RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 TMEM41BQ5BJD5 291 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 C1orf194Q5T5A4 169 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 FAM78BQ5VT40 261 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 FAM90A2PQ658T7 463 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 EIF5AL1Q6IS14 154 aaKnown RBP7.56□□□□□ -1.2
COL8A1-206ENST00000474648 FAM122CQ6P4D5 195 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 SSX7Q7RTT5 188 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 GLMPQ8WWB7 406 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 PHYHIPLQ96FC7 376 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 RNF2Q99496 336 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 FUT9Q9Y231 359 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 SMAD5-AS1Q9Y6J3 95 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 NOTCH3Q9UM47 2321 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 A0A1W2PS18 150 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 UMAD1C9J7I0 102 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 SULT1A2P50226 295 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 RHOBP62745 196 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 IFITM2Q01629 132 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 FAM74A1Q5RGS3 127 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 PRR31Q5SQ13 230 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 AKR1C8PQ5T2L2 129 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 TEX261Q6UWH6 196 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 ALKAL2Q6UX46 152 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 RAB24Q969Q5 203 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 SLC25A2Q9BXI2 301 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 MRPL32Q9BYC8 188 aaKnown RBP7.55□□□□□ -1.2
COL8A1-206ENST00000474648 PFDN2Q9UHV9 154 aa7.55□□□□□ -1.2
COL8A1-206ENST00000474648 SAP30O75446 220 aa7.54□□□□□ -1.2
COL8A1-206ENST00000474648 IGLV1-51P01701 117 aa7.54□□□□□ -1.2
COL8A1-206ENST00000474648 IGLL1P15814 213 aa7.54□□□□□ -1.2
COL8A1-206ENST00000474648 S100A7AQ86SG5 101 aa7.54□□□□□ -1.2
COL8A1-206ENST00000474648 OR8I2Q8N0Y5 310 aa7.54□□□□□ -1.2
COL8A1-206ENST00000474648 ZNF680Q8NEM1 530 aa7.54□□□□□ -1.2
COL8A1-206ENST00000474648 MBD3L1Q8WWY6 194 aa7.54□□□□□ -1.2
COL8A1-206ENST00000474648 ZNF503Q96F45 646 aa7.54□□□□□ -1.2
COL8A1-206ENST00000474648 NARS2Q96I59 477 aaKnown RBP7.54□□□□□ -1.2
COL8A1-206ENST00000474648 ACTR3CQ9C0K3 210 aaPredicted RBP7.54□□□□□ -1.2
COL8A1-206ENST00000474648 SLC25A22Q9H936 323 aa7.54□□□□□ -1.2
COL8A1-206ENST00000474648 A0A1W2PPV4 95 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 IZUMO1RA6ND01 250 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 HMGB3O15347 200 aaKnown RBP7.53□□□□□ -1.2
COL8A1-206ENST00000474648 GHRHP01286 108 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 STAG3L2P0CL84 134 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 STAG3L3P0CL85 134 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 GP9P14770 177 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 S100A7P31151 101 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 CDC34P49427 236 aaPredicted RBP7.53□□□□□ -1.2
COL8A1-206ENST00000474648 RAB5CP51148 216 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 CD300EQ496F6 205 aaPredicted RBP7.53□□□□□ -1.2
COL8A1-206ENST00000474648 C9orf66Q5T8R8 295 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 DPPA3Q6W0C5 159 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 TCF24Q7RTU0 167 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 GRAMD2BQ96HH9 432 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 MCRIP2Q9BUT9 160 aaKnown RBP7.53□□□□□ -1.2
COL8A1-206ENST00000474648 TMEM231Q9H6L2 316 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 TMEM14CQ9P0S9 112 aa7.53□□□□□ -1.2
COL8A1-206ENST00000474648 MGAM2Q2M2H8 2515 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 DNAH3Q8TD57 4116 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 CTXND1A0A1B0GTU2 59 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 ZNF785A8K8V0 405 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 H3BQ15 152 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 SNRPCP09234 159 aaKnown RBP7.52□□□□□ -1.21
COL8A1-206ENST00000474648 IGLC2P0DOY2 106 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 PYYP10082 97 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 RPL7P18124 248 aaKnown RBP7.52□□□□□ -1.21
COL8A1-206ENST00000474648 BMI1P35226 326 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 INSL3P51460 131 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 LCN15Q6UWW0 184 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 SIGLEC15Q6ZMC9 328 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 BPIFA4PQ86YQ2 179 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 TMEM61Q8N0U2 210 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 FAM213BQ8TBF2 198 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 DYNLRB2Q8TF09 96 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 RNF141Q8WVD5 230 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 FXYD5Q96DB9 178 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 GPR82Q96P67 336 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 OR51M1Q9H341 326 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 RNF24Q9Y225 148 aa7.52□□□□□ -1.21
COL8A1-206ENST00000474648 A0A087X0K7 114 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 TRAV25A0A0B4J276 109 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 HELTA6NFD8 242 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 TSPAN4O14817 238 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 CD5P06127 495 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 HIST1H1EP10412 219 aaKnown RBP7.51□□□□□ -1.21
COL8A1-206ENST00000474648 GALR1P47211 349 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 TAS2R45P59539 299 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 STXBP6Q8NFX7 210 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 OR2K2Q8NGT1 345 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 SUN5Q8TC36 379 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 PAXXQ9BUH6 204 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 TMPRSS5Q9H3S3 457 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 ZNF586Q9NXT0 402 aa7.51□□□□□ -1.21
COL8A1-206ENST00000474648 TRAV1-1A0A0B4J248 108 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 MAP1LC3B2A6NCE7 125 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 ZNF705EA8MWA4 302 aaPredicted RBP7.5□□□□□ -1.21
COL8A1-206ENST00000474648 H3BTX0 84 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 SOCS3O14543 225 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 NDUFB4O95168 129 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 CXorf1O96002 111 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms