RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 GLRXP35754 106 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 FOXG1P55316 489 aaPredicted RBP6.49□□□□□ -1.37
CCDC93-208ENST00000474546 SLC35B1P78383 322 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 PSG9Q00887 426 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 GUSBP1Q15486 140 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 AMMECR1LQ6DCA0 310 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 PVRIGQ6DKI7 326 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 ZNF493Q6ZR52 646 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 C8orf46Q8TAG6 207 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 BLNKQ8WV28 456 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 HARBI1Q96MB7 349 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 SPRY4Q9C004 299 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 VCX2Q9H322 139 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 HIGD1BQ9P298 99 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 RNF114Q9Y508 228 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 NSD1Q96L73 2696 aaPredicted RBP6.49□□□□□ -1.37
CCDC93-208ENST00000474546 MUC21A0A0G2JKD1 596 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 MUC21A0A140T8X8 626 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 A0A1B0GV72 72 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 VSTM5A8MXK1 200 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 G3V4G9 280 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 TNFRSF1AP19438 455 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 KIR2DL2P43627 348 aaPredicted RBP6.48□□□□□ -1.37
CCDC93-208ENST00000474546 KLRB1Q12918 225 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 PDE6HQ13956 83 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 TAL2Q16559 108 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 TIMM23BQ5SRD1 257 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 MUC21Q5SSG8 566 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 FAM120AOSQ5T036 256 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 LCN12Q6JVE5 192 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 C16orf54Q6UWD8 224 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 ERASQ7Z444 233 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 LINC00305Q7Z4B0 112 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 ATOH7Q8N100 152 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 TEX45Q8NA69 505 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 TMEM116Q8NCL8 245 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 OR2K2Q8NGT1 345 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 PRSS3P2Q8NHM4 247 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 SIGLEC8Q9NYZ4 499 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 ZNF835Q9Y2P0 537 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 MXRA5Q9NR99 2828 aa6.48□□□□□ -1.37
CCDC93-208ENST00000474546 TRAV3A0A0B4J244 114 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 PGPA6NDG6 321 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 CRYGCP07315 174 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 CELA3AP09093 270 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 CECR9P0C854 216 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 SAA1P0DJI8 122 aaPredicted RBP6.47□□□□□ -1.37
CCDC93-208ENST00000474546 PSG1P11464 419 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 ZNF137PP52743 207 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 SRSF2Q01130 221 aaKnown RBP6.47□□□□□ -1.37
CCDC93-208ENST00000474546 C3AR1Q16581 482 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 C17orf58Q2M2W7 97 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 TEX36Q5VZQ5 186 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 UFSP1Q6NVU6 142 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 Q6ZR03 302 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 ZNF826PQ6ZT77 177 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 VKORC1L1Q8N0U8 176 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 FER1L6-AS1Q8NA97 138 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 OR9G1Q8NH87 305 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 RNF5Q99942 180 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 ZNF747Q9BV97 191 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 SSBP3Q9BWW4 388 aaPredicted RBP6.47□□□□□ -1.37
CCDC93-208ENST00000474546 PROCRQ9UNN8 238 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 HIGD1AQ9Y241 93 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 USF3Q68DE3 2245 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 HCFC1P51610 2035 aa6.47□□□□□ -1.37
CCDC93-208ENST00000474546 IGLV3-9A0A075B6K5 115 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 IGKV1OR2-108A0A075B7D4 117 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 TMEM189A5PLL7 270 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 TMEM238C9JI98 176 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 SMAD7O15105 426 aaKnown RBP6.46□□□□□ -1.38
CCDC93-208ENST00000474546 HBDP02042 147 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 CELA3BP08861 270 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 FABP6P51161 128 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 CCL11P51671 97 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 ZNF134P52741 427 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 LTC4SQ16873 150 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 HIST2H2BDQ6DRA6 164 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 BHLHA15Q7RTS1 189 aaPredicted RBP6.46□□□□□ -1.38
CCDC93-208ENST00000474546 Q86TA4 180 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 CXorf67Q86X51 503 aaPredicted RBP6.46□□□□□ -1.38
CCDC93-208ENST00000474546 ORMDL3Q8N138 153 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 ZADH2Q8N4Q0 377 aa6.46□□□□□ -1.38
CCDC93-208ENST00000474546 SSBP4Q9BWG4 385 aaPredicted RBP6.46□□□□□ -1.38
CCDC93-208ENST00000474546 SLC25A39Q9BZJ4 359 aaPredicted RBP6.46□□□□□ -1.38
CCDC93-208ENST00000474546 A0A0G2JLM5 398 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 OR2T8A6NH00 312 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 LINC01549A6NIU2 74 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 F8W1H4 67 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 K7EM74 188 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 LYZL6O75951 148 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 MOSP00540 346 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 SMIM13P0DJ93 91 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 BMI1P35226 326 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 SRSF6Q13247 344 aaKnown RBP6.45□□□□□ -1.38
CCDC93-208ENST00000474546 ALKBH6Q3KRA9 238 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 GDF5OSQ5U4N7 250 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 LYRM7Q5U5X0 104 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 ZNF788Q6ZQV5 615 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 Q6ZS92 163 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms