RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 THBS3P49746 956 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 RANP62826 216 aaKnown RBP3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 RAB31Q13636 194 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 LDLRAD2Q5SZI1 272 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 C12orf54Q6X4T0 127 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 ZNF738Q8NE65 137 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 OR10W1Q8NGF6 305 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 OR4C13Q8NGP0 309 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 SGMS2Q8NHU3 365 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 PIFOQ8TCI5 191 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 SFRP2Q96HF1 295 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 DUX5Q96PT3 197 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 C1RLQ9NZP8 487 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 TP53TG3Q9ULZ0 132 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 RNF114Q9Y508 228 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 SELENOKQ9Y6D0 94 aa3.31□□□□□ -1.88
GAPVD1-216ENST00000474637 IGKV1OR2-108A0A075B7D4 117 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 IGHV1-3A0A0C4DH29 117 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 A0A1W2PPI3 338 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 PRSS47A8MTI9 375 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 DIRC3C9JPN6 131 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 E7EUB6 86 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 F6UZH7 168 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 UPK2O00526 184 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 LINC00869P0C866 280 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 CRISP2P16562 243 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 GCHFRP30047 84 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 REG1BP48304 166 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 RHOBP62745 196 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 SRSF2Q01130 221 aaKnown RBP3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 EBI3Q14213 229 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 VAMP3Q15836 100 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 LY6EQ16553 131 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 ZNF833PQ6ZTB9 187 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 SMIM15Q7Z3B0 74 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 MRPL52Q86TS9 123 aaKnown RBP3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 ST6GALNAC6Q969X2 333 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 ADTRPQ96IZ2 230 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 MDFIQ99750 246 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 TXNDC17Q9BRA2 123 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 SLC35D1Q9NTN3 355 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 PRNDQ9UKY0 176 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 ZFHX3Q15911 3703 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 CLPSL1A2RUU4 121 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 K7EP13 123 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 SLC17A3O00476 420 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 TIMM23O14925 209 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 SPINK4O60575 86 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 HYPMO75409 117 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 MOSP00540 346 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 TYMSP04818 313 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 FRMD6-AS1P0C7T7 363 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 PMCHP20382 165 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 LINC00310P59036 64 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 DIAPH2-AS1Q14236 149 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 PSG5Q15238 335 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 RTL8BQ17RB0 113 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 FBLN7Q53RD9 439 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 MIR17HGQ75NE6 70 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 TMEM144Q7Z5S9 345 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 OR2T6Q8NHC8 308 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 ORAOV1Q8WV07 137 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 CFHR4Q92496 578 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 NABP2Q9BQ15 211 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 SLC25A33Q9BSK2 321 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 PRSS22Q9GZN4 317 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 PLEKHA3Q9HB20 300 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 FBXL7Q9UJT9 491 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 SLC45A2Q9UMX9 530 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 MOB4Q9Y3A3 225 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 COX11Q9Y6N1 276 aa3.3□□□□□ -1.88
GAPVD1-216ENST00000474637 HELTA6NFD8 242 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 TMEM238C9JI98 176 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 K7EN84 100 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 MT-CO2P00403 227 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 OR10J4P0C629 311 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 SAA1P0DJI8 122 aaPredicted RBP3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 CRYBB3P26998 211 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 MC5RP33032 325 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 PAFAH1B2P68402 229 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 RPL19P84098 196 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 PRCDQ00LT1 54 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 HES1Q14469 280 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 POU2AF1Q16633 256 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 Q6ZSV7 163 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 Q8N2B8 174 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 OR10G8Q8NGN5 311 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 FLYWCH2Q96CP2 140 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 NUDT11Q96G61 164 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 RNF5Q99942 180 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 ZNF747Q9BV97 191 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 MRPL20Q9BYC9 149 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 CSTL1Q9H114 145 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 UQCR10Q9UDW1 63 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 ZNF257Q9Y2Q1 563 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 FCN1O00602 326 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 LCE2BO14633 110 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 OR7C2O60412 319 aa3.29□□□□□ -1.88
GAPVD1-216ENST00000474637 IGHV3-48P01763 117 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms