RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 FAM74A3Q4VXF1 159 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 Q71RC1 249 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-210ENST00000475329 KLHDC1Q8N7A1 406 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 BLNKQ8WV28 456 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 C11orf52Q96A22 123 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 RPUSD4Q96CM3 377 aaKnown RBP10.58□□□□□ -0.72
TRAF4-210ENST00000475329 SMIM7Q9BQ49 75 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 NIPSNAP3BQ9BS92 247 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 SCO2A0A1W2PP80 73 aa10.57□□□□□ -0.72
TRAF4-210ENST00000475329 CLPSL1A2RUU4 121 aa10.57□□□□□ -0.72
TRAF4-210ENST00000475329 ZNF727A8MUV8 499 aa10.57□□□□□ -0.72
TRAF4-210ENST00000475329 LGALS1P09382 135 aaKnown RBP10.57□□□□□ -0.72
TRAF4-210ENST00000475329 RPL7P18124 248 aaKnown RBP10.57□□□□□ -0.72
TRAF4-210ENST00000475329 UBE2E2Q96LR5 201 aa10.57□□□□□ -0.72
TRAF4-210ENST00000475329 OR5B12Q96R08 314 aa10.57□□□□□ -0.72
TRAF4-210ENST00000475329 TCEAL7Q9BRU2 100 aa10.57□□□□□ -0.72
TRAF4-210ENST00000475329 C20orf24Q9BUV8 137 aa10.57□□□□□ -0.72
TRAF4-210ENST00000475329 PARLQ9H300 379 aa10.57□□□□□ -0.72
TRAF4-210ENST00000475329 ANK3Q12955 4377 aaKnown RBP10.56□□□□□ -0.72
TRAF4-210ENST00000475329 H3BQ15 152 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 M0R036 132 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 MRPS12O15235 138 aaKnown RBP10.56□□□□□ -0.72
TRAF4-210ENST00000475329 IGLC2P0DOY2 106 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 NPPCP23582 126 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 SUMO1P63165 101 aaKnown RBP10.56□□□□□ -0.72
TRAF4-210ENST00000475329 ZNF674Q2M3X9 581 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 OR8I2Q8N0Y5 310 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 CLRN3Q8NCR9 226 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 TMEM190Q8WZ59 177 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 TVP23CQ96ET8 276 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 GPR82Q96P67 336 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 C16orf95Q9H693 158 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 ZNF586Q9NXT0 402 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 F8P00451 2351 aa10.56□□□□□ -0.72
TRAF4-210ENST00000475329 ZNF207O43670 478 aaKnown RBP10.55□□□□□ -0.72
TRAF4-210ENST00000475329 SCO1O75880 301 aa10.55□□□□□ -0.72
TRAF4-210ENST00000475329 NDUFB4O95168 129 aa10.55□□□□□ -0.72
TRAF4-210ENST00000475329 SNRPCP09234 159 aaKnown RBP10.55□□□□□ -0.72
TRAF4-210ENST00000475329 CRYBB3P26998 211 aa10.55□□□□□ -0.72
TRAF4-210ENST00000475329 RANP62826 216 aaKnown RBP10.55□□□□□ -0.72
TRAF4-210ENST00000475329 AWAT1Q58HT5 328 aa10.55□□□□□ -0.72
TRAF4-210ENST00000475329 C1orf194Q5T5A4 169 aa10.55□□□□□ -0.72
TRAF4-210ENST00000475329 ATRAIDQ6UW56 229 aa10.55□□□□□ -0.72
TRAF4-210ENST00000475329 ELOVL1Q9BW60 279 aa10.55□□□□□ -0.72
TRAF4-210ENST00000475329 OTORQ9NRC9 128 aa10.55□□□□□ -0.72
TRAF4-210ENST00000475329 NAT8Q9UHE5 227 aa10.55□□□□□ -0.72
TRAF4-210ENST00000475329 U3KQE9 123 aa10.55□□□□□ -0.72
TRAF4-210ENST00000475329 TRBV19A0A075B6N1 114 aa10.54□□□□□ -0.72
TRAF4-210ENST00000475329 H3BTX0 84 aa10.54□□□□□ -0.72
TRAF4-210ENST00000475329 BUB3O43684 328 aa10.54□□□□□ -0.72
TRAF4-210ENST00000475329 NDUFA7O95182 113 aa10.54□□□□□ -0.72
TRAF4-210ENST00000475329 ATF4P18848 351 aaPredicted RBP10.54□□□□□ -0.72
TRAF4-210ENST00000475329 MYCNOSP40205 109 aa10.54□□□□□ -0.72
TRAF4-210ENST00000475329 PNRC1Q12796 327 aaPredicted RBP10.54□□□□□ -0.72
TRAF4-210ENST00000475329 FAM106AQ4KMX7 169 aa10.54□□□□□ -0.72
TRAF4-210ENST00000475329 UNQ9165/PRO28630Q6UXU0 137 aa10.54□□□□□ -0.72
TRAF4-210ENST00000475329 Q9H3A6 140 aa10.54□□□□□ -0.72
TRAF4-210ENST00000475329 ZNF320A2RRD8 509 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 TCF21O43680 179 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 SLC25A5P05141 298 aaKnown RBP10.53□□□□□ -0.72
TRAF4-210ENST00000475329 GALR1P47211 349 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 PDE6HQ13956 83 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 RHEBQ15382 184 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 TMEM241Q24JQ0 296 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 RPEL1Q2QD12 228 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 GPHB5Q86YW7 130 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 LYPD1Q8N2G4 141 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 C5orf17Q8NAS9 161 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 GRAMD2BQ96HH9 432 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 DERL1Q9BUN8 251 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 SDF2L1Q9HCN8 221 aa10.53□□□□□ -0.72
TRAF4-210ENST00000475329 A0A087X0K7 114 aa10.52□□□□□ -0.73
TRAF4-210ENST00000475329 PGPA6NDG6 321 aa10.52□□□□□ -0.73
TRAF4-210ENST00000475329 PEX7O00628 323 aa10.52□□□□□ -0.73
TRAF4-210ENST00000475329 CRLF1O75462 422 aa10.52□□□□□ -0.73
TRAF4-210ENST00000475329 AKR1C3P42330 323 aa10.52□□□□□ -0.73
TRAF4-210ENST00000475329 CDX1P47902 265 aaPredicted RBP10.52□□□□□ -0.73
TRAF4-210ENST00000475329 KHDC1LQ5JSQ8 128 aa10.52□□□□□ -0.73
TRAF4-210ENST00000475329 C2CD4CQ8TF44 421 aa10.52□□□□□ -0.73
TRAF4-210ENST00000475329 WIPF2Q8TF74 440 aaPredicted RBP10.52□□□□□ -0.73
TRAF4-210ENST00000475329 C4orf3Q8WVX3 66 aa10.52□□□□□ -0.73
TRAF4-210ENST00000475329 HIST1H2BAQ96A08 127 aa10.52□□□□□ -0.73
TRAF4-210ENST00000475329 IGHV4OR15-8A0A075B7B6 117 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 A0A087WW49 117 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 IGHV3-49A0A0A0MS15 119 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 IGHV3-66A0A0C4DH42 116 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 A0A1W2PS18 150 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 C7orf77A4D0Y5 90 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 B4DEV8 164 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 K7EMT4 169 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 ZNF253O75346 499 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 APOHP02749 345 aaPredicted RBP10.51□□□□□ -0.73
TRAF4-210ENST00000475329 RPL35P42766 123 aaKnown RBP10.51□□□□□ -0.73
TRAF4-210ENST00000475329 CNN1P51911 297 aaKnown RBP10.51□□□□□ -0.73
TRAF4-210ENST00000475329 PSG9Q00887 426 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 ADIRFQ15847 76 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 TCTEX1D4Q5JR98 221 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 C16orf54Q6UWD8 224 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 SIGLEC15Q6ZMC9 328 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 LINC01006Q8NI28 216 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms