RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 TMEM167AQ8TBQ9 72 aa10.95□□□□□ -0.66
SEMA4D-217ENST00000475255 F11RQ9Y624 299 aaKnown RBP10.95□□□□□ -0.66
SEMA4D-217ENST00000475255 ARHGAP32A7KAX9 2087 aa10.95□□□□□ -0.66
SEMA4D-217ENST00000475255 FBLL1A6NHQ2 334 aaKnown RBP10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 LTAP01374 205 aa10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 GP9P14770 177 aa10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 SUB1P53999 127 aaKnown RBP eCLIP10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 NEU4Q8WWR8 484 aaPredicted RBP10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 KLF12Q9Y4X4 402 aa10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 ZNF785A8K8V0 405 aa10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 HLA-DRB1P01911 266 aa10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 LIPFP07098 398 aa10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 RHOGP84095 191 aa10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 NHLH1Q02575 133 aa10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 CHCHD1Q96BP2 118 aaKnown RBP10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 ANKRD11Q6UB99 2663 aaPredicted RBP10.94□□□□□ -0.66
SEMA4D-217ENST00000475255 C2orf91Q6ZV80 131 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 LINC00312Q9Y6C7 94 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 RELNP78509 3460 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 IGLV3-9A0A075B6K5 115 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 GOSR1O95249 250 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 FA2HQ7L5A8 372 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 Q86TA4 180 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 M0R3E3 92 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 RBP4P02753 201 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 IFI27P40305 119 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 AP5S1Q9NUS5 200 aa10.93□□□□□ -0.66
SEMA4D-217ENST00000475255 TNFRSF1AP19438 455 aa10.92□□□□□ -0.66
SEMA4D-217ENST00000475255 MRGPRG-AS1Q2M3A8 158 aa10.92□□□□□ -0.66
SEMA4D-217ENST00000475255 ZADH2Q8N4Q0 377 aa10.92□□□□□ -0.66
SEMA4D-217ENST00000475255 TRAV17A0A0B4J275 112 aa10.92□□□□□ -0.66
SEMA4D-217ENST00000475255 TIMM23BQ5SRD1 257 aa10.92□□□□□ -0.66
SEMA4D-217ENST00000475255 FMC1Q96HJ9 113 aa10.92□□□□□ -0.66
SEMA4D-217ENST00000475255 K7ERU9 68 aa10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 GATA4P43694 442 aa10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 NMUP48645 174 aa10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 ATP5IP56385 69 aaPredicted RBP10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 THYN1Q9P016 225 aa10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 AKAP13Q12802 2813 aa10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 TM4SF5O14894 197 aa10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 IGLV2-11P01706 119 aa10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 BCL6BQ8N143 479 aaPredicted RBP10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 FAM215AQ9Y5M1 114 aa10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 DCHS2Q6V1P9 2916 aa10.91□□□□□ -0.66
SEMA4D-217ENST00000475255 TMEM213A2RRL7 107 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 SMKR1H3BMG3 65 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 K7EMI3 77 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 HIST1H1AQ02539 215 aaPredicted RBP10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 PET117Q6UWS5 81 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 JMJD8Q96S16 334 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 ZNF747Q9BV97 191 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 PEF1Q9UBV8 284 aaKnown RBP10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 HSPB8Q9UJY1 196 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 A0A1B0GUT8 65 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 VMA21Q3ZAQ7 101 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 TMEM97Q5BJF2 176 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 NDFIP1Q9BT67 221 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 PRO3102Q9H379 93 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 SPTA1P02549 2419 aa10.9□□□□□ -0.66
SEMA4D-217ENST00000475255 CD5LO43866 347 aa10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 ZNF883P0CG24 379 aa10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 CD40P25942 277 aa10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 RPL27AP46776 148 aaKnown RBP10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 STXBP6Q8NFX7 210 aa10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 VSTM2AQ8TAG5 236 aa10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 C8orf49Q96NF6 230 aa10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 LINC00574Q9H8X3 128 aa10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 ASH1LQ9NR48 2969 aaKnown RBP10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 CTSZQ9UBR2 303 aa10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 HIGD1AQ9Y241 93 aa10.9□□□□□ -0.67
SEMA4D-217ENST00000475255 LINC01545Q5VT33 79 aa10.89□□□□□ -0.67
SEMA4D-217ENST00000475255 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
SEMA4D-217ENST00000475255 C18orf15Q96N68 181 aa10.89□□□□□ -0.67
SEMA4D-217ENST00000475255 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
SEMA4D-217ENST00000475255 FBXL15Q9H469 300 aa10.89□□□□□ -0.67
SEMA4D-217ENST00000475255 OVOL3O00110 214 aa10.89□□□□□ -0.67
SEMA4D-217ENST00000475255 FAM162BQ5T6X4 162 aa10.89□□□□□ -0.67
SEMA4D-217ENST00000475255 SLC25A39Q9BZJ4 359 aaPredicted RBP10.89□□□□□ -0.67
SEMA4D-217ENST00000475255 NCOR1P1Q9H4R4 102 aa10.89□□□□□ -0.67
SEMA4D-217ENST00000475255 RABAC1Q9UI14 185 aa10.89□□□□□ -0.67
SEMA4D-217ENST00000475255 SPAARA0A1B0GVQ0 90 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 D6R8Y8 96 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 COX8AP10176 69 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 CRIP1P50238 77 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 CACNG7P62955 275 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 KLF17Q5JT82 389 aaPredicted RBP10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 AMN1Q8IY45 258 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 ZNF492Q9P255 531 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 SPTBN1Q01082 2364 aaKnown RBP10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 PPBPP02775 128 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 RPL24P83731 157 aaKnown RBP10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 PRSS33Q8NF86 280 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 C8orf46Q8TAG6 207 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 TTTY13Q9BZ97 58 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 TMEM133Q9H2Q1 129 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 OTOGLQ3ZCN5 2332 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 A0A096LNJ9 63 aa10.88□□□□□ -0.67
SEMA4D-217ENST00000475255 ZNF207O43670 478 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms