RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 FRMD6-AS1P0C7T7 363 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 MGST1P10620 155 aaKnown RBP12.68□□□□□ -0.38
VARS2-207ENST00000476162 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 ATOH7Q8N100 152 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 MEGF9Q9H1U4 602 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 LOC102724200A0A096LPH7 203 aaPredicted RBP12.68□□□□□ -0.38
VARS2-207ENST00000476162 SNURFLB1AK76 121 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 NBR2O15453 112 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 ZNF324O75467 553 aaPredicted RBP12.68□□□□□ -0.38
VARS2-207ENST00000476162 PMCHP20382 165 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 GPR6P46095 362 aaPredicted RBP12.68□□□□□ -0.38
VARS2-207ENST00000476162 IER3P46695 156 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 FXYD3Q14802 87 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 PMCHL1Q16048 86 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 NHLRC2Q8NBF2 726 aa12.68□□□□□ -0.38
VARS2-207ENST00000476162 I3L2K1 104 aa12.67□□□□□ -0.38
VARS2-207ENST00000476162 IGLC1P0CG04 106 aa12.67□□□□□ -0.38
VARS2-207ENST00000476162 RIPPLY3P57055 190 aa12.67□□□□□ -0.38
VARS2-207ENST00000476162 HES1Q14469 280 aa12.67□□□□□ -0.38
VARS2-207ENST00000476162 OR8I2Q8N0Y5 310 aa12.67□□□□□ -0.38
VARS2-207ENST00000476162 STXBP6Q8NFX7 210 aa12.67□□□□□ -0.38
VARS2-207ENST00000476162 BLNKQ8WV28 456 aa12.67□□□□□ -0.38
VARS2-207ENST00000476162 RCHY1Q96PM5 261 aa12.67□□□□□ -0.38
VARS2-207ENST00000476162 OSTCQ9NRP0 149 aa12.67□□□□□ -0.38
VARS2-207ENST00000476162 ITPR1Q14643 2758 aa12.67□□□□□ -0.38
VARS2-207ENST00000476162 TRBV9A0A0B4J1U6 114 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 GAGE12BA1L429 117 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 PEX7O00628 323 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 ISLRO14498 428 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 TOX4O94842 621 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 ZFP36P26651 326 aaKnown RBP12.66□□□□□ -0.38
VARS2-207ENST00000476162 GNB1LQ9BYB4 327 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 TRAV9-2A0A087WT02 112 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 UQCRFS1P47985 274 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 AMMECR1LQ6DCA0 310 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 VMO1Q7Z5L0 202 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 NPBQ8NG41 125 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 SRSF8Q9BRL6 282 aaKnown RBP12.66□□□□□ -0.38
VARS2-207ENST00000476162 UBTD1Q9HAC8 227 aa12.66□□□□□ -0.38
VARS2-207ENST00000476162 OR2T8A6NH00 312 aa12.65□□□□□ -0.38
VARS2-207ENST00000476162 NDUFA3O95167 84 aa12.65□□□□□ -0.38
VARS2-207ENST00000476162 MYCNOSP40205 109 aa12.65□□□□□ -0.38
VARS2-207ENST00000476162 PLP1P60201 277 aa12.65□□□□□ -0.38
VARS2-207ENST00000476162 GNG5P63218 68 aa12.65□□□□□ -0.38
VARS2-207ENST00000476162 IBA57Q5T440 356 aaKnown RBP12.65□□□□□ -0.38
VARS2-207ENST00000476162 MED13LQ71F56 2210 aa12.65□□□□□ -0.38
VARS2-207ENST00000476162 IGLL1P15814 213 aa12.65□□□□□ -0.38
VARS2-207ENST00000476162 ASPHD1Q5U4P2 390 aa12.65□□□□□ -0.38
VARS2-207ENST00000476162 ASH1LQ9NR48 2969 aaKnown RBP12.64□□□□□ -0.39
VARS2-207ENST00000476162 K7EIM0 57 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 LYZP61626 148 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 LCN12Q6JVE5 192 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 C1orf122Q6ZSJ8 110 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 DYNAPQ8N1N2 210 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 ITLN2Q8WWU7 325 aaPredicted RBP12.64□□□□□ -0.39
VARS2-207ENST00000476162 BORCS7Q96B45 105 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 CLUHP3Q96NS8 147 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 RASL11BQ9BPW5 248 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 SERTAD4Q9NUC0 356 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 PGPA6NDG6 321 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 SPINK4O60575 86 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 GP9P14770 177 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 TCL1AP56279 114 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 MPV17L2Q567V2 206 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 TCF24Q7RTU0 167 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 DEFB125Q8N687 156 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 TSKUQ8WUA8 353 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 EPDR1Q9UM22 224 aa12.64□□□□□ -0.39
VARS2-207ENST00000476162 CSMD1Q96PZ7 3565 aa12.63□□□□□ -0.39
VARS2-207ENST00000476162 H3BTX0 84 aa12.63□□□□□ -0.39
VARS2-207ENST00000476162 IGKV1-17P01599 117 aa12.63□□□□□ -0.39
VARS2-207ENST00000476162 SLC25A5P05141 298 aaKnown RBP12.63□□□□□ -0.39
VARS2-207ENST00000476162 SLC35B1P78383 322 aa12.63□□□□□ -0.39
VARS2-207ENST00000476162 C5orf64Q2M2E5 130 aa12.63□□□□□ -0.39
VARS2-207ENST00000476162 FAM19A2Q8N3H0 131 aa12.63□□□□□ -0.39
VARS2-207ENST00000476162 HIGD1AQ9Y241 93 aa12.63□□□□□ -0.39
VARS2-207ENST00000476162 WNK2Q9Y3S1 2297 aa12.62□□□□□ -0.39
VARS2-207ENST00000476162 SAP30O75446 220 aa12.62□□□□□ -0.39
VARS2-207ENST00000476162 CA1P00915 261 aaPredicted RBP12.62□□□□□ -0.39
VARS2-207ENST00000476162 GNLYP22749 145 aa12.62□□□□□ -0.39
VARS2-207ENST00000476162 CX3CL1P78423 397 aa12.62□□□□□ -0.39
VARS2-207ENST00000476162 KLF17Q5JT82 389 aaPredicted RBP12.62□□□□□ -0.39
VARS2-207ENST00000476162 C19orf84I3L1E1 186 aa12.62□□□□□ -0.39
VARS2-207ENST00000476162 HOXB4P17483 251 aaPredicted RBP12.62□□□□□ -0.39
VARS2-207ENST00000476162 FAM168AQ92567 244 aa12.62□□□□□ -0.39
VARS2-207ENST00000476162 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
VARS2-207ENST00000476162 SMIM27A0A1W2PRY6 76 aa12.61□□□□□ -0.39
VARS2-207ENST00000476162 NCBP2LA6PVI3 153 aaKnown RBP12.61□□□□□ -0.39
VARS2-207ENST00000476162 MT-ND6P03923 174 aa12.61□□□□□ -0.39
VARS2-207ENST00000476162 KIAA1644Q3SXP7 199 aa12.61□□□□□ -0.39
VARS2-207ENST00000476162 CCDC144NLQ6NUI1 221 aa12.61□□□□□ -0.39
VARS2-207ENST00000476162 KIR3DL3Q8N743 410 aa12.61□□□□□ -0.39
VARS2-207ENST00000476162 SLC25A39Q9BZJ4 359 aaPredicted RBP12.61□□□□□ -0.39
VARS2-207ENST00000476162 NAT8BQ9UHF3 227 aa12.61□□□□□ -0.39
VARS2-207ENST00000476162 G3V4G9 280 aa12.61□□□□□ -0.39
VARS2-207ENST00000476162 EFNA4P52798 201 aa12.61□□□□□ -0.39
VARS2-207ENST00000476162 PSG9Q00887 426 aa12.61□□□□□ -0.39
VARS2-207ENST00000476162 BVES-AS1Q5T3Y7 98 aa12.61□□□□□ -0.39
VARS2-207ENST00000476162 SVEP1Q4LDE5 3571 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms