RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 NRN1Q9NPD7 142 aa11.74□□□□□ -0.53
COL1A1-204ENST00000474644 UBQLN2Q9UHD9 624 aa11.74□□□□□ -0.53
COL1A1-204ENST00000474644 OR11H12B2RN74 326 aa11.73□□□□□ -0.53
COL1A1-204ENST00000474644 GCSAMLQ5JQS6 135 aa11.73□□□□□ -0.53
COL1A1-204ENST00000474644 MORN5Q5VZ52 161 aa11.73□□□□□ -0.53
COL1A1-204ENST00000474644 AKAP14Q86UN6 197 aa11.73□□□□□ -0.53
COL1A1-204ENST00000474644 DEFB125Q8N687 156 aa11.73□□□□□ -0.53
COL1A1-204ENST00000474644 MFFQ9GZY8 342 aa11.73□□□□□ -0.53
COL1A1-204ENST00000474644 MAP6D1Q9H9H5 199 aa11.73□□□□□ -0.53
COL1A1-204ENST00000474644 DNAJC4Q9NNZ3 241 aa11.73□□□□□ -0.53
COL1A1-204ENST00000474644 HMSDA8MTL9 139 aa11.72□□□□□ -0.53
COL1A1-204ENST00000474644 GALR1P47211 349 aa11.72□□□□□ -0.53
COL1A1-204ENST00000474644 ZNF345Q14585 488 aa11.72□□□□□ -0.53
COL1A1-204ENST00000474644 GATAD1Q8WUU5 269 aa11.72□□□□□ -0.53
COL1A1-204ENST00000474644 FAM110AQ9BQ89 295 aa11.72□□□□□ -0.53
COL1A1-204ENST00000474644 A8MZ25 164 aa11.71□□□□□ -0.53
COL1A1-204ENST00000474644 FRMD6-AS1P0C7T7 363 aa11.71□□□□□ -0.53
COL1A1-204ENST00000474644 RPL7P18124 248 aaKnown RBP11.71□□□□□ -0.53
COL1A1-204ENST00000474644 RPL7L1Q6DKI1 246 aaKnown RBP11.71□□□□□ -0.53
COL1A1-204ENST00000474644 HSD17B11Q8NBQ5 300 aa11.71□□□□□ -0.53
COL1A1-204ENST00000474644 C17orf77Q96MU5 243 aa11.71□□□□□ -0.53
COL1A1-204ENST00000474644 SRD5A3Q9H8P0 318 aa11.71□□□□□ -0.53
COL1A1-204ENST00000474644 RNF24Q9Y225 148 aa11.71□□□□□ -0.53
COL1A1-204ENST00000474644 TIMM9Q9Y5J7 89 aa11.71□□□□□ -0.53
COL1A1-204ENST00000474644 RFNGQ9Y644 331 aa11.71□□□□□ -0.53
COL1A1-204ENST00000474644 SOCS3O14543 225 aa11.7□□□□□ -0.54
COL1A1-204ENST00000474644 MRPS12O15235 138 aaKnown RBP11.7□□□□□ -0.54
COL1A1-204ENST00000474644 ZNF688P0C7X2 276 aa11.7□□□□□ -0.54
COL1A1-204ENST00000474644 FFAR4Q5NUL3 377 aa11.7□□□□□ -0.54
COL1A1-204ENST00000474644 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.7□□□□□ -0.54
COL1A1-204ENST00000474644 KCNRGQ8N5I3 272 aa11.7□□□□□ -0.54
COL1A1-204ENST00000474644 CITED4Q96RK1 184 aa11.7□□□□□ -0.54
COL1A1-204ENST00000474644 BORCS7-ASMTA0A0B4J1R7 106 aa11.69□□□□□ -0.54
COL1A1-204ENST00000474644 TRAV5A0A0B4J249 113 aa11.69□□□□□ -0.54
COL1A1-204ENST00000474644 TAAR5O14804 337 aa11.69□□□□□ -0.54
COL1A1-204ENST00000474644 ATF4P18848 351 aaPredicted RBP11.69□□□□□ -0.54
COL1A1-204ENST00000474644 CXCL2P19875 107 aa11.69□□□□□ -0.54
COL1A1-204ENST00000474644 MEOX2P50222 304 aa11.69□□□□□ -0.54
COL1A1-204ENST00000474644 CMC4P56277 68 aaPredicted RBP11.69□□□□□ -0.54
COL1A1-204ENST00000474644 ZNF124Q15973 351 aa11.69□□□□□ -0.54
COL1A1-204ENST00000474644 SPATA31B1PQ5VZV4 182 aa11.69□□□□□ -0.54
COL1A1-204ENST00000474644 APRG1Q8IVJ8 170 aa11.69□□□□□ -0.54
COL1A1-204ENST00000474644 TUBA4BQ9H853 241 aa11.69□□□□□ -0.54
COL1A1-204ENST00000474644 SEPSECSQ9HD40 501 aaKnown RBP11.69□□□□□ -0.54
COL1A1-204ENST00000474644 CYTL1Q9NRR1 136 aa11.69□□□□□ -0.54
COL1A1-204ENST00000474644 A0A087X0K7 114 aa11.68□□□□□ -0.54
COL1A1-204ENST00000474644 ATP6V0CP27449 155 aa11.68□□□□□ -0.54
COL1A1-204ENST00000474644 DEFB131AP59861 70 aa11.68□□□□□ -0.54
COL1A1-204ENST00000474644 CD300CQ08708 224 aa11.68□□□□□ -0.54
COL1A1-204ENST00000474644 FAM78BQ5VT40 261 aa11.68□□□□□ -0.54
COL1A1-204ENST00000474644 BPIFA4PQ86YQ2 179 aa11.68□□□□□ -0.54
COL1A1-204ENST00000474644 B9D2Q9BPU9 175 aa11.68□□□□□ -0.54
COL1A1-204ENST00000474644 ARPC5LQ9BPX5 153 aa11.68□□□□□ -0.54
COL1A1-204ENST00000474644 PSMG3Q9BT73 122 aaPredicted RBP11.68□□□□□ -0.54
COL1A1-204ENST00000474644 MRPL32Q9BYC8 188 aaKnown RBP11.68□□□□□ -0.54
COL1A1-204ENST00000474644 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
COL1A1-204ENST00000474644 C1QBP02746 253 aa11.67□□□□□ -0.54
COL1A1-204ENST00000474644 PSMB3P49720 205 aa11.67□□□□□ -0.54
COL1A1-204ENST00000474644 SNRPD3P62318 126 aaKnown RBP11.67□□□□□ -0.54
COL1A1-204ENST00000474644 PSMG4Q5JS54 123 aa11.67□□□□□ -0.54
COL1A1-204ENST00000474644 SAMD13Q5VXD3 122 aa11.67□□□□□ -0.54
COL1A1-204ENST00000474644 MIR17HGQ75NE6 70 aa11.67□□□□□ -0.54
COL1A1-204ENST00000474644 OR2G3Q8NGZ4 309 aa11.67□□□□□ -0.54
COL1A1-204ENST00000474644 FUT9Q9Y231 359 aa11.67□□□□□ -0.54
COL1A1-204ENST00000474644 A0A0D9SG52 128 aa11.66□□□□□ -0.54
COL1A1-204ENST00000474644 RBMY1BA6NDE4 496 aaKnown RBP11.66□□□□□ -0.54
COL1A1-204ENST00000474644 RBMY1EA6NEQ0 496 aaKnown RBP11.66□□□□□ -0.54
COL1A1-204ENST00000474644 ISLRO14498 428 aa11.66□□□□□ -0.54
COL1A1-204ENST00000474644 BCL2L11O43521 198 aa11.66□□□□□ -0.54
COL1A1-204ENST00000474644 JTBO76095 146 aa11.66□□□□□ -0.54
COL1A1-204ENST00000474644 RBMY1DP0C7P1 496 aaKnown RBP11.66□□□□□ -0.54
COL1A1-204ENST00000474644 IGLC2P0DOY2 106 aa11.66□□□□□ -0.54
COL1A1-204ENST00000474644 ID1P41134 155 aa11.66□□□□□ -0.54
COL1A1-204ENST00000474644 RAB2AP61019 212 aa11.66□□□□□ -0.54
COL1A1-204ENST00000474644 LINC00322Q6ZN03 302 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-204ENST00000474644 GNPNAT1Q96EK6 184 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-204ENST00000474644 C16orf92Q96LL3 132 aa11.66□□□□□ -0.54
COL1A1-204ENST00000474644 SLC25A2Q9BXI2 301 aa11.66□□□□□ -0.54
COL1A1-204ENST00000474644 TRAV8-2A0A0B4J237 113 aa11.65□□□□□ -0.54
COL1A1-204ENST00000474644 SNRPCP09234 159 aaKnown RBP11.65□□□□□ -0.54
COL1A1-204ENST00000474644 M6PRP20645 277 aa11.65□□□□□ -0.54
COL1A1-204ENST00000474644 ACOT6Q3I5F7 207 aaPredicted RBP11.65□□□□□ -0.54
COL1A1-204ENST00000474644 FAM167A-AS1Q96KT0 104 aa11.65□□□□□ -0.54
COL1A1-204ENST00000474644 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.54
COL1A1-204ENST00000474644 KANTRA0A1W2PQU2 76 aa11.64□□□□□ -0.55
COL1A1-204ENST00000474644 H3BQ15 152 aa11.64□□□□□ -0.55
COL1A1-204ENST00000474644 H3BTX0 84 aa11.64□□□□□ -0.55
COL1A1-204ENST00000474644 PYYP10082 97 aa11.64□□□□□ -0.55
COL1A1-204ENST00000474644 RHOBP62745 196 aa11.64□□□□□ -0.55
COL1A1-204ENST00000474644 LCN15Q6UWW0 184 aa11.64□□□□□ -0.55
COL1A1-204ENST00000474644 TMUB2Q71RG4 321 aa11.64□□□□□ -0.55
COL1A1-204ENST00000474644 SBSPONQ8IVN8 264 aa11.64□□□□□ -0.55
COL1A1-204ENST00000474644 ASCL2Q99929 193 aa11.64□□□□□ -0.55
COL1A1-204ENST00000474644 HRH4Q9H3N8 390 aa11.64□□□□□ -0.55
COL1A1-204ENST00000474644 LOC102724200A0A096LPH7 203 aaPredicted RBP11.63□□□□□ -0.55
COL1A1-204ENST00000474644 KNCNA6PVL3 124 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 SLC17A3O00476 420 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 PFDN1O60925 122 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 SERF2P84101 59 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 IGFL4Q6B9Z1 124 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms