RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	CDKN1B	P46527	198 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	RPS10	P46783	165 aa	Known RBP	2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	CMC4	P56277	68 aa	Predicted RBP	2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	KRTAP10-10	P60014	251 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	PTGES3	Q15185	160 aa	Known RBP	2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	VMA21	Q3ZAQ7	101 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	COA6	Q5JTJ3	125 aa	Known RBP	2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	SPANXN2	Q5MJ10	180 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	LINC00173	Q6ZV60	143 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	CAMK2N1	Q7Z7J9	78 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	OR51G1	Q8NGK1	321 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	PTX4	Q96A99	478 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	CPNE2	Q96FN4	548 aa	Predicted RBP	2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	OR2A7	Q96R45	310 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	PDCD1LG2	Q9BQ51	273 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	RHPN1-AS1	Q9BWJ2	59 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	GABARAPL3	Q9BY60	117 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	BANF2	Q9H503	90 aa		2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	F11R	Q9Y624	299 aa	Known RBP	2.74	□□□□□ -1.97
PRKD3-208	ENST00000475912	LPA	P08519	4548 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912		A0A0B4J2A0	478 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	IGKV1-6	A0A0C4DH72	117 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	ZNF705F	A8MVS1	300 aa	Predicted RBP	2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912		F6UB75	175 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912		K7EMT4	169 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	MRPS12	O15235	138 aa	Known RBP	2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	PDCD6	O75340	191 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	CRYZL1	O95825	349 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	NAPSA	O96009	420 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	ZNF705D	P0CH99	300 aa	Predicted RBP	2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	ZNF705B	P0CI00	300 aa	Predicted RBP	2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	CDK10	Q15131	360 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	USF2	Q15853	346 aa	Predicted RBP	2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	C12orf73	Q69YU5	71 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	ZNF880	Q6PDB4	577 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	ZNF705A	Q6ZN79	300 aa	Predicted RBP	2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	SSX7	Q7RTT5	188 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	GID4	Q8IVV7	300 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	VKORC1L1	Q8N0U8	176 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	OR4C5	Q8NGB2	326 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	OR10R2	Q8NGX6	335 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	ANP32B	Q92688	251 aa	Known RBP	2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	S100A13	Q99584	98 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	MS4A6A	Q9H2W1	248 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	TMEM138	Q9NPI0	162 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	FGFR1OP2	Q9NVK5	253 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	SDHAF2	Q9NX18	166 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	ABRACL	Q9P1F3	81 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	SHPK	Q9UHJ6	478 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	LRRC42	Q9Y546	428 aa		2.73	□□□□□ -1.97
PRKD3-208	ENST00000475912	IGHV3-21	A0A0B4J1V1	117 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	TMEM212	A6NML5	194 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912		J3QLW9	94 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912		J3QRE1	110 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	NUPL2	O15504	423 aa	Known RBP	2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	GLA	P06280	429 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	RPSA	P08865	295 aa	Known RBP	2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	CD3G	P09693	182 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	MT1HL1	P0DM35	61 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	DEFA4	P12838	97 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	HIST1H1B	P16401	226 aa	Known RBP	2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	RPL27A	P46776	148 aa	Known RBP	2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	NMU	P48645	174 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	CCL18	P55774	89 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	RTL8B	Q17RB0	113 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	TTC32	Q5I0X7	151 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	ACTL10	Q5JWF8	245 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	TMEM69	Q5SWH9	247 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	UBE2U	Q5VVX9	321 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	GLIPR1L1	Q6UWM5	242 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	TCF24	Q7RTU0	167 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	C6orf201	Q7Z4U5	140 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	OR4A4P	Q8NGN8	299 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	OR5AK2	Q8NH90	309 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	OR10C1	Q96KK4	312 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	HDHD3	Q9BSH5	251 aa	Predicted RBP	2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	FAAP24	Q9BTP7	215 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	THTPA	Q9BU02	230 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	OR2D2	Q9H210	308 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	GEMIN7	Q9H840	131 aa	Known RBP	2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912	ZNF586	Q9NXT0	402 aa		2.72	□□□□□ -1.97
PRKD3-208	ENST00000475912		A0A087WTM6	91 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	TRAV14DV4	A0A0A6YYC5	116 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	TRBV6-6	A0A0A6YYG2	114 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	IGHV3-66	A0A0C4DH42	116 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	SERTM2	A0A1B0GWG4	89 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	IGLC7	A0M8Q6	106 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	DAPL1	A0PJW8	107 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	TMEM189	A5PLL7	270 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	DNASE2	O00115	360 aa	Predicted RBP	2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	CREBL2	O60519	120 aa	Predicted RBP	2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	CRTAP	O75718	401 aa	Predicted RBP	2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	DHFR	P00374	187 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	CTSG	P08311	255 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	ZNF688	P0C7X2	276 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	ANXA8	P13928	327 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	IGFBP3	P17936	291 aa	Predicted RBP	2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	HRH1	P35367	487 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	CXCL5	P42830	114 aa		2.71	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms