RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 BAP18Q8IXM2 172 aa8.72□□□□□ -1.01
CCDC57-208ENST00000475635 RNF182Q8N6D2 247 aa8.72□□□□□ -1.01
CCDC57-208ENST00000475635 OR4D5Q8NGN0 318 aa8.72□□□□□ -1.01
CCDC57-208ENST00000475635 ZNRF2Q8NHG8 242 aa8.72□□□□□ -1.01
CCDC57-208ENST00000475635 TRAV8-2A0A0B4J237 113 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 PLAC8L1A1L4L8 177 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 PRSS46E5RG02 174 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 MED6O75586 246 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 NUDT3O95989 172 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 B2MP61769 119 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 FGL1Q08830 312 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 FCN2Q15485 313 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 TMEM182Q6ZP80 229 aaPredicted RBP8.71□□□□□ -1.02
CCDC57-208ENST00000475635 GPR141Q7Z602 305 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 TMED4Q7Z7H5 227 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 C6orf223Q8N319 242 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 BPIFCQ8NFQ6 507 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 GPR82Q96P67 336 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 CIB3Q96Q77 187 aaPredicted RBP8.71□□□□□ -1.02
CCDC57-208ENST00000475635 TMEM147Q9BVK8 224 aa8.71□□□□□ -1.02
CCDC57-208ENST00000475635 RSL24D1Q9UHA3 163 aaKnown RBP8.71□□□□□ -1.02
CCDC57-208ENST00000475635 APOBP04114 4563 aaKnown RBP8.71□□□□□ -1.02
CCDC57-208ENST00000475635 TRAV12-2A0A075B6T6 113 aa8.7□□□□□ -1.02
CCDC57-208ENST00000475635 SLC25A6P12236 298 aa8.7□□□□□ -1.02
CCDC57-208ENST00000475635 AZU1P20160 251 aa8.7□□□□□ -1.02
CCDC57-208ENST00000475635 TSPOP30536 169 aa8.7□□□□□ -1.02
CCDC57-208ENST00000475635 S100A7P31151 101 aa8.7□□□□□ -1.02
CCDC57-208ENST00000475635 RPP30P78346 268 aaKnown RBP8.7□□□□□ -1.02
CCDC57-208ENST00000475635 AKR1C1Q04828 323 aa8.7□□□□□ -1.02
CCDC57-208ENST00000475635 MAPKAPK5-AS1Q8N8E1 139 aa8.7□□□□□ -1.02
CCDC57-208ENST00000475635 ZNF738Q8NE65 137 aa8.7□□□□□ -1.02
CCDC57-208ENST00000475635 SLC25A39Q9BZJ4 359 aaPredicted RBP8.7□□□□□ -1.02
CCDC57-208ENST00000475635 BOLA2-SMG1P6H3BVE0 249 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 WRBO00258 174 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 SYNGR2O43760 224 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 ATP5G1P05496 136 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 VAMP1P23763 118 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 ATP5G3P48201 142 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 CCL18P55774 89 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 TMEM128Q5BJH2 165 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 SPANXN5Q5MJ07 72 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 LRTM2Q8N967 370 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 DYNC2LI1Q8TCX1 351 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 LINC01587Q99440 93 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 CCDC59Q9P031 241 aaKnown RBP8.69□□□□□ -1.02
CCDC57-208ENST00000475635 LINC00588Q9Y4M8 146 aa8.69□□□□□ -1.02
CCDC57-208ENST00000475635 CBY3A6NI87 242 aa8.68□□□□□ -1.02
CCDC57-208ENST00000475635 H3BP45 60 aa8.68□□□□□ -1.02
CCDC57-208ENST00000475635 H3BRN7 92 aa8.68□□□□□ -1.02
CCDC57-208ENST00000475635 RHOBP62745 196 aa8.68□□□□□ -1.02
CCDC57-208ENST00000475635 HIST1H1AQ02539 215 aaPredicted RBP8.68□□□□□ -1.02
CCDC57-208ENST00000475635 ACOT7LQ6ZUV0 252 aa8.68□□□□□ -1.02
CCDC57-208ENST00000475635 TMEM256Q8N2U0 113 aa8.68□□□□□ -1.02
CCDC57-208ENST00000475635 MRPS26Q9BYN8 205 aaKnown RBP8.68□□□□□ -1.02
CCDC57-208ENST00000475635 DNAH5Q8TE73 4624 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 FABP12A6NFH5 140 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 HTN1P15515 57 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 RPL7P18124 248 aaKnown RBP8.67□□□□□ -1.02
CCDC57-208ENST00000475635 FAUP35544 74 aaKnown RBP8.67□□□□□ -1.02
CCDC57-208ENST00000475635 TAS2R60P59551 318 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 CLINT1Q14677 625 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 TMEM144Q7Z5S9 345 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 OR8A1Q8NGG7 326 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 RAB2BQ8WUD1 216 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 RNF141Q8WVD5 230 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 C16orf74Q96GX8 76 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 SOSTQ9BQB4 213 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 SHANK2-AS3Q9BTD1 123 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 PPP1R14DQ9NXH3 145 aa8.67□□□□□ -1.02
CCDC57-208ENST00000475635 SMCO3A2RU48 225 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 HYPMO75409 117 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 SFT2D2O95562 160 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 IL5P05113 134 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 HOXB5P09067 269 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 PRB4P10163 310 aaPredicted RBP8.66□□□□□ -1.02
CCDC57-208ENST00000475635 CXCL3P19876 107 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 TNFSF8P32971 234 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 RAP2BP61225 183 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 PPP1R1AQ13522 171 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 CYP2G1PQ6ZSU1 146 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 SSX7Q7RTT5 188 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 HIGD1AQ9Y241 93 aa8.66□□□□□ -1.02
CCDC57-208ENST00000475635 STRAPQ9Y3F4 350 aaKnown RBP8.66□□□□□ -1.02
CCDC57-208ENST00000475635 TIMM8BQ9Y5J9 83 aaPredicted RBP8.66□□□□□ -1.02
CCDC57-208ENST00000475635 A0A087X0K7 114 aa8.65□□□□□ -1.02
CCDC57-208ENST00000475635 OR5G3P0C626 314 aa8.65□□□□□ -1.02
CCDC57-208ENST00000475635 LINC00869P0C866 280 aa8.65□□□□□ -1.02
CCDC57-208ENST00000475635 PSG3Q16557 428 aa8.65□□□□□ -1.02
CCDC57-208ENST00000475635 SPATA12Q7Z6I5 190 aa8.65□□□□□ -1.02
CCDC57-208ENST00000475635 TOMM5Q8N4H5 51 aa8.65□□□□□ -1.02
CCDC57-208ENST00000475635 TRIM63Q969Q1 353 aa8.65□□□□□ -1.02
CCDC57-208ENST00000475635 UHRF2Q96PU4 802 aa8.65□□□□□ -1.02
CCDC57-208ENST00000475635 SLIRPQ9GZT3 109 aaKnown RBP8.65□□□□□ -1.02
CCDC57-208ENST00000475635 Q9H8V8 135 aa8.65□□□□□ -1.02
CCDC57-208ENST00000475635 NOP10Q9NPE3 64 aaKnown RBP8.65□□□□□ -1.02
CCDC57-208ENST00000475635 CDKN1BP46527 198 aa8.64□□□□□ -1.03
CCDC57-208ENST00000475635 TMBIM6P55061 237 aa8.64□□□□□ -1.03
CCDC57-208ENST00000475635 AP3S2P59780 193 aa8.64□□□□□ -1.03
CCDC57-208ENST00000475635 PLP1P60201 277 aa8.64□□□□□ -1.03
CCDC57-208ENST00000475635 Q8N1X5 172 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms