RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 LYRM9A8MSI8 78 aa17.54■□□□□ 0.4
TMEM54-205ENST00000475208 CRXO43186 299 aaPredicted RBP17.54■□□□□ 0.4
TMEM54-205ENST00000475208 DUSP14O95147 198 aaKnown RBP17.54■□□□□ 0.4
TMEM54-205ENST00000475208 ORM2P19652 201 aa17.54■□□□□ 0.4
TMEM54-205ENST00000475208 TMED4Q7Z7H5 227 aa17.54■□□□□ 0.4
TMEM54-205ENST00000475208 BPIFCQ8NFQ6 507 aa17.54■□□□□ 0.4
TMEM54-205ENST00000475208 OR1B1Q8NGR6 318 aa17.54■□□□□ 0.4
TMEM54-205ENST00000475208 PRSS46E5RG02 174 aa17.53■□□□□ 0.4
TMEM54-205ENST00000475208 MED6O75586 246 aa17.53■□□□□ 0.4
TMEM54-205ENST00000475208 GATA2P23769 480 aaPredicted RBP17.53■□□□□ 0.4
TMEM54-205ENST00000475208 IGFL4Q6B9Z1 124 aa17.53■□□□□ 0.4
TMEM54-205ENST00000475208 OR4D5Q8NGN0 318 aa17.53■□□□□ 0.4
TMEM54-205ENST00000475208 TMEM147Q9BVK8 224 aa17.53■□□□□ 0.4
TMEM54-205ENST00000475208 DEFB130BP0DP73 79 aa17.52■□□□□ 0.4
TMEM54-205ENST00000475208 DEFB130AP0DP74 79 aa17.52■□□□□ 0.4
TMEM54-205ENST00000475208 SLC25A6P12236 298 aa17.52■□□□□ 0.4
TMEM54-205ENST00000475208 TMEM182Q6ZP80 229 aaPredicted RBP17.52■□□□□ 0.4
TMEM54-205ENST00000475208 BAP18Q8IXM2 172 aa17.52■□□□□ 0.4
TMEM54-205ENST00000475208 GPR82Q96P67 336 aa17.52■□□□□ 0.4
TMEM54-205ENST00000475208 CIB3Q96Q77 187 aaPredicted RBP17.52■□□□□ 0.4
TMEM54-205ENST00000475208 TRAV8-2A0A0B4J237 113 aa17.51■□□□□ 0.39
TMEM54-205ENST00000475208 VAMP1P23763 118 aa17.51■□□□□ 0.39
TMEM54-205ENST00000475208 RPP30P78346 268 aaKnown RBP17.51■□□□□ 0.39
TMEM54-205ENST00000475208 TNP2Q05952 138 aa17.51■□□□□ 0.39
TMEM54-205ENST00000475208 RNF182Q8N6D2 247 aa17.51■□□□□ 0.39
TMEM54-205ENST00000475208 C16orf90A8MZG2 172 aa17.5■□□□□ 0.39
TMEM54-205ENST00000475208 WRBO00258 174 aa17.5■□□□□ 0.39
TMEM54-205ENST00000475208 S100A7P31151 101 aa17.5■□□□□ 0.39
TMEM54-205ENST00000475208 B2MP61769 119 aa17.5■□□□□ 0.39
TMEM54-205ENST00000475208 AKR1C1Q04828 323 aa17.5■□□□□ 0.39
TMEM54-205ENST00000475208 FGL1Q08830 312 aa17.5■□□□□ 0.39
TMEM54-205ENST00000475208 TMEM128Q5BJH2 165 aa17.5■□□□□ 0.39
TMEM54-205ENST00000475208 LRTM2Q8N967 370 aa17.5■□□□□ 0.39
TMEM54-205ENST00000475208 NBDYA0A0U1RRE5 68 aa17.49■□□□□ 0.39
TMEM54-205ENST00000475208 F5H768 121 aa17.49■□□□□ 0.39
TMEM54-205ENST00000475208 SYNGR2O43760 224 aa17.49■□□□□ 0.39
TMEM54-205ENST00000475208 NUDT3O95989 172 aa17.49■□□□□ 0.39
TMEM54-205ENST00000475208 TSPOP30536 169 aa17.49■□□□□ 0.39
TMEM54-205ENST00000475208 FAUP35544 74 aaKnown RBP17.49■□□□□ 0.39
TMEM54-205ENST00000475208 ZNRF2Q8NHG8 242 aa17.49■□□□□ 0.39
TMEM54-205ENST00000475208 TRAV12-2A0A075B6T6 113 aa17.48■□□□□ 0.39
TMEM54-205ENST00000475208 PLAC8L1A1L4L8 177 aa17.48■□□□□ 0.39
TMEM54-205ENST00000475208 BOLA2-SMG1P6H3BVE0 249 aa17.48■□□□□ 0.39
TMEM54-205ENST00000475208 AZU1P20160 251 aa17.48■□□□□ 0.39
TMEM54-205ENST00000475208 FCN2Q15485 313 aa17.48■□□□□ 0.39
TMEM54-205ENST00000475208 SPANXN5Q5MJ07 72 aa17.48■□□□□ 0.39
TMEM54-205ENST00000475208 ZNF738Q8NE65 137 aa17.48■□□□□ 0.39
TMEM54-205ENST00000475208 SLC25A39Q9BZJ4 359 aaPredicted RBP17.48■□□□□ 0.39
TMEM54-205ENST00000475208 RBM38Q9H0Z9 239 aaKnown RBP17.48■□□□□ 0.39
TMEM54-205ENST00000475208 LRP1BQ9NZR2 4599 aa17.48■□□□□ 0.39
TMEM54-205ENST00000475208 H3BP45 60 aa17.47■□□□□ 0.39
TMEM54-205ENST00000475208 H3BRN7 92 aa17.47■□□□□ 0.39
TMEM54-205ENST00000475208 ACOT7LQ6ZUV0 252 aa17.47■□□□□ 0.39
TMEM54-205ENST00000475208 C6orf223Q8N319 242 aa17.47■□□□□ 0.39
TMEM54-205ENST00000475208 V9GYH0 126 aa17.47■□□□□ 0.39
TMEM54-205ENST00000475208 CCDC160A6NGH7 325 aa17.46■□□□□ 0.39
TMEM54-205ENST00000475208 TRIM63Q969Q1 353 aa17.46■□□□□ 0.39
TMEM54-205ENST00000475208 ATP5G1P05496 136 aa17.45■□□□□ 0.38
TMEM54-205ENST00000475208 ATP5G3P48201 142 aa17.45■□□□□ 0.38
TMEM54-205ENST00000475208 PYDC2Q56P42 97 aa17.45■□□□□ 0.38
TMEM54-205ENST00000475208 SHANK2-AS3Q9BTD1 123 aa17.45■□□□□ 0.38
TMEM54-205ENST00000475208 STRAPQ9Y3F4 350 aaKnown RBP17.45■□□□□ 0.38
TMEM54-205ENST00000475208 SFT2D2O95562 160 aa17.44■□□□□ 0.38
TMEM54-205ENST00000475208 HOXB5P09067 269 aa17.44■□□□□ 0.38
TMEM54-205ENST00000475208 RPL7P18124 248 aaKnown RBP17.44■□□□□ 0.38
TMEM54-205ENST00000475208 RAP2BP61225 183 aa17.44■□□□□ 0.38
TMEM54-205ENST00000475208 RHOBP62745 196 aa17.44■□□□□ 0.38
TMEM54-205ENST00000475208 HIST1H1AQ02539 215 aaPredicted RBP17.44■□□□□ 0.38
TMEM54-205ENST00000475208 PPP1R1AQ13522 171 aa17.44■□□□□ 0.38
TMEM54-205ENST00000475208 CYP2G1PQ6ZSU1 146 aa17.44■□□□□ 0.38
TMEM54-205ENST00000475208 TMEM144Q7Z5S9 345 aa17.44■□□□□ 0.38
TMEM54-205ENST00000475208 LINC01587Q99440 93 aa17.44■□□□□ 0.38
TMEM54-205ENST00000475208 HIGD1AQ9Y241 93 aa17.44■□□□□ 0.38
TMEM54-205ENST00000475208 SMCO3A2RU48 225 aa17.43■□□□□ 0.38
TMEM54-205ENST00000475208 CDK2AP2O75956 126 aa17.43■□□□□ 0.38
TMEM54-205ENST00000475208 IL5P05113 134 aa17.43■□□□□ 0.38
TMEM54-205ENST00000475208 CCL18P55774 89 aa17.43■□□□□ 0.38
TMEM54-205ENST00000475208 AP3S2P59780 193 aa17.43■□□□□ 0.38
TMEM54-205ENST00000475208 CCDC190Q86UF4 302 aa17.43■□□□□ 0.38
TMEM54-205ENST00000475208 TOMM5Q8N4H5 51 aa17.43■□□□□ 0.38
TMEM54-205ENST00000475208 OR8A1Q8NGG7 326 aa17.43■□□□□ 0.38
TMEM54-205ENST00000475208 CBY3A6NI87 242 aa17.42■□□□□ 0.38
TMEM54-205ENST00000475208 ZNF701M0R085 212 aaPredicted RBP17.42■□□□□ 0.38
TMEM54-205ENST00000475208 S100A5P33763 92 aa17.42■□□□□ 0.38
TMEM54-205ENST00000475208 TAS2R60P59551 318 aa17.42■□□□□ 0.38
TMEM54-205ENST00000475208 TMEM256Q8N2U0 113 aa17.42■□□□□ 0.38
TMEM54-205ENST00000475208 RNF141Q8WVD5 230 aa17.42■□□□□ 0.38
TMEM54-205ENST00000475208 SLC25A21Q9BQT8 299 aaPredicted RBP17.42■□□□□ 0.38
TMEM54-205ENST00000475208 PPP1R14DQ9NXH3 145 aa17.42■□□□□ 0.38
TMEM54-205ENST00000475208 LINC00588Q9Y4M8 146 aa17.42■□□□□ 0.38
TMEM54-205ENST00000475208 HYPMO75409 117 aa17.41■□□□□ 0.38
TMEM54-205ENST00000475208 CXCL3P19876 107 aa17.41■□□□□ 0.38
TMEM54-205ENST00000475208 C16orf74Q96GX8 76 aa17.41■□□□□ 0.38
TMEM54-205ENST00000475208 OR5G3P0C626 314 aa17.4■□□□□ 0.38
TMEM54-205ENST00000475208 LINC00869P0C866 280 aa17.4■□□□□ 0.38
TMEM54-205ENST00000475208 HTN1P15515 57 aa17.4■□□□□ 0.38
TMEM54-205ENST00000475208 MAPKAPK5-AS1Q8N8E1 139 aa17.4■□□□□ 0.38
TMEM54-205ENST00000475208 UHRF2Q96PU4 802 aa17.4■□□□□ 0.38
TMEM54-205ENST00000475208 A0A087X0K7 114 aa17.39■□□□□ 0.37
TMEM54-205ENST00000475208 PRB4P10163 310 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms