RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 C20orf24Q9BUV8 137 aa9.45□□□□□ -0.9
MRPL55-227ENST00000475832 TMEM14CQ9P0S9 112 aa9.45□□□□□ -0.9
MRPL55-227ENST00000475832 MGAM2Q2M2H8 2515 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 IGHV3-35A0A0C4DH35 117 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 ZNF98A6NK75 572 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 C11orf94C9JXX5 98 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 F6UZH7 168 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 OR10J4P0C629 311 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 UBE2G2P60604 165 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 SRSF3P84103 164 aaKnown RBP9.44□□□□□ -0.9
MRPL55-227ENST00000475832 KHDC1LQ5JSQ8 128 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 LCNL1Q6ZST4 164 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 MYOZ3Q8TDC0 251 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 GRAMD2BQ96HH9 432 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 FAM167A-AS1Q96KT0 104 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 OR5B12Q96R08 314 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 SCRT1Q9BWW7 348 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 SEC11CQ9BY50 192 aa9.44□□□□□ -0.9
MRPL55-227ENST00000475832 A0A1W2PRE2 83 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 A0A1W2PS18 150 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 ZNF320A2RRD8 509 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 TMEM250H0YL14 139 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 HIST1H1EP10412 219 aaKnown RBP9.43□□□□□ -0.9
MRPL55-227ENST00000475832 CDX1P47902 265 aaPredicted RBP9.43□□□□□ -0.9
MRPL55-227ENST00000475832 CEBPGP53567 150 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 RPEL1Q2QD12 228 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 SOHLH1Q5JUK2 328 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 C1orf194Q5T5A4 169 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 C12orf54Q6X4T0 127 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 OR8I2Q8N0Y5 310 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 UFC1Q9Y3C8 167 aa9.43□□□□□ -0.9
MRPL55-227ENST00000475832 A0A1B0GUS0 222 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 SRP19P09132 144 aaKnown RBP9.42□□□□□ -0.9
MRPL55-227ENST00000475832 NBEAP1P0C6P0 100 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 PYYP10082 97 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 ATF4P18848 351 aaPredicted RBP9.42□□□□□ -0.9
MRPL55-227ENST00000475832 GALR1P47211 349 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 MORN5Q5VZ52 161 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 LEMD1Q68G75 181 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 C10orf99Q6UWK7 81 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 GPHB5Q86YW7 130 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 LINC01006Q8NI28 216 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 DPF1Q92782 380 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 TCEAL7Q9BRU2 100 aa9.42□□□□□ -0.9
MRPL55-227ENST00000475832 CLPSL1A2RUU4 121 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 FAM74A7A6NL05 159 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 TRBV12-3P01733 135 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 GP9P14770 177 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 MEOX2P50222 304 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 KIAA0141Q14154 515 aaPredicted RBP9.41□□□□□ -0.9
MRPL55-227ENST00000475832 FAM74A3Q4VXF1 159 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 BLNKQ8WV28 456 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 C4orf3Q8WVX3 66 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 RPUSD4Q96CM3 377 aaKnown RBP9.41□□□□□ -0.9
MRPL55-227ENST00000475832 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 LINC00052Q96N35 136 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 ELOVL1Q9BW60 279 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 RNF114Q9Y508 228 aa9.41□□□□□ -0.9
MRPL55-227ENST00000475832 ZNF785A8K8V0 405 aa9.4□□□□□ -0.9
MRPL55-227ENST00000475832 K7EMT4 169 aa9.4□□□□□ -0.9
MRPL55-227ENST00000475832 APOC3P02656 99 aa9.4□□□□□ -0.9
MRPL55-227ENST00000475832 CRYBB3P26998 211 aa9.4□□□□□ -0.9
MRPL55-227ENST00000475832 CD81P60033 236 aa9.4□□□□□ -0.9
MRPL55-227ENST00000475832 PSG9Q00887 426 aa9.4□□□□□ -0.9
MRPL55-227ENST00000475832 LYPD1Q8N2G4 141 aa9.4□□□□□ -0.9
MRPL55-227ENST00000475832 SVBPQ8N300 66 aa9.4□□□□□ -0.9
MRPL55-227ENST00000475832 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.4□□□□□ -0.9
MRPL55-227ENST00000475832 CYB561D1Q8N8Q1 229 aa9.4□□□□□ -0.9
MRPL55-227ENST00000475832 DAZ1Q9NQZ3 744 aaKnown RBP9.4□□□□□ -0.9
MRPL55-227ENST00000475832 CARHSP1Q9Y2V2 147 aaKnown RBP9.4□□□□□ -0.9
MRPL55-227ENST00000475832 YTHDF2Q9Y5A9 579 aaKnown RBP9.4□□□□□ -0.9
MRPL55-227ENST00000475832 TSSC4Q9Y5U2 329 aaPredicted RBP9.4□□□□□ -0.9
MRPL55-227ENST00000475832 IGHV3OR16-8A0A075B7F1 116 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 LINC01619G3V211 115 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 M0QZ24 198 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 BUB3O43684 328 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 ATP5G3P48201 142 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 RANP62826 216 aaKnown RBP9.39□□□□□ -0.91
MRPL55-227ENST00000475832 PDE6HQ13956 83 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 HIST2H2BDQ6DRA6 164 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 KLHL30-AS1Q8NEE0 82 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 CMTM2Q8TAZ6 248 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 NIPSNAP3BQ9BS92 247 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 AAMDCQ9H7C9 122 aa9.39□□□□□ -0.91
MRPL55-227ENST00000475832 TRBV19A0A075B6N1 114 aa9.38□□□□□ -0.91
MRPL55-227ENST00000475832 HELTA6NFD8 242 aa9.38□□□□□ -0.91
MRPL55-227ENST00000475832 ZNF727A8MUV8 499 aa9.38□□□□□ -0.91
MRPL55-227ENST00000475832 C9JQL5 133 aa9.38□□□□□ -0.91
MRPL55-227ENST00000475832 LGALS9O00182 355 aa9.38□□□□□ -0.91
MRPL55-227ENST00000475832 ZNF207O43670 478 aaKnown RBP9.38□□□□□ -0.91
MRPL55-227ENST00000475832 SNAPINO95295 136 aa9.38□□□□□ -0.91
MRPL55-227ENST00000475832 SUMO1P63165 101 aaKnown RBP9.38□□□□□ -0.91
MRPL55-227ENST00000475832 C10orf91Q5T1B1 145 aa9.38□□□□□ -0.91
MRPL55-227ENST00000475832 REC114Q7Z4M0 266 aa9.38□□□□□ -0.91
MRPL55-227ENST00000475832 C1QL4Q86Z23 238 aa9.38□□□□□ -0.91
MRPL55-227ENST00000475832 OR1N2Q8NGR9 330 aa9.38□□□□□ -0.91
MRPL55-227ENST00000475832 OTORQ9NRC9 128 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms