RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 CMTM2Q8TAZ6 248 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 ZNF502Q8TBZ5 544 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 SGK494Q96LW2 274 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 CHRDL1Q9BU40 450 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 KLF12Q9Y4X4 402 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 FAM208BQ5VWN6 2430 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 TRBV19A0A075B6N1 114 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 H3BUX3 64 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 AMY1AP04745 511 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 GPR183P32249 361 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 LY6EQ16553 131 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 C9orf152Q5JTZ5 239 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 EXOC3-AS1Q8N2X6 119 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 LINC01356Q8N9X3 169 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 MS4A10Q96PG2 267 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 AVPP01185 164 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 IGLC2P0DOY2 106 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 FMC1Q96HJ9 113 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 TRAPPC1Q9Y5R8 145 aa11.99□□□□□ -0.49
RPUSD3-215ENST00000475470 TRAV41A0A0B4J266 112 aa11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 ZNF705GA8MUZ8 300 aaPredicted RBP11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 CLEC3BP05452 202 aa11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 FABP4P15090 132 aa11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 COL8A1P27658 744 aa11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 ADMP35318 185 aa11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 C17orf77Q96MU5 243 aa11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 RPL15P61313 204 aaKnown RBP11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 OR8I2Q8N0Y5 310 aa11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 GPR82Q96P67 336 aa11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 RABAC1Q9UI14 185 aa11.98□□□□□ -0.49
RPUSD3-215ENST00000475470 EPG5Q9HCE0 2579 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 IGHV3-35A0A0C4DH35 117 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 EEF1AKMT3Q96AZ1 226 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 SMIM12Q96EX1 92 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 A6NDX4 124 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 BMPR1BO00238 502 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 MRPS12O15235 138 aaKnown RBP11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 PRR27Q6MZM9 219 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 LYPD1Q8N2G4 141 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 ZNF414Q96IQ9 312 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 GNB4Q9HAV0 340 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 LINC00527Q9UJ94 153 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 PITPNC1Q9UKF7 332 aa11.97□□□□□ -0.49
RPUSD3-215ENST00000475470 S100A7P31151 101 aa11.96□□□□□ -0.49
RPUSD3-215ENST00000475470 KRTAP10-9P60411 292 aa11.96□□□□□ -0.49
RPUSD3-215ENST00000475470 CLEC19AQ6UXS0 136 aa11.96□□□□□ -0.49
RPUSD3-215ENST00000475470 FAM231DQ6ZW35 169 aa11.96□□□□□ -0.49
RPUSD3-215ENST00000475470 TMEM190Q8WZ59 177 aa11.96□□□□□ -0.49
RPUSD3-215ENST00000475470 A0A096LNT2 108 aa11.96□□□□□ -0.5
RPUSD3-215ENST00000475470 TRBV7-1A0A0A6YYK4 115 aa11.96□□□□□ -0.5
RPUSD3-215ENST00000475470 GATCO43716 136 aaKnown RBP11.96□□□□□ -0.5
RPUSD3-215ENST00000475470 RPL19P84098 196 aaKnown RBP11.96□□□□□ -0.5
RPUSD3-215ENST00000475470 GOLT1AQ6ZVE7 132 aa11.96□□□□□ -0.5
RPUSD3-215ENST00000475470 LRRK2Q5S007 2527 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 TGFAP01135 160 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 LTAP01374 205 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 CRIP2P52943 208 aaPredicted RBP11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 TCL1AP56279 114 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 ATP5G2Q06055 141 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 SIGLEC15Q6ZMC9 328 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 MAPK1IP1LQ8NDC0 245 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 NUDT10Q8NFP7 164 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 NUDT11Q96G61 164 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 CCDC140Q96MF4 163 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 IGHV3OR16-8A0A075B7F1 116 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 M0QZK8 103 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 RPL7P18124 248 aaKnown RBP11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 C19orf54Q5BKX5 351 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 TOMM20LQ6UXN7 152 aa11.95□□□□□ -0.5
RPUSD3-215ENST00000475470 SMIM27A0A1W2PRY6 76 aa11.94□□□□□ -0.5
RPUSD3-215ENST00000475470 CA1P00915 261 aaPredicted RBP11.94□□□□□ -0.5
RPUSD3-215ENST00000475470 PDE6HQ13956 83 aa11.94□□□□□ -0.5
RPUSD3-215ENST00000475470 MLST8Q9BVC4 326 aa11.94□□□□□ -0.5
RPUSD3-215ENST00000475470 CELSR2Q9HCU4 2923 aa11.94□□□□□ -0.5
RPUSD3-215ENST00000475470 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
RPUSD3-215ENST00000475470 SPINK4O60575 86 aa11.94□□□□□ -0.5
RPUSD3-215ENST00000475470 IGF1P05019 195 aa11.94□□□□□ -0.5
RPUSD3-215ENST00000475470 AAMDCQ9H7C9 122 aa11.94□□□□□ -0.5
RPUSD3-215ENST00000475470 BEX4Q9NWD9 120 aaPredicted RBP11.94□□□□□ -0.5
RPUSD3-215ENST00000475470 TRAV8-1A0A0A6YYK1 113 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 FAM223BA6NKX1 122 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 J3QLI3 93 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 K7EQM0 130 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 CBLN1P23435 193 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 IER3P46695 156 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 LOXL1Q08397 574 aaPredicted RBP11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 PRNTQ86SH4 94 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 Q86TA4 180 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 FAM223AQ8IWN6 122 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 GRAMD2BQ96HH9 432 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 CELSR1Q9NYQ6 3014 aa11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 ANKRD17O75179 2603 aaKnown RBP11.93□□□□□ -0.5
RPUSD3-215ENST00000475470 IGHG2P01859 326 aa11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 TRGV3P03979 118 aa11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 SLC35B1P78383 322 aa11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 DEFB113Q30KQ7 82 aa11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 PACRGQ96M98 296 aaPredicted RBP11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 HIST1H2BLQ99880 126 aa11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 ZFAND3Q9H8U3 227 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms