Q9HBL0 1735 aaKnown RBP3.3□□□□□ -1.88
CD55-208ENST00000476590 K7ESM1 405 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 SLC25A20O43772 301 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 NDUFC2O95298 119 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 GYPEP15421 78 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 PDPNQ86YL7 162 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 LINC01600Q96MT4 127 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 AGPAT4-IT1Q9H0P7 198 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 PLA2G2DQ9UNK4 145 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms