RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 ERVK-16P61578 105 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 GNB1P62873 340 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 MEF2BQ02080 365 aaPredicted RBP3.3□□□□□ -1.88
VPS13D-206ENST00000476045 EGFEM1PQ0D2K5 195 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 GAMTQ14353 236 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 LDLRAD2Q5SZI1 272 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 UTF1Q5T230 341 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 FAM78BQ5VT40 261 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 SPATA31B1PQ5VZV4 182 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 CST9LP1Q5W188 147 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 MIC13Q5XKP0 118 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 CYP2G1PQ6ZSU1 146 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 CENPVQ7Z7K6 275 aaPredicted RBP3.3□□□□□ -1.88
VPS13D-206ENST00000476045 TGIF2LXQ8IUE1 241 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 VKORC1L1Q8N0U8 176 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 DYNAPQ8N1N2 210 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 LINC00311Q8N616 119 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 OR10X1Q8NGY0 326 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 OR2T10Q8NGZ9 312 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 OR1P1Q8NH06 330 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 OR4A16Q8NH70 328 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 TMEM37Q8WXS4 190 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 RITA1Q96K30 269 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 CIB3Q96Q77 187 aaPredicted RBP3.3□□□□□ -1.88
VPS13D-206ENST00000476045 HSD17B10Q99714 261 aaKnown RBP3.3□□□□□ -1.88
VPS13D-206ENST00000476045 AGMATQ9BSE5 352 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 HINT2Q9BX68 163 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 NPCDR1Q9BY65 106 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 HIPK2Q9H2X6 1198 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 SRD5A3Q9H8P0 318 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 MANBALQ9NQG1 85 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 IDI2-AS1Q9NZ38 188 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 WDR83OSQ9Y284 106 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 HILPDAQ9Y5L2 63 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 DNAH7Q8WXX0 4024 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 TRBV24-1A0A075B6N3 115 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 A0A1W2PPQ1 181 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 A0A1W2PPV4 95 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 ZNF705GA8MUZ8 300 aaPredicted RBP3.29□□□□□ -1.88
VPS13D-206ENST00000476045 PPP5D1E7EU14 171 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 F6UZH7 168 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 TMEM250H0YL14 139 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 LY6LH3BQJ8 138 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 J3QR06 171 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 PHOX2AO14813 284 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 NDUFS6O75380 124 aaKnown RBP3.29□□□□□ -1.88
VPS13D-206ENST00000476045 HRASP01112 189 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 AMBPP02760 352 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 CD1BP29016 333 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 DUTP33316 252 aaKnown RBP3.29□□□□□ -1.88
VPS13D-206ENST00000476045 GPX4P36969 197 aaPredicted RBP3.29□□□□□ -1.88
VPS13D-206ENST00000476045 THBS3P49746 956 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 GNG10P50151 68 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 SPCS3P61009 180 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 SUMO2P61956 95 aaKnown RBP3.29□□□□□ -1.88
VPS13D-206ENST00000476045 EBI3Q14213 229 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 HES1Q14469 280 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 PRSS8Q16651 343 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 C17orf58Q2M2W7 97 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 VWC2Q2TAL6 325 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 MORN2Q502X0 79 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 FAM71F2Q6NXP2 309 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 TEX38Q6PEX7 206 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 TCTEX1D1Q8N7M0 179 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 C5orf56Q8N8D9 126 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 ZNF114Q8NC26 417 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 PACRGQ96M98 296 aaPredicted RBP3.29□□□□□ -1.88
VPS13D-206ENST00000476045 S1PR3Q99500 378 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 MGST2Q99735 147 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 HIST1H2BLQ99880 126 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 PYGO2Q9BRQ0 406 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 ENY2Q9NPA8 101 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 TMEM242Q9NWH2 141 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 JPT1Q9UK76 154 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 FUT9Q9Y231 359 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 PXMP4Q9Y6I8 212 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 TNCP24821 2201 aa3.29□□□□□ -1.88
VPS13D-206ENST00000476045 IGHV1-3A0A0C4DH29 117 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 ZNF320A2RRD8 509 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 GATCO43716 136 aaKnown RBP3.28□□□□□ -1.88
VPS13D-206ENST00000476045 YPEL1O60688 119 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 GGCTO75223 188 aaKnown RBP3.28□□□□□ -1.88
VPS13D-206ENST00000476045 MMP23AO75900 390 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 NDUFB4O95168 129 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 HPRT1P00492 218 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 CA2P00918 260 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 IGHG2P01859 326 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 ARL14EPLP0DKL9 152 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 CGB3P0DN86 165 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 CGB7P0DN87 165 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 MYCNOSP40205 109 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 OPRK1P41145 380 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 BLCAPP62952 87 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 HTD2P86397 168 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 CT45A1Q5HYN5 189 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 KCNIP4Q6PIL6 250 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 TMEM183AQ8IXX5 376 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 LYG1Q8N1E2 194 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 Q8N6K4 173 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 TMEM116Q8NCL8 245 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms